RNA–Protein interactions for RNA: ENST00000488168.5

PNCK-230, Transcript of pregnancy up-regulated nonubiquitous CaM kinase, humanhuman

TSL 3

Gene PNCK, Length 976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNCK-230ENST00000488168 NISCHQ9Y2I1 1504 aa43.66■■■■■ 4.58
PNCK-230ENST00000488168 CCDC180Q9P1Z9 1646 aa39.14■■■■□ 3.86
PNCK-230ENST00000488168 ABCC9O60706 1549 aa38.94■■■■□ 3.82
PNCK-230ENST00000488168 RB1CC1Q8TDY2 1594 aa37.07■■■■□ 3.52
PNCK-230ENST00000488168 NACADO15069 1562 aa36.83■■■■□ 3.49
PNCK-230ENST00000488168 DCAF8L2P0C7V8 631 aa36.72■■■■□ 3.47
PNCK-230ENST00000488168 UNC13AQ9UPW8 1703 aa36.57■■■■□ 3.45
PNCK-230ENST00000488168 MYO15BQ96JP2 1530 aa36.29■■■■□ 3.4
PNCK-230ENST00000488168 DNAJC5BQ9UF47 199 aa36.29■■■■□ 3.4
PNCK-230ENST00000488168 ZCCHC6Q5VYS8 1495 aaKnown RBP36.26■■■■□ 3.4
PNCK-230ENST00000488168 PABPN1Q86U42 306 aaKnown RBP eCLIP36.24■■■■□ 3.392e-6■■■■□ 23
PNCK-230ENST00000488168 BICRAQ9NZM4 1560 aa36.12■■■■□ 3.37
PNCK-230ENST00000488168 DCAF1Q9Y4B6 1507 aa35.98■■■■□ 3.35
PNCK-230ENST00000488168 SCRIBQ14160 1630 aa35.79■■■■□ 3.32
PNCK-230ENST00000488168 SHROOM4Q9ULL8 1493 aa35.35■■■■□ 3.25
PNCK-230ENST00000488168 CC2D2AQ9P2K1 1620 aa35.21■■■■□ 3.23
PNCK-230ENST00000488168 EIF4G1Q04637 1599 aaKnown RBP35.15■■■■□ 3.22
PNCK-230ENST00000488168 CECR2Q9BXF3 1484 aa34.96■■■■□ 3.19
PNCK-230ENST00000488168 SMARCA4P51532 1647 aa34.09■■■■□ 3.05
PNCK-230ENST00000488168 ATAD2BQ9ULI0 1458 aa33.96■■■■□ 3.03
PNCK-230ENST00000488168 NCAPD3P42695 1498 aa33.95■■■■□ 3.02
PNCK-230ENST00000488168 SMARCA2P51531 1590 aa33.85■■■■□ 3.01
PNCK-230ENST00000488168 BAZ1AQ9NRL2 1556 aaPredicted RBP33.85■■■■□ 3.01
PNCK-230ENST00000488168 HMGXB3Q12766 1538 aa33.79■■■■□ 3
PNCK-230ENST00000488168 MROH2BQ7Z745 1585 aa33.73■■■□□ 2.99
PNCK-230ENST00000488168 PEG3Q9GZU2 1588 aa33.66■■■□□ 2.98
PNCK-230ENST00000488168 BAZ1BQ9UIG0 1483 aaKnown RBP33.65■■■□□ 2.98
PNCK-230ENST00000488168 NESP48681 1621 aa33.57■■■□□ 2.96
PNCK-230ENST00000488168 ERCC6Q03468 1493 aa33.5■■■□□ 2.95
PNCK-230ENST00000488168 WIZO95785 1651 aa33.44■■■□□ 2.94
PNCK-230ENST00000488168 CUX2O14529 1486 aa33.3■■■□□ 2.92
PNCK-230ENST00000488168 KIF21AQ7Z4S6 1674 aa33.25■■■□□ 2.91
PNCK-230ENST00000488168 LAMC3Q9Y6N6 1575 aa33.23■■■□□ 2.91
PNCK-230ENST00000488168 THOC2Q8NI27 1593 aaKnown RBP33.19■■■□□ 2.9
PNCK-230ENST00000488168 RSF1Q96T23 1441 aaPredicted RBP33.02■■■□□ 2.88
PNCK-230ENST00000488168 DNAJC5Q9H3Z4 198 aa32.98■■■□□ 2.87
PNCK-230ENST00000488168 CADPSQ9ULU8 1353 aa32.93■■■□□ 2.86
PNCK-230ENST00000488168 PDS5BQ9NTI5 1447 aa32.92■■■□□ 2.86
PNCK-230ENST00000488168 TOP2AP11388 1531 aaKnown RBP32.88■■■□□ 2.85
PNCK-230ENST00000488168 MRC2Q9UBG0 1479 aa32.73■■■□□ 2.83
PNCK-230ENST00000488168 WDR62O43379 1518 aa32.68■■■□□ 2.82
PNCK-230ENST00000488168 CEP164Q9UPV0 1460 aa32.65■■■□□ 2.82
PNCK-230ENST00000488168 CFTRP13569 1480 aa32.64■■■□□ 2.82
PNCK-230ENST00000488168 FANCD2Q9BXW9 1451 aa32.64■■■□□ 2.82
PNCK-230ENST00000488168 PRDM2Q13029 1718 aa32.62■■■□□ 2.81
PNCK-230ENST00000488168 CCDC88BA6NC98 1476 aa32.5■■■□□ 2.79
PNCK-230ENST00000488168 URB2Q14146 1524 aaKnown RBP32.44■■■□□ 2.78
PNCK-230ENST00000488168 TOPBP1Q92547 1522 aa32.09■■■□□ 2.73
PNCK-230ENST00000488168 ZNF608Q9ULD9 1512 aaPredicted RBP32.02■■■□□ 2.72
PNCK-230ENST00000488168 DNMBPQ6XZF7 1577 aa32■■■□□ 2.71
PNCK-230ENST00000488168 IFT140Q96RY7 1462 aa31.93■■■□□ 2.7
PNCK-230ENST00000488168 EIF4G3O43432 1585 aaKnown RBP31.9■■■□□ 2.7
PNCK-230ENST00000488168 TARBP1Q13395 1621 aaKnown RBP31.86■■■□□ 2.69
PNCK-230ENST00000488168 ABCC8Q09428 1581 aa31.85■■■□□ 2.69
PNCK-230ENST00000488168 TRIM41Q8WV44 630 aa31.77■■■□□ 2.68
PNCK-230ENST00000488168 POLA1P09884 1462 aaPredicted RBP31.77■■■□□ 2.68
PNCK-230ENST00000488168 SUPT5HO00267 1087 aaKnown RBP31.76■■■□□ 2.67
PNCK-230ENST00000488168 OSCARQ8IYS5 282 aa31.74■■■□□ 2.67
PNCK-230ENST00000488168 CHD1O14646 1710 aa31.72■■■□□ 2.67
PNCK-230ENST00000488168 RAD54L2Q9Y4B4 1467 aa31.71■■■□□ 2.67
PNCK-230ENST00000488168 AQRO60306 1485 aaKnown RBP eCLIP31.7■■■□□ 2.665e-8■■■■■ 27.6
PNCK-230ENST00000488168 CUX1P39880 1505 aa31.69■■■□□ 2.66
PNCK-230ENST00000488168 FGD5Q6ZNL6 1462 aa31.63■■■□□ 2.65
PNCK-230ENST00000488168 RIMBP3CA6NJZ7 1639 aa31.59■■■□□ 2.65
PNCK-230ENST00000488168 RIMBP3BA6NNM3 1639 aa31.59■■■□□ 2.65
PNCK-230ENST00000488168 RIMBP3Q9UFD9 1639 aa31.59■■■□□ 2.65
PNCK-230ENST00000488168 SOGA1O94964 1423 aa31.55■■■□□ 2.64
PNCK-230ENST00000488168 WDR97A6NE52 1622 aa31.53■■■□□ 2.64
PNCK-230ENST00000488168 TDRD9Q8NDG6 1382 aaKnown RBP31.51■■■□□ 2.63
PNCK-230ENST00000488168 ARHGEF11O15085 1522 aa31.43■■■□□ 2.62
PNCK-230ENST00000488168 PBRM1Q86U86 1689 aa31.41■■■□□ 2.62
PNCK-230ENST00000488168 SNAPC4Q5SXM2 1469 aa31.4■■■□□ 2.62
PNCK-230ENST00000488168 FBLN2P98095 1184 aa31.37■■■□□ 2.61
PNCK-230ENST00000488168 ABCA5Q8WWZ7 1642 aa31.27■■■□□ 2.6
PNCK-230ENST00000488168 SYNJ1O43426 1573 aa31.27■■■□□ 2.6
PNCK-230ENST00000488168 BIVM-ERCC5R4GMW8 1640 aa31.27■■■□□ 2.6
PNCK-230ENST00000488168 GRIN2BQ13224 1484 aa31.25■■■□□ 2.59
PNCK-230ENST00000488168 MAGI1Q96QZ7 1491 aaPredicted RBP31.22■■■□□ 2.59
PNCK-230ENST00000488168 ABCA10Q8WWZ4 1543 aa31.21■■■□□ 2.59
PNCK-230ENST00000488168 GAPVD1Q14C86 1478 aa31.21■■■□□ 2.59
PNCK-230ENST00000488168 TOP2BQ02880 1626 aa31.2■■■□□ 2.58
PNCK-230ENST00000488168 CLASP1Q7Z460 1538 aa31.19■■■□□ 2.58
PNCK-230ENST00000488168 ARAP1Q96P48 1450 aa31.15■■■□□ 2.58
PNCK-230ENST00000488168 SYNJ2O15056 1496 aa31.13■■■□□ 2.57
PNCK-230ENST00000488168 WRNQ14191 1432 aaPredicted RBP eCLIP31.12■■■□□ 2.57
PNCK-230ENST00000488168 CHMP7Q8WUX9 453 aaPredicted RBP31.1■■■□□ 2.57
PNCK-230ENST00000488168 CYB5RLQ6IPT4 315 aa31.09■■■□□ 2.57
PNCK-230ENST00000488168 ADAMTS12P58397 1594 aa31.01■■■□□ 2.56
PNCK-230ENST00000488168 GRIN2AQ12879 1464 aa30.9■■■□□ 2.54
PNCK-230ENST00000488168 CEP170Q5SW79 1584 aa30.89■■■□□ 2.54
PNCK-230ENST00000488168 ERCC6L2Q5T890 1561 aa30.85■■■□□ 2.53
PNCK-230ENST00000488168 ERICH3Q5RHP9 1530 aa30.82■■■□□ 2.52
PNCK-230ENST00000488168 FHAD1B1AJZ9 1412 aa30.77■■■□□ 2.52
PNCK-230ENST00000488168 NUP160Q12769 1436 aa30.75■■■□□ 2.51
PNCK-230ENST00000488168 SHROOM2Q13796 1616 aa30.7■■■□□ 2.51
PNCK-230ENST00000488168 TRHP20396 242 aaPredicted RBP30.65■■■□□ 2.5
PNCK-230ENST00000488168 RUSC2Q8N2Y8 1516 aa30.58■■■□□ 2.49
PNCK-230ENST00000488168 CUL7Q14999 1698 aa30.49■■■□□ 2.47
PNCK-230ENST00000488168 KIF27Q86VH2 1401 aa30.46■■■□□ 2.47
PNCK-230ENST00000488168 PRG4Q92954 1404 aaPredicted RBP30.45■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms