RNA–Protein interactions for RNA: ENST00000439096.2

BBC3-203, Transcript of BCL2 binding component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BBC3, Length 1,838 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBC3-203ENST00000439096 NISCHQ9Y2I1 1504 aa52.14■■■■■ 5.94
BBC3-203ENST00000439096 CCDC180Q9P1Z9 1646 aa45.32■■■■■ 4.85
BBC3-203ENST00000439096 ZCCHC6Q5VYS8 1495 aaKnown RBP43.89■■■■■ 4.62
BBC3-203ENST00000439096 DCAF1Q9Y4B6 1507 aa43.12■■■■■ 4.49
BBC3-203ENST00000439096 DCAF8L2P0C7V8 631 aa42.92■■■■■ 4.46
BBC3-203ENST00000439096 SHROOM4Q9ULL8 1493 aa42.81■■■■■ 4.44
BBC3-203ENST00000439096 ABCC9O60706 1549 aa42.46■■■■■ 4.39
BBC3-203ENST00000439096 MYO15BQ96JP2 1530 aa42.45■■■■■ 4.39
BBC3-203ENST00000439096 NACADO15069 1562 aa42.09■■■■■ 4.33
BBC3-203ENST00000439096 SCRIBQ14160 1630 aa41.72■■■■■ 4.27
BBC3-203ENST00000439096 RB1CC1Q8TDY2 1594 aa41.64■■■■■ 4.26
BBC3-203ENST00000439096 SUPT5HO00267 1087 aaKnown RBP41.39■■■■■ 4.22
BBC3-203ENST00000439096 UNC13AQ9UPW8 1703 aa40.9■■■■■ 4.14
BBC3-203ENST00000439096 RSF1Q96T23 1441 aaPredicted RBP40.59■■■■■ 4.09
BBC3-203ENST00000439096 CECR2Q9BXF3 1484 aa40.49■■■■■ 4.07
BBC3-203ENST00000439096 BICRAQ9NZM4 1560 aa40.39■■■■■ 4.06
BBC3-203ENST00000439096 MROH2BQ7Z745 1585 aa40.31■■■■■ 4.04
BBC3-203ENST00000439096 BAZ1AQ9NRL2 1556 aaPredicted RBP40.23■■■■■ 4.03
BBC3-203ENST00000439096 PABPN1Q86U42 306 aaKnown RBP eCLIP40.12■■■■■ 4.01
BBC3-203ENST00000439096 WIZO95785 1651 aa40.03■■■■■ 4
BBC3-203ENST00000439096 SMARCA4P51532 1647 aa40.02■■■■■ 4
BBC3-203ENST00000439096 CHIC1Q5VXU3 224 aa39.84■■■■□ 3.97
BBC3-203ENST00000439096 TOP2AP11388 1531 aaKnown RBP39.6■■■■□ 3.93
BBC3-203ENST00000439096 PEG3Q9GZU2 1588 aa39.51■■■■□ 3.92
BBC3-203ENST00000439096 SMARCA2P51531 1590 aa39.26■■■■□ 3.87
BBC3-203ENST00000439096 ATAD2BQ9ULI0 1458 aa39.24■■■■□ 3.87
BBC3-203ENST00000439096 CCDC88BA6NC98 1476 aa39.19■■■■□ 3.86
BBC3-203ENST00000439096 EIF4G1Q04637 1599 aaKnown RBP39.13■■■■□ 3.85
BBC3-203ENST00000439096 BAZ1BQ9UIG0 1483 aaKnown RBP39.04■■■■□ 3.84
BBC3-203ENST00000439096 TRIM41Q8WV44 630 aa38.89■■■■□ 3.82
BBC3-203ENST00000439096 NCAPD3P42695 1498 aa38.83■■■■□ 3.81
BBC3-203ENST00000439096 HMGXB3Q12766 1538 aa38.82■■■■□ 3.8
BBC3-203ENST00000439096 ABCC8Q09428 1581 aa38.52■■■■□ 3.76
BBC3-203ENST00000439096 CC2D2AQ9P2K1 1620 aa38.46■■■■□ 3.75
BBC3-203ENST00000439096 LOC105371045A0A1W2PR82 267 aa38.33■■■■□ 3.73
BBC3-203ENST00000439096 WRNQ14191 1432 aaPredicted RBP eCLIP38.21■■■■□ 3.715e-6■■■■■ 46
BBC3-203ENST00000439096 FAM9AQ8IZU1 332 aaPredicted RBP38.19■■■■□ 3.7
BBC3-203ENST00000439096 CFTRP13569 1480 aa38.08■■■■□ 3.69
BBC3-203ENST00000439096 SYNJ1O43426 1573 aa38.05■■■■□ 3.68
BBC3-203ENST00000439096 PRDM2Q13029 1718 aa38.01■■■■□ 3.68
BBC3-203ENST00000439096 EEA1Q15075 1411 aa37.87■■■■□ 3.65
BBC3-203ENST00000439096 TOP2BQ02880 1626 aa37.87■■■■□ 3.65
BBC3-203ENST00000439096 SOGA1O94964 1423 aa37.86■■■■□ 3.65
BBC3-203ENST00000439096 CADPSQ9ULU8 1353 aa37.85■■■■□ 3.65
BBC3-203ENST00000439096 BIVM-ERCC5R4GMW8 1640 aa37.84■■■■□ 3.65
BBC3-203ENST00000439096 RUSC2Q8N2Y8 1516 aa37.7■■■■□ 3.63
BBC3-203ENST00000439096 CUX1P39880 1505 aa37.66■■■■□ 3.62
BBC3-203ENST00000439096 EHMT2Q96KQ7 1210 aa37.63■■■■□ 3.61
BBC3-203ENST00000439096 CSRNP3Q8WYN3 585 aa37.62■■■■□ 3.61
BBC3-203ENST00000439096 LAMC3Q9Y6N6 1575 aa37.46■■■■□ 3.59
BBC3-203ENST00000439096 FANCD2Q9BXW9 1451 aa37.45■■■■□ 3.59
BBC3-203ENST00000439096 NESP48681 1621 aa37.41■■■■□ 3.58
BBC3-203ENST00000439096 KIF21BO75037 1637 aa37.39■■■■□ 3.58
BBC3-203ENST00000439096 GOLGA3Q08378 1498 aa37.38■■■■□ 3.57
BBC3-203ENST00000439096 CEP164Q9UPV0 1460 aa37.34■■■■□ 3.57
BBC3-203ENST00000439096 TNIKQ9UKE5 1360 aa37.33■■■■□ 3.57
BBC3-203ENST00000439096 DNAJC5BQ9UF47 199 aa37.31■■■■□ 3.56
BBC3-203ENST00000439096 DNMBPQ6XZF7 1577 aa37.21■■■■□ 3.55
BBC3-203ENST00000439096 KIF27Q86VH2 1401 aa37.21■■■■□ 3.55
BBC3-203ENST00000439096 FGD5Q6ZNL6 1462 aa37.19■■■■□ 3.54
BBC3-203ENST00000439096 UBTFP17480 764 aaKnown RBP37.18■■■■□ 3.54
BBC3-203ENST00000439096 CEP162Q5TB80 1403 aa37.16■■■■□ 3.54
BBC3-203ENST00000439096 PDS5BQ9NTI5 1447 aa37.14■■■■□ 3.54
BBC3-203ENST00000439096 TOPBP1Q92547 1522 aa37.1■■■■□ 3.53
BBC3-203ENST00000439096 RAPGEF2Q9Y4G8 1499 aa37.07■■■■□ 3.53
BBC3-203ENST00000439096 ERICH3Q5RHP9 1530 aa37.06■■■■□ 3.52
BBC3-203ENST00000439096 PRXQ9BXM0 1461 aa37.05■■■■□ 3.52
BBC3-203ENST00000439096 KIF21AQ7Z4S6 1674 aa37.02■■■■□ 3.52
BBC3-203ENST00000439096 CUX2O14529 1486 aa37.01■■■■□ 3.52
BBC3-203ENST00000439096 PCGF6Q9BYE7 350 aa36.99■■■■□ 3.51
BBC3-203ENST00000439096 URB2Q14146 1524 aaKnown RBP36.97■■■■□ 3.51
BBC3-203ENST00000439096 POLA1P09884 1462 aaPredicted RBP36.95■■■■□ 3.51
BBC3-203ENST00000439096 TRIM26Q12899 539 aaPredicted RBP36.91■■■■□ 3.5
BBC3-203ENST00000439096 ABCA10Q8WWZ4 1543 aa36.86■■■■□ 3.49
BBC3-203ENST00000439096 RAD54L2Q9Y4B4 1467 aa36.83■■■■□ 3.49
BBC3-203ENST00000439096 IGF1RP08069 1367 aa36.82■■■■□ 3.48
BBC3-203ENST00000439096 CLIP1P30622 1438 aa36.78■■■■□ 3.48
BBC3-203ENST00000439096 WDR97A6NE52 1622 aa36.76■■■■□ 3.48
BBC3-203ENST00000439096 CARMIL1Q5VZK9 1371 aa36.65■■■■□ 3.46
BBC3-203ENST00000439096 MRC2Q9UBG0 1479 aa36.65■■■■□ 3.46
BBC3-203ENST00000439096 ABCA5Q8WWZ7 1642 aa36.56■■■■□ 3.44
BBC3-203ENST00000439096 CUL7Q14999 1698 aa36.56■■■■□ 3.44
BBC3-203ENST00000439096 TARBP1Q13395 1621 aaKnown RBP36.53■■■■□ 3.44
BBC3-203ENST00000439096 VPS8Q8N3P4 1428 aa36.52■■■■□ 3.44
BBC3-203ENST00000439096 PPARGC1BQ86YN6 1023 aaKnown RBP36.49■■■■□ 3.43
BBC3-203ENST00000439096 WDR62O43379 1518 aa36.45■■■■□ 3.43
BBC3-203ENST00000439096 RANGAP1P46060 587 aaPredicted RBP36.45■■■■□ 3.43
BBC3-203ENST00000439096 GAPVD1Q14C86 1478 aa36.43■■■■□ 3.42
BBC3-203ENST00000439096 TDRD9Q8NDG6 1382 aaKnown RBP36.42■■■■□ 3.42
BBC3-203ENST00000439096 ARAP1Q96P48 1450 aa36.38■■■■□ 3.41
BBC3-203ENST00000439096 ERCC6Q03468 1493 aa36.36■■■■□ 3.41
BBC3-203ENST00000439096 ARHGAP35Q9NRY4 1499 aa36.3■■■■□ 3.4
BBC3-203ENST00000439096 HRCP23327 699 aa36.27■■■■□ 3.4
BBC3-203ENST00000439096 IFT140Q96RY7 1462 aa36.26■■■■□ 3.4
BBC3-203ENST00000439096 THOC2Q8NI27 1593 aaKnown RBP36.26■■■■□ 3.4
BBC3-203ENST00000439096 PBRM1Q86U86 1689 aa36.26■■■■□ 3.4
BBC3-203ENST00000439096 CTTNBP2Q8WZ74 1663 aa36.24■■■■□ 3.39
BBC3-203ENST00000439096 APLP2Q06481 763 aa36.17■■■■□ 3.38
BBC3-203ENST00000439096 AQRO60306 1485 aaKnown RBP eCLIP36.13■■■■□ 3.372e-8■■■□□ 18.9
BBC3-203ENST00000439096 TTBK1Q5TCY1 1321 aaPredicted RBP36.12■■■■□ 3.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms