RNA–Protein interactions for RNA: ENST00000494172.1

FAM178B-205, Transcript of family with sequence similarity 178 member B, humanhuman

TSL 3

Gene FAM178B, Length 592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM178B-205ENST00000494172 NISCHQ9Y2I1 1504 aa44.01■■■■■ 4.64
FAM178B-205ENST00000494172 CCDC180Q9P1Z9 1646 aa39.22■■■■□ 3.87
FAM178B-205ENST00000494172 ABCC9O60706 1549 aa38.22■■■■□ 3.71
FAM178B-205ENST00000494172 RB1CC1Q8TDY2 1594 aa36.84■■■■□ 3.49
FAM178B-205ENST00000494172 NACADO15069 1562 aa36.82■■■■□ 3.48
FAM178B-205ENST00000494172 ZCCHC6Q5VYS8 1495 aaKnown RBP36.7■■■■□ 3.47
FAM178B-205ENST00000494172 MYO15BQ96JP2 1530 aa36.65■■■■□ 3.46
FAM178B-205ENST00000494172 DCAF8L2P0C7V8 631 aa36.5■■■■□ 3.43
FAM178B-205ENST00000494172 DCAF1Q9Y4B6 1507 aa36.49■■■■□ 3.43
FAM178B-205ENST00000494172 UNC13AQ9UPW8 1703 aa36.03■■■■□ 3.36
FAM178B-205ENST00000494172 BICRAQ9NZM4 1560 aa35.76■■■■□ 3.31
FAM178B-205ENST00000494172 SCRIBQ14160 1630 aa35.68■■■■□ 3.3
FAM178B-205ENST00000494172 PABPN1Q86U42 306 aaKnown RBP eCLIP35.62■■■■□ 3.29
FAM178B-205ENST00000494172 SHROOM4Q9ULL8 1493 aa35.45■■■■□ 3.27
FAM178B-205ENST00000494172 DNAJC5BQ9UF47 199 aa35.03■■■■□ 3.2
FAM178B-205ENST00000494172 EIF4G1Q04637 1599 aaKnown RBP34.79■■■■□ 3.16
FAM178B-205ENST00000494172 CC2D2AQ9P2K1 1620 aa34.63■■■■□ 3.13
FAM178B-205ENST00000494172 CECR2Q9BXF3 1484 aa34.36■■■■□ 3.09
FAM178B-205ENST00000494172 SMARCA4P51532 1647 aa34.17■■■■□ 3.06
FAM178B-205ENST00000494172 BAZ1AQ9NRL2 1556 aaPredicted RBP34.12■■■■□ 3.05
FAM178B-205ENST00000494172 ATAD2BQ9ULI0 1458 aa33.95■■■■□ 3.03
FAM178B-205ENST00000494172 NCAPD3P42695 1498 aa33.95■■■■□ 3.02
FAM178B-205ENST00000494172 SMARCA2P51531 1590 aa33.94■■■■□ 3.02
FAM178B-205ENST00000494172 MROH2BQ7Z745 1585 aa33.9■■■■□ 3.02
FAM178B-205ENST00000494172 PEG3Q9GZU2 1588 aa33.89■■■■□ 3.02
FAM178B-205ENST00000494172 HMGXB3Q12766 1538 aa33.84■■■■□ 3.01
FAM178B-205ENST00000494172 BAZ1BQ9UIG0 1483 aaKnown RBP33.66■■■□□ 2.98
FAM178B-205ENST00000494172 WIZO95785 1651 aa33.53■■■□□ 2.96
FAM178B-205ENST00000494172 RSF1Q96T23 1441 aaPredicted RBP33.5■■■□□ 2.95
FAM178B-205ENST00000494172 TOP2AP11388 1531 aaKnown RBP33.23■■■□□ 2.91
FAM178B-205ENST00000494172 NESP48681 1621 aa33.09■■■□□ 2.89
FAM178B-205ENST00000494172 LAMC3Q9Y6N6 1575 aa33.08■■■□□ 2.89
FAM178B-205ENST00000494172 ERCC6Q03468 1493 aa32.93■■■□□ 2.86
FAM178B-205ENST00000494172 CADPSQ9ULU8 1353 aa32.91■■■□□ 2.86
FAM178B-205ENST00000494172 PDS5BQ9NTI5 1447 aa32.78■■■□□ 2.84
FAM178B-205ENST00000494172 CFTRP13569 1480 aa32.77■■■□□ 2.84
FAM178B-205ENST00000494172 CCDC88BA6NC98 1476 aa32.76■■■□□ 2.84
FAM178B-205ENST00000494172 KIF21AQ7Z4S6 1674 aa32.75■■■□□ 2.83
FAM178B-205ENST00000494172 THOC2Q8NI27 1593 aaKnown RBP32.69■■■□□ 2.82
FAM178B-205ENST00000494172 CUX2O14529 1486 aa32.67■■■□□ 2.82
FAM178B-205ENST00000494172 PRDM2Q13029 1718 aa32.58■■■□□ 2.81
FAM178B-205ENST00000494172 FANCD2Q9BXW9 1451 aa32.55■■■□□ 2.8
FAM178B-205ENST00000494172 CEP164Q9UPV0 1460 aa32.54■■■□□ 2.8
FAM178B-205ENST00000494172 MRC2Q9UBG0 1479 aa32.48■■■□□ 2.79
FAM178B-205ENST00000494172 SUPT5HO00267 1087 aaKnown RBP32.47■■■□□ 2.79
FAM178B-205ENST00000494172 WDR62O43379 1518 aa32.43■■■□□ 2.78
FAM178B-205ENST00000494172 URB2Q14146 1524 aaKnown RBP32.25■■■□□ 2.75
FAM178B-205ENST00000494172 TOPBP1Q92547 1522 aa32.05■■■□□ 2.72
FAM178B-205ENST00000494172 ABCC8Q09428 1581 aa32.05■■■□□ 2.72
FAM178B-205ENST00000494172 DNMBPQ6XZF7 1577 aa32.04■■■□□ 2.72
FAM178B-205ENST00000494172 IFT140Q96RY7 1462 aa31.84■■■□□ 2.69
FAM178B-205ENST00000494172 CUX1P39880 1505 aa31.82■■■□□ 2.68
FAM178B-205ENST00000494172 POLA1P09884 1462 aaPredicted RBP31.78■■■□□ 2.68
FAM178B-205ENST00000494172 TARBP1Q13395 1621 aaKnown RBP31.75■■■□□ 2.67
FAM178B-205ENST00000494172 FGD5Q6ZNL6 1462 aa31.69■■■□□ 2.66
FAM178B-205ENST00000494172 ZNF608Q9ULD9 1512 aaPredicted RBP31.69■■■□□ 2.66
FAM178B-205ENST00000494172 EIF4G3O43432 1585 aaKnown RBP31.63■■■□□ 2.65
FAM178B-205ENST00000494172 BIVM-ERCC5R4GMW8 1640 aa31.59■■■□□ 2.65
FAM178B-205ENST00000494172 RAD54L2Q9Y4B4 1467 aa31.59■■■□□ 2.65
FAM178B-205ENST00000494172 SOGA1O94964 1423 aa31.58■■■□□ 2.65
FAM178B-205ENST00000494172 WRNQ14191 1432 aaPredicted RBP eCLIP31.57■■■□□ 2.642e-6■■■□□ 19.1
FAM178B-205ENST00000494172 TOP2BQ02880 1626 aa31.57■■■□□ 2.64
FAM178B-205ENST00000494172 DNAJC5Q9H3Z4 198 aa31.56■■■□□ 2.64
FAM178B-205ENST00000494172 SYNJ1O43426 1573 aa31.54■■■□□ 2.64
FAM178B-205ENST00000494172 WDR97A6NE52 1622 aa31.53■■■□□ 2.64
FAM178B-205ENST00000494172 AQRO60306 1485 aaKnown RBP eCLIP31.46■■■□□ 2.635e-9■■■■□ 22
FAM178B-205ENST00000494172 ABCA10Q8WWZ4 1543 aa31.41■■■□□ 2.62
FAM178B-205ENST00000494172 TDRD9Q8NDG6 1382 aaKnown RBP31.39■■■□□ 2.62
FAM178B-205ENST00000494172 ABCA5Q8WWZ7 1642 aa31.34■■■□□ 2.61
FAM178B-205ENST00000494172 GRIN2BQ13224 1484 aa31.27■■■□□ 2.6
FAM178B-205ENST00000494172 PBRM1Q86U86 1689 aa31.25■■■□□ 2.59
FAM178B-205ENST00000494172 GAPVD1Q14C86 1478 aa31.25■■■□□ 2.59
FAM178B-205ENST00000494172 SNAPC4Q5SXM2 1469 aa31.22■■■□□ 2.59
FAM178B-205ENST00000494172 MAGI1Q96QZ7 1491 aaPredicted RBP31.21■■■□□ 2.59
FAM178B-205ENST00000494172 CHD1O14646 1710 aa31.2■■■□□ 2.58
FAM178B-205ENST00000494172 OSCARQ8IYS5 282 aa31.17■■■□□ 2.58
FAM178B-205ENST00000494172 SYNJ2O15056 1496 aa31.08■■■□□ 2.57
FAM178B-205ENST00000494172 ERICH3Q5RHP9 1530 aa31.04■■■□□ 2.56
FAM178B-205ENST00000494172 ADAMTS12P58397 1594 aa31.02■■■□□ 2.56
FAM178B-205ENST00000494172 FBLN2P98095 1184 aa30.97■■■□□ 2.55
FAM178B-205ENST00000494172 CHMP7Q8WUX9 453 aaPredicted RBP30.93■■■□□ 2.54
FAM178B-205ENST00000494172 FHAD1B1AJZ9 1412 aa30.9■■■□□ 2.54
FAM178B-205ENST00000494172 KIF27Q86VH2 1401 aa30.9■■■□□ 2.54
FAM178B-205ENST00000494172 CLASP1Q7Z460 1538 aa30.89■■■□□ 2.54
FAM178B-205ENST00000494172 GRIN2AQ12879 1464 aa30.89■■■□□ 2.53
FAM178B-205ENST00000494172 RIMBP3CA6NJZ7 1639 aa30.8■■■□□ 2.52
FAM178B-205ENST00000494172 RIMBP3BA6NNM3 1639 aa30.8■■■□□ 2.52
FAM178B-205ENST00000494172 RIMBP3Q9UFD9 1639 aa30.8■■■□□ 2.52
FAM178B-205ENST00000494172 ARHGEF11O15085 1522 aa30.79■■■□□ 2.52
FAM178B-205ENST00000494172 CUL7Q14999 1698 aa30.78■■■□□ 2.52
FAM178B-205ENST00000494172 NUP160Q12769 1436 aa30.76■■■□□ 2.51
FAM178B-205ENST00000494172 IGF1RP08069 1367 aa30.76■■■□□ 2.51
FAM178B-205ENST00000494172 CEP170Q5SW79 1584 aa30.75■■■□□ 2.51
FAM178B-205ENST00000494172 TRIM41Q8WV44 630 aa30.7■■■□□ 2.51
FAM178B-205ENST00000494172 RUSC2Q8N2Y8 1516 aa30.6■■■□□ 2.49
FAM178B-205ENST00000494172 SHROOM2Q13796 1616 aa30.57■■■□□ 2.48
FAM178B-205ENST00000494172 CARMIL1Q5VZK9 1371 aa30.56■■■□□ 2.48
FAM178B-205ENST00000494172 ARAP1Q96P48 1450 aa30.55■■■□□ 2.48
FAM178B-205ENST00000494172 KIAA0586Q9BVV6 1533 aa30.43■■■□□ 2.46
FAM178B-205ENST00000494172 RAPGEF2Q9Y4G8 1499 aa30.43■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms