RNA–Protein interactions for RNA: ENST00000371443.5

MRPL41-201, Transcript of mitochondrial ribosomal protein L41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL41, Length 1,262 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL41-201ENST00000371443 NISCHQ9Y2I1 1504 aa55.59■■■■■ 6.49
MRPL41-201ENST00000371443 CCDC180Q9P1Z9 1646 aa49.93■■■■■ 5.58
MRPL41-201ENST00000371443 ABCC9O60706 1549 aa49.88■■■■■ 5.58
MRPL41-201ENST00000371443 RB1CC1Q8TDY2 1594 aa47.49■■■■■ 5.19
MRPL41-201ENST00000371443 NACADO15069 1562 aa47.16■■■■■ 5.14
MRPL41-201ENST00000371443 DCAF8L2P0C7V8 631 aa46.87■■■■■ 5.09
MRPL41-201ENST00000371443 DNAJC5BQ9UF47 199 aa46.71■■■■■ 5.07
MRPL41-201ENST00000371443 MYO15BQ96JP2 1530 aa46.5■■■■■ 5.03
MRPL41-201ENST00000371443 UNC13AQ9UPW8 1703 aa46.46■■■■■ 5.03
MRPL41-201ENST00000371443 PABPN1Q86U42 306 aaKnown RBP eCLIP46.41■■■■■ 5.02
MRPL41-201ENST00000371443 BICRAQ9NZM4 1560 aa46.11■■■■■ 4.97
MRPL41-201ENST00000371443 ZCCHC6Q5VYS8 1495 aaKnown RBP46.1■■■■■ 4.97
MRPL41-201ENST00000371443 DCAF1Q9Y4B6 1507 aa45.92■■■■■ 4.94
MRPL41-201ENST00000371443 SCRIBQ14160 1630 aa45.51■■■■■ 4.88
MRPL41-201ENST00000371443 SHROOM4Q9ULL8 1493 aa45.49■■■■■ 4.87
MRPL41-201ENST00000371443 CC2D2AQ9P2K1 1620 aa45.08■■■■■ 4.81
MRPL41-201ENST00000371443 EIF4G1Q04637 1599 aaKnown RBP44.99■■■■■ 4.79
MRPL41-201ENST00000371443 CECR2Q9BXF3 1484 aa44.92■■■■■ 4.78
MRPL41-201ENST00000371443 NCAPD3P42695 1498 aa43.51■■■■■ 4.56
MRPL41-201ENST00000371443 ATAD2BQ9ULI0 1458 aa43.4■■■■■ 4.54
MRPL41-201ENST00000371443 SMARCA4P51532 1647 aa43.4■■■■■ 4.54
MRPL41-201ENST00000371443 SMARCA2P51531 1590 aa43.29■■■■■ 4.52
MRPL41-201ENST00000371443 HMGXB3Q12766 1538 aa43.23■■■■■ 4.51
MRPL41-201ENST00000371443 BAZ1AQ9NRL2 1556 aaPredicted RBP43.17■■■■■ 4.5
MRPL41-201ENST00000371443 ERCC6Q03468 1493 aa43.07■■■■■ 4.49
MRPL41-201ENST00000371443 BAZ1BQ9UIG0 1483 aaKnown RBP43■■■■■ 4.47
MRPL41-201ENST00000371443 CUX2O14529 1486 aa42.98■■■■■ 4.47
MRPL41-201ENST00000371443 PEG3Q9GZU2 1588 aa42.96■■■■■ 4.47
MRPL41-201ENST00000371443 DNAJC5Q9H3Z4 198 aa42.87■■■■■ 4.45
MRPL41-201ENST00000371443 NESP48681 1621 aa42.85■■■■■ 4.45
MRPL41-201ENST00000371443 MROH2BQ7Z745 1585 aa42.84■■■■■ 4.45
MRPL41-201ENST00000371443 LAMC3Q9Y6N6 1575 aa42.56■■■■■ 4.4
MRPL41-201ENST00000371443 THOC2Q8NI27 1593 aaKnown RBP42.45■■■■■ 4.39
MRPL41-201ENST00000371443 WIZO95785 1651 aa42.35■■■■■ 4.37
MRPL41-201ENST00000371443 KIF21AQ7Z4S6 1674 aa42.35■■■■■ 4.37
MRPL41-201ENST00000371443 PDS5BQ9NTI5 1447 aa42.29■■■■■ 4.36
MRPL41-201ENST00000371443 CADPSQ9ULU8 1353 aa42.18■■■■■ 4.34
MRPL41-201ENST00000371443 MRC2Q9UBG0 1479 aa41.95■■■■■ 4.31
MRPL41-201ENST00000371443 RSF1Q96T23 1441 aaPredicted RBP41.95■■■■■ 4.31
MRPL41-201ENST00000371443 WDR62O43379 1518 aa41.86■■■■■ 4.29
MRPL41-201ENST00000371443 TOP2AP11388 1531 aaKnown RBP41.82■■■■■ 4.29
MRPL41-201ENST00000371443 CEP164Q9UPV0 1460 aa41.79■■■■■ 4.28
MRPL41-201ENST00000371443 FANCD2Q9BXW9 1451 aa41.74■■■■■ 4.27
MRPL41-201ENST00000371443 CFTRP13569 1480 aa41.72■■■■■ 4.27
MRPL41-201ENST00000371443 URB2Q14146 1524 aaKnown RBP41.4■■■■■ 4.22
MRPL41-201ENST00000371443 PRDM2Q13029 1718 aa41.38■■■■■ 4.22
MRPL41-201ENST00000371443 CCDC88BA6NC98 1476 aa41.31■■■■■ 4.2
MRPL41-201ENST00000371443 TRIM41Q8WV44 630 aa41.04■■■■■ 4.16
MRPL41-201ENST00000371443 OSCARQ8IYS5 282 aa40.96■■■■■ 4.15
MRPL41-201ENST00000371443 TOPBP1Q92547 1522 aa40.96■■■■■ 4.15
MRPL41-201ENST00000371443 IFT140Q96RY7 1462 aa40.95■■■■■ 4.15
MRPL41-201ENST00000371443 ZNF608Q9ULD9 1512 aaPredicted RBP40.89■■■■■ 4.14
MRPL41-201ENST00000371443 ABCC8Q09428 1581 aa40.85■■■■■ 4.13
MRPL41-201ENST00000371443 DNMBPQ6XZF7 1577 aa40.82■■■■■ 4.13
MRPL41-201ENST00000371443 EIF4G3O43432 1585 aaKnown RBP40.7■■■■■ 4.11
MRPL41-201ENST00000371443 TARBP1Q13395 1621 aaKnown RBP40.6■■■■■ 4.09
MRPL41-201ENST00000371443 POLA1P09884 1462 aaPredicted RBP40.54■■■■■ 4.08
MRPL41-201ENST00000371443 RIMBP3CA6NJZ7 1639 aa40.51■■■■■ 4.08
MRPL41-201ENST00000371443 RIMBP3BA6NNM3 1639 aa40.51■■■■■ 4.08
MRPL41-201ENST00000371443 RIMBP3Q9UFD9 1639 aa40.51■■■■■ 4.08
MRPL41-201ENST00000371443 AQRO60306 1485 aaKnown RBP eCLIP40.5■■■■■ 4.07
MRPL41-201ENST00000371443 CHD1O14646 1710 aa40.4■■■■■ 4.06
MRPL41-201ENST00000371443 RAD54L2Q9Y4B4 1467 aa40.39■■■■■ 4.06
MRPL41-201ENST00000371443 ARHGEF11O15085 1522 aa40.37■■■■■ 4.05
MRPL41-201ENST00000371443 SOGA1O94964 1423 aa40.33■■■■■ 4.05
MRPL41-201ENST00000371443 FGD5Q6ZNL6 1462 aa40.3■■■■■ 4.04
MRPL41-201ENST00000371443 CUX1P39880 1505 aa40.26■■■■■ 4.04
MRPL41-201ENST00000371443 TDRD9Q8NDG6 1382 aaKnown RBP40.24■■■■■ 4.03
MRPL41-201ENST00000371443 FBLN2P98095 1184 aa40.22■■■■■ 4.03
MRPL41-201ENST00000371443 WDR97A6NE52 1622 aa40.2■■■■■ 4.03
MRPL41-201ENST00000371443 SNAPC4Q5SXM2 1469 aa40.12■■■■■ 4.01
MRPL41-201ENST00000371443 SUPT5HO00267 1087 aaKnown RBP40.08■■■■■ 4.01
MRPL41-201ENST00000371443 CYB5RLQ6IPT4 315 aa40.02■■■■■ 4
MRPL41-201ENST00000371443 MAGI1Q96QZ7 1491 aaPredicted RBP40■■■■□ 3.99
MRPL41-201ENST00000371443 GRIN2BQ13224 1484 aa40■■■■□ 3.99
MRPL41-201ENST00000371443 ARAP1Q96P48 1450 aa39.97■■■■□ 3.99
MRPL41-201ENST00000371443 CHMP7Q8WUX9 453 aaPredicted RBP39.92■■■■□ 3.98
MRPL41-201ENST00000371443 CLASP1Q7Z460 1538 aa39.91■■■■□ 3.98
MRPL41-201ENST00000371443 PBRM1Q86U86 1689 aa39.89■■■■□ 3.98
MRPL41-201ENST00000371443 SYNJ1O43426 1573 aa39.89■■■■□ 3.98
MRPL41-201ENST00000371443 SYNJ2O15056 1496 aa39.87■■■■□ 3.97
MRPL41-201ENST00000371443 GAPVD1Q14C86 1478 aa39.86■■■■□ 3.97
MRPL41-201ENST00000371443 ABCA10Q8WWZ4 1543 aa39.83■■■■□ 3.97
MRPL41-201ENST00000371443 ABCA5Q8WWZ7 1642 aa39.8■■■■□ 3.96
MRPL41-201ENST00000371443 WRNQ14191 1432 aaPredicted RBP eCLIP39.65■■■■□ 3.94
MRPL41-201ENST00000371443 BIVM-ERCC5R4GMW8 1640 aa39.65■■■■□ 3.94
MRPL41-201ENST00000371443 TOP2BQ02880 1626 aa39.63■■■■□ 3.93
MRPL41-201ENST00000371443 TRHP20396 242 aaPredicted RBP39.58■■■■□ 3.93
MRPL41-201ENST00000371443 ADAMTS12P58397 1594 aa39.5■■■■□ 3.91
MRPL41-201ENST00000371443 GRIN2AQ12879 1464 aa39.49■■■■□ 3.91
MRPL41-201ENST00000371443 CEP170Q5SW79 1584 aa39.37■■■■□ 3.89
MRPL41-201ENST00000371443 FHAD1B1AJZ9 1412 aa39.35■■■■□ 3.89
MRPL41-201ENST00000371443 NUP160Q12769 1436 aa39.34■■■■□ 3.89
MRPL41-201ENST00000371443 ERICH3Q5RHP9 1530 aa39.34■■■■□ 3.89
MRPL41-201ENST00000371443 ERCC6L2Q5T890 1561 aa39.29■■■■□ 3.88
MRPL41-201ENST00000371443 SHROOM2Q13796 1616 aa39.2■■■■□ 3.87
MRPL41-201ENST00000371443 PRG4Q92954 1404 aaPredicted RBP38.97■■■■□ 3.83
MRPL41-201ENST00000371443 RUSC2Q8N2Y8 1516 aa38.96■■■■□ 3.83
MRPL41-201ENST00000371443 JPH4Q96JJ6 628 aa38.9■■■■□ 3.82
MRPL41-201ENST00000371443 KIF27Q86VH2 1401 aa38.83■■■■□ 3.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms