RNA–Protein interactions for RNA: ENST00000475172.5

PNCK-227, Transcript of pregnancy up-regulated nonubiquitous CaM kinase, humanhuman

TSL 5

Gene PNCK, Length 877 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNCK-227ENST00000475172 NISCHQ9Y2I1 1504 aa59.63■■■■■ 7.14
PNCK-227ENST00000475172 CCDC180Q9P1Z9 1646 aa52.93■■■■■ 6.06
PNCK-227ENST00000475172 ABCC9O60706 1549 aa52.1■■■■■ 5.93
PNCK-227ENST00000475172 DCAF8L2P0C7V8 631 aa50.15■■■■■ 5.62
PNCK-227ENST00000475172 RB1CC1Q8TDY2 1594 aa49.97■■■■■ 5.59
PNCK-227ENST00000475172 NACADO15069 1562 aa49.89■■■■■ 5.58
PNCK-227ENST00000475172 ZCCHC6Q5VYS8 1495 aaKnown RBP49.61■■■■■ 5.53
PNCK-227ENST00000475172 MYO15BQ96JP2 1530 aa49.51■■■■■ 5.52
PNCK-227ENST00000475172 DCAF1Q9Y4B6 1507 aa49.27■■■■■ 5.48
PNCK-227ENST00000475172 PABPN1Q86U42 306 aaKnown RBP eCLIP48.78■■■■■ 5.42e-6■■■■□ 23
PNCK-227ENST00000475172 UNC13AQ9UPW8 1703 aa48.72■■■■■ 5.39
PNCK-227ENST00000475172 BICRAQ9NZM4 1560 aa48.43■■■■■ 5.34
PNCK-227ENST00000475172 SCRIBQ14160 1630 aa48.41■■■■■ 5.34
PNCK-227ENST00000475172 DNAJC5BQ9UF47 199 aa47.98■■■■■ 5.27
PNCK-227ENST00000475172 SHROOM4Q9ULL8 1493 aa47.88■■■■■ 5.26
PNCK-227ENST00000475172 EIF4G1Q04637 1599 aaKnown RBP47.2■■■■■ 5.15
PNCK-227ENST00000475172 CC2D2AQ9P2K1 1620 aa47.04■■■■■ 5.12
PNCK-227ENST00000475172 CECR2Q9BXF3 1484 aa46.81■■■■■ 5.08
PNCK-227ENST00000475172 SMARCA4P51532 1647 aa46.25■■■■■ 4.99
PNCK-227ENST00000475172 BAZ1AQ9NRL2 1556 aaPredicted RBP46.21■■■■■ 4.99
PNCK-227ENST00000475172 ATAD2BQ9ULI0 1458 aa46.09■■■■■ 4.97
PNCK-227ENST00000475172 NCAPD3P42695 1498 aa46.08■■■■■ 4.97
PNCK-227ENST00000475172 SMARCA2P51531 1590 aa46■■■■■ 4.95
PNCK-227ENST00000475172 MROH2BQ7Z745 1585 aa45.96■■■■■ 4.95
PNCK-227ENST00000475172 PEG3Q9GZU2 1588 aa45.76■■■■■ 4.92
PNCK-227ENST00000475172 HMGXB3Q12766 1538 aa45.76■■■■■ 4.92
PNCK-227ENST00000475172 BAZ1BQ9UIG0 1483 aaKnown RBP45.71■■■■■ 4.91
PNCK-227ENST00000475172 RSF1Q96T23 1441 aaPredicted RBP45.44■■■■■ 4.87
PNCK-227ENST00000475172 WIZO95785 1651 aa45.44■■■■■ 4.86
PNCK-227ENST00000475172 NESP48681 1621 aa45.03■■■■■ 4.8
PNCK-227ENST00000475172 TOP2AP11388 1531 aaKnown RBP44.94■■■■■ 4.78
PNCK-227ENST00000475172 ERCC6Q03468 1493 aa44.93■■■■■ 4.78
PNCK-227ENST00000475172 LAMC3Q9Y6N6 1575 aa44.82■■■■■ 4.77
PNCK-227ENST00000475172 CADPSQ9ULU8 1353 aa44.78■■■■■ 4.76
PNCK-227ENST00000475172 PDS5BQ9NTI5 1447 aa44.63■■■■■ 4.73
PNCK-227ENST00000475172 CCDC88BA6NC98 1476 aa44.49■■■■■ 4.71
PNCK-227ENST00000475172 CFTRP13569 1480 aa44.44■■■■■ 4.7
PNCK-227ENST00000475172 CUX2O14529 1486 aa44.4■■■■■ 4.7
PNCK-227ENST00000475172 KIF21AQ7Z4S6 1674 aa44.39■■■■■ 4.7
PNCK-227ENST00000475172 SUPT5HO00267 1087 aaKnown RBP44.38■■■■■ 4.7
PNCK-227ENST00000475172 THOC2Q8NI27 1593 aaKnown RBP44.25■■■■■ 4.67
PNCK-227ENST00000475172 FANCD2Q9BXW9 1451 aa44.24■■■■■ 4.67
PNCK-227ENST00000475172 CEP164Q9UPV0 1460 aa44.17■■■■■ 4.66
PNCK-227ENST00000475172 MRC2Q9UBG0 1479 aa44.13■■■■■ 4.65
PNCK-227ENST00000475172 WDR62O43379 1518 aa43.94■■■■■ 4.62
PNCK-227ENST00000475172 PRDM2Q13029 1718 aa43.91■■■■■ 4.62
PNCK-227ENST00000475172 URB2Q14146 1524 aaKnown RBP43.78■■■■■ 4.6
PNCK-227ENST00000475172 ABCC8Q09428 1581 aa43.5■■■■■ 4.55
PNCK-227ENST00000475172 TOPBP1Q92547 1522 aa43.49■■■■■ 4.55
PNCK-227ENST00000475172 DNMBPQ6XZF7 1577 aa43.4■■■■■ 4.54
PNCK-227ENST00000475172 DNAJC5Q9H3Z4 198 aa43.3■■■■■ 4.52
PNCK-227ENST00000475172 IFT140Q96RY7 1462 aa43.26■■■■■ 4.52
PNCK-227ENST00000475172 POLA1P09884 1462 aaPredicted RBP43.12■■■■■ 4.49
PNCK-227ENST00000475172 CUX1P39880 1505 aa43.12■■■■■ 4.49
PNCK-227ENST00000475172 ZNF608Q9ULD9 1512 aaPredicted RBP43.09■■■■■ 4.49
PNCK-227ENST00000475172 SOGA1O94964 1423 aa43.02■■■■■ 4.48
PNCK-227ENST00000475172 FGD5Q6ZNL6 1462 aa43.01■■■■■ 4.48
PNCK-227ENST00000475172 RAD54L2Q9Y4B4 1467 aa42.99■■■■■ 4.47
PNCK-227ENST00000475172 TARBP1Q13395 1621 aaKnown RBP42.97■■■■■ 4.47
PNCK-227ENST00000475172 AQRO60306 1485 aaKnown RBP eCLIP42.88■■■■■ 4.466e-8■■■■■ 29.2
PNCK-227ENST00000475172 WRNQ14191 1432 aaPredicted RBP eCLIP42.86■■■■■ 4.45
PNCK-227ENST00000475172 EIF4G3O43432 1585 aaKnown RBP42.82■■■■■ 4.45
PNCK-227ENST00000475172 TDRD9Q8NDG6 1382 aaKnown RBP42.82■■■■■ 4.45
PNCK-227ENST00000475172 OSCARQ8IYS5 282 aa42.72■■■■■ 4.43
PNCK-227ENST00000475172 TOP2BQ02880 1626 aa42.68■■■■■ 4.42
PNCK-227ENST00000475172 SYNJ1O43426 1573 aa42.68■■■■■ 4.42
PNCK-227ENST00000475172 BIVM-ERCC5R4GMW8 1640 aa42.64■■■■■ 4.42
PNCK-227ENST00000475172 WDR97A6NE52 1622 aa42.58■■■■■ 4.41
PNCK-227ENST00000475172 ABCA10Q8WWZ4 1543 aa42.56■■■■■ 4.4
PNCK-227ENST00000475172 FBLN2P98095 1184 aa42.52■■■■■ 4.4
PNCK-227ENST00000475172 GRIN2BQ13224 1484 aa42.48■■■■■ 4.39
PNCK-227ENST00000475172 GAPVD1Q14C86 1478 aa42.48■■■■■ 4.39
PNCK-227ENST00000475172 SNAPC4Q5SXM2 1469 aa42.43■■■■■ 4.38
PNCK-227ENST00000475172 MAGI1Q96QZ7 1491 aaPredicted RBP42.35■■■■■ 4.37
PNCK-227ENST00000475172 CHMP7Q8WUX9 453 aaPredicted RBP42.34■■■■■ 4.37
PNCK-227ENST00000475172 ABCA5Q8WWZ7 1642 aa42.34■■■■■ 4.37
PNCK-227ENST00000475172 CHD1O14646 1710 aa42.29■■■■■ 4.36
PNCK-227ENST00000475172 PBRM1Q86U86 1689 aa42.26■■■■■ 4.36
PNCK-227ENST00000475172 SYNJ2O15056 1496 aa42.2■■■■■ 4.35
PNCK-227ENST00000475172 ERICH3Q5RHP9 1530 aa42.04■■■■■ 4.32
PNCK-227ENST00000475172 KIF27Q86VH2 1401 aa41.99■■■■■ 4.31
PNCK-227ENST00000475172 FHAD1B1AJZ9 1412 aa41.98■■■■■ 4.31
PNCK-227ENST00000475172 ADAMTS12P58397 1594 aa41.95■■■■■ 4.31
PNCK-227ENST00000475172 TRIM41Q8WV44 630 aa41.92■■■■■ 4.3
PNCK-227ENST00000475172 GRIN2AQ12879 1464 aa41.91■■■■■ 4.3
PNCK-227ENST00000475172 ARHGEF11O15085 1522 aa41.87■■■■■ 4.29
PNCK-227ENST00000475172 RIMBP3CA6NJZ7 1639 aa41.86■■■■■ 4.29
PNCK-227ENST00000475172 RIMBP3BA6NNM3 1639 aa41.86■■■■■ 4.29
PNCK-227ENST00000475172 RIMBP3Q9UFD9 1639 aa41.86■■■■■ 4.29
PNCK-227ENST00000475172 IGF1RP08069 1367 aa41.86■■■■■ 4.29
PNCK-227ENST00000475172 CLASP1Q7Z460 1538 aa41.85■■■■■ 4.29
PNCK-227ENST00000475172 NUP160Q12769 1436 aa41.71■■■■■ 4.27
PNCK-227ENST00000475172 CEP170Q5SW79 1584 aa41.67■■■■■ 4.26
PNCK-227ENST00000475172 CYB5RLQ6IPT4 315 aa41.67■■■■■ 4.26
PNCK-227ENST00000475172 CARMIL1Q5VZK9 1371 aa41.61■■■■■ 4.25
PNCK-227ENST00000475172 CUL7Q14999 1698 aa41.6■■■■■ 4.25
PNCK-227ENST00000475172 RUSC2Q8N2Y8 1516 aa41.57■■■■■ 4.25
PNCK-227ENST00000475172 ARAP1Q96P48 1450 aa41.53■■■■■ 4.24
PNCK-227ENST00000475172 JPH4Q96JJ6 628 aa41.44■■■■■ 4.22
PNCK-227ENST00000475172 SHROOM2Q13796 1616 aa41.33■■■■■ 4.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms