RNA–Protein interactions for RNA: ENST00000489536.5

PNCK-232, Transcript of pregnancy up-regulated nonubiquitous CaM kinase, humanhuman

TSL 2

Gene PNCK, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNCK-232ENST00000489536 NISCHQ9Y2I1 1504 aa35.71■■■■□ 3.31
PNCK-232ENST00000489536 ABCC9O60706 1549 aa32■■■□□ 2.71
PNCK-232ENST00000489536 CCDC180Q9P1Z9 1646 aa31.77■■■□□ 2.68
PNCK-232ENST00000489536 DCAF8L2P0C7V8 631 aa30.51■■■□□ 2.47
PNCK-232ENST00000489536 RB1CC1Q8TDY2 1594 aa30.37■■■□□ 2.45
PNCK-232ENST00000489536 NACADO15069 1562 aa30.2■■■□□ 2.42
PNCK-232ENST00000489536 DNAJC5BQ9UF47 199 aa30.03■■■□□ 2.4
PNCK-232ENST00000489536 PABPN1Q86U42 306 aaKnown RBP eCLIP29.98■■■□□ 2.393e-6■■■■□ 22.6
PNCK-232ENST00000489536 MYO15BQ96JP2 1530 aa29.78■■■□□ 2.36
PNCK-232ENST00000489536 ZCCHC6Q5VYS8 1495 aaKnown RBP29.56■■■□□ 2.32
PNCK-232ENST00000489536 DCAF1Q9Y4B6 1507 aa29.43■■■□□ 2.3
PNCK-232ENST00000489536 BICRAQ9NZM4 1560 aa29.41■■■□□ 2.3
PNCK-232ENST00000489536 UNC13AQ9UPW8 1703 aa29.4■■■□□ 2.3
PNCK-232ENST00000489536 SCRIBQ14160 1630 aa29.12■■■□□ 2.25
PNCK-232ENST00000489536 SHROOM4Q9ULL8 1493 aa29.04■■■□□ 2.24
PNCK-232ENST00000489536 CECR2Q9BXF3 1484 aa28.8■■■□□ 2.2
PNCK-232ENST00000489536 CC2D2AQ9P2K1 1620 aa28.76■■■□□ 2.2
PNCK-232ENST00000489536 EIF4G1Q04637 1599 aaKnown RBP28.74■■■□□ 2.19
PNCK-232ENST00000489536 NCAPD3P42695 1498 aa27.95■■■□□ 2.07
PNCK-232ENST00000489536 DNAJC5Q9H3Z4 198 aa27.9■■■□□ 2.06
PNCK-232ENST00000489536 ATAD2BQ9ULI0 1458 aa27.88■■■□□ 2.05
PNCK-232ENST00000489536 SMARCA2P51531 1590 aa27.75■■■□□ 2.03
PNCK-232ENST00000489536 SMARCA4P51532 1647 aa27.74■■■□□ 2.03
PNCK-232ENST00000489536 BAZ1AQ9NRL2 1556 aaPredicted RBP27.69■■■□□ 2.02
PNCK-232ENST00000489536 ERCC6Q03468 1493 aa27.65■■■□□ 2.02
PNCK-232ENST00000489536 BAZ1BQ9UIG0 1483 aaKnown RBP27.63■■■□□ 2.01
PNCK-232ENST00000489536 HMGXB3Q12766 1538 aa27.62■■■□□ 2.01
PNCK-232ENST00000489536 MROH2BQ7Z745 1585 aa27.52■■■□□ 2
PNCK-232ENST00000489536 NESP48681 1621 aa27.47■■□□□ 1.99
PNCK-232ENST00000489536 CUX2O14529 1486 aa27.46■■□□□ 1.99
PNCK-232ENST00000489536 PEG3Q9GZU2 1588 aa27.44■■□□□ 1.98
PNCK-232ENST00000489536 PDS5BQ9NTI5 1447 aa27.23■■□□□ 1.95
PNCK-232ENST00000489536 LAMC3Q9Y6N6 1575 aa27.2■■□□□ 1.94
PNCK-232ENST00000489536 CADPSQ9ULU8 1353 aa27.19■■□□□ 1.94
PNCK-232ENST00000489536 WIZO95785 1651 aa27.11■■□□□ 1.93
PNCK-232ENST00000489536 RSF1Q96T23 1441 aaPredicted RBP27.07■■□□□ 1.92
PNCK-232ENST00000489536 THOC2Q8NI27 1593 aaKnown RBP26.97■■□□□ 1.91
PNCK-232ENST00000489536 KIF21AQ7Z4S6 1674 aa26.89■■□□□ 1.9
PNCK-232ENST00000489536 MRC2Q9UBG0 1479 aa26.88■■□□□ 1.89
PNCK-232ENST00000489536 CFTRP13569 1480 aa26.81■■□□□ 1.88
PNCK-232ENST00000489536 FANCD2Q9BXW9 1451 aa26.81■■□□□ 1.88
PNCK-232ENST00000489536 CEP164Q9UPV0 1460 aa26.81■■□□□ 1.88
PNCK-232ENST00000489536 TOP2AP11388 1531 aaKnown RBP26.81■■□□□ 1.88
PNCK-232ENST00000489536 WDR62O43379 1518 aa26.73■■□□□ 1.87
PNCK-232ENST00000489536 CCDC88BA6NC98 1476 aa26.62■■□□□ 1.85
PNCK-232ENST00000489536 URB2Q14146 1524 aaKnown RBP26.54■■□□□ 1.84
PNCK-232ENST00000489536 OSCARQ8IYS5 282 aa26.47■■□□□ 1.83
PNCK-232ENST00000489536 TRIM41Q8WV44 630 aa26.45■■□□□ 1.82
PNCK-232ENST00000489536 IFT140Q96RY7 1462 aa26.3■■□□□ 1.8
PNCK-232ENST00000489536 TOPBP1Q92547 1522 aa26.27■■□□□ 1.8
PNCK-232ENST00000489536 ABCC8Q09428 1581 aa26.27■■□□□ 1.8
PNCK-232ENST00000489536 ZNF608Q9ULD9 1512 aaPredicted RBP26.23■■□□□ 1.79
PNCK-232ENST00000489536 SUPT5HO00267 1087 aaKnown RBP26.2■■□□□ 1.78
PNCK-232ENST00000489536 PRDM2Q13029 1718 aa26.17■■□□□ 1.78
PNCK-232ENST00000489536 DNMBPQ6XZF7 1577 aa26.12■■□□□ 1.77
PNCK-232ENST00000489536 FBLN2P98095 1184 aa26.08■■□□□ 1.77
PNCK-232ENST00000489536 AQRO60306 1485 aaKnown RBP eCLIP26.08■■□□□ 1.774e-8■■■■■ 27.4
PNCK-232ENST00000489536 SOGA1O94964 1423 aa26.03■■□□□ 1.76
PNCK-232ENST00000489536 POLA1P09884 1462 aaPredicted RBP26.02■■□□□ 1.76
PNCK-232ENST00000489536 RAD54L2Q9Y4B4 1467 aa25.99■■□□□ 1.75
PNCK-232ENST00000489536 TDRD9Q8NDG6 1382 aaKnown RBP25.99■■□□□ 1.75
PNCK-232ENST00000489536 EIF4G3O43432 1585 aaKnown RBP25.94■■□□□ 1.74
PNCK-232ENST00000489536 TARBP1Q13395 1621 aaKnown RBP25.92■■□□□ 1.74
PNCK-232ENST00000489536 FGD5Q6ZNL6 1462 aa25.88■■□□□ 1.73
PNCK-232ENST00000489536 CYB5RLQ6IPT4 315 aa25.87■■□□□ 1.73
PNCK-232ENST00000489536 CHMP7Q8WUX9 453 aaPredicted RBP25.87■■□□□ 1.73
PNCK-232ENST00000489536 CUX1P39880 1505 aa25.83■■□□□ 1.73
PNCK-232ENST00000489536 ARHGEF11O15085 1522 aa25.79■■□□□ 1.72
PNCK-232ENST00000489536 RIMBP3CA6NJZ7 1639 aa25.79■■□□□ 1.72
PNCK-232ENST00000489536 RIMBP3BA6NNM3 1639 aa25.79■■□□□ 1.72
PNCK-232ENST00000489536 RIMBP3Q9UFD9 1639 aa25.79■■□□□ 1.72
PNCK-232ENST00000489536 SNAPC4Q5SXM2 1469 aa25.74■■□□□ 1.71
PNCK-232ENST00000489536 GRIN2BQ13224 1484 aa25.72■■□□□ 1.71
PNCK-232ENST00000489536 MAGI1Q96QZ7 1491 aaPredicted RBP25.66■■□□□ 1.7
PNCK-232ENST00000489536 CHD1O14646 1710 aa25.65■■□□□ 1.7
PNCK-232ENST00000489536 GAPVD1Q14C86 1478 aa25.65■■□□□ 1.7
PNCK-232ENST00000489536 WDR97A6NE52 1622 aa25.64■■□□□ 1.7
PNCK-232ENST00000489536 WRNQ14191 1432 aaPredicted RBP eCLIP25.61■■□□□ 1.69
PNCK-232ENST00000489536 TRHP20396 242 aaPredicted RBP25.6■■□□□ 1.69
PNCK-232ENST00000489536 SYNJ2O15056 1496 aa25.6■■□□□ 1.69
PNCK-232ENST00000489536 ABCA10Q8WWZ4 1543 aa25.58■■□□□ 1.68
PNCK-232ENST00000489536 ARAP1Q96P48 1450 aa25.55■■□□□ 1.68
PNCK-232ENST00000489536 SYNJ1O43426 1573 aa25.52■■□□□ 1.68
PNCK-232ENST00000489536 CLASP1Q7Z460 1538 aa25.46■■□□□ 1.67
PNCK-232ENST00000489536 TOP2BQ02880 1626 aa25.39■■□□□ 1.66
PNCK-232ENST00000489536 ABCA5Q8WWZ7 1642 aa25.39■■□□□ 1.66
PNCK-232ENST00000489536 PBRM1Q86U86 1689 aa25.36■■□□□ 1.65
PNCK-232ENST00000489536 FHAD1B1AJZ9 1412 aa25.35■■□□□ 1.65
PNCK-232ENST00000489536 GRIN2AQ12879 1464 aa25.34■■□□□ 1.65
PNCK-232ENST00000489536 BIVM-ERCC5R4GMW8 1640 aa25.31■■□□□ 1.64
PNCK-232ENST00000489536 NUP160Q12769 1436 aa25.25■■□□□ 1.63
PNCK-232ENST00000489536 ERICH3Q5RHP9 1530 aa25.23■■□□□ 1.63
PNCK-232ENST00000489536 ADAMTS12P58397 1594 aa25.22■■□□□ 1.63
PNCK-232ENST00000489536 JPH4Q96JJ6 628 aa25.21■■□□□ 1.63
PNCK-232ENST00000489536 CEP170Q5SW79 1584 aa25.17■■□□□ 1.62
PNCK-232ENST00000489536 ERCC6L2Q5T890 1561 aa25.12■■□□□ 1.61
PNCK-232ENST00000489536 PRG4Q92954 1404 aaPredicted RBP25.11■■□□□ 1.61
PNCK-232ENST00000489536 IGF1RP08069 1367 aa25.1■■□□□ 1.61
PNCK-232ENST00000489536 KIF27Q86VH2 1401 aa25.1■■□□□ 1.61
PNCK-232ENST00000489536 NPM1P06748 294 aaKnown RBP eCLIP25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms