RNA–Protein interactions for RNA: ENST00000525770.5

FOXRED1-204, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 2

Gene FOXRED1, Length 1,427 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-204ENST00000525770 NISCHQ9Y2I1 1504 aa36.39■■■■□ 3.42
FOXRED1-204ENST00000525770 CCDC180Q9P1Z9 1646 aa32.55■■■□□ 2.8
FOXRED1-204ENST00000525770 ABCC9O60706 1549 aa32.14■■■□□ 2.74
FOXRED1-204ENST00000525770 RB1CC1Q8TDY2 1594 aa30.77■■■□□ 2.52
FOXRED1-204ENST00000525770 NACADO15069 1562 aa30.66■■■□□ 2.5
FOXRED1-204ENST00000525770 DCAF8L2P0C7V8 631 aa30.4■■■□□ 2.46
FOXRED1-204ENST00000525770 MYO15BQ96JP2 1530 aa30.4■■■□□ 2.46
FOXRED1-204ENST00000525770 ZCCHC6Q5VYS8 1495 aaKnown RBP30.23■■■□□ 2.43
FOXRED1-204ENST00000525770 UNC13AQ9UPW8 1703 aa30.2■■■□□ 2.42
FOXRED1-204ENST00000525770 DCAF1Q9Y4B6 1507 aa30.12■■■□□ 2.41
FOXRED1-204ENST00000525770 PABPN1Q86U42 306 aaKnown RBP eCLIP29.95■■■□□ 2.38
FOXRED1-204ENST00000525770 BICRAQ9NZM4 1560 aa29.94■■■□□ 2.38
FOXRED1-204ENST00000525770 DNAJC5BQ9UF47 199 aa29.93■■■□□ 2.38
FOXRED1-204ENST00000525770 SCRIBQ14160 1630 aa29.6■■■□□ 2.33
FOXRED1-204ENST00000525770 SHROOM4Q9ULL8 1493 aa29.53■■■□□ 2.32
FOXRED1-204ENST00000525770 EIF4G1Q04637 1599 aaKnown RBP29.12■■■□□ 2.25
FOXRED1-204ENST00000525770 CC2D2AQ9P2K1 1620 aa29.11■■■□□ 2.25
FOXRED1-204ENST00000525770 CECR2Q9BXF3 1484 aa28.93■■■□□ 2.22
FOXRED1-204ENST00000525770 SMARCA4P51532 1647 aa28.32■■■□□ 2.12
FOXRED1-204ENST00000525770 NCAPD3P42695 1498 aa28.31■■■□□ 2.12
FOXRED1-204ENST00000525770 ATAD2BQ9ULI0 1458 aa28.25■■■□□ 2.11
FOXRED1-204ENST00000525770 BAZ1AQ9NRL2 1556 aaPredicted RBP28.2■■■□□ 2.1
FOXRED1-204ENST00000525770 SMARCA2P51531 1590 aa28.18■■■□□ 2.1
FOXRED1-204ENST00000525770 HMGXB3Q12766 1538 aa28.13■■■□□ 2.09
FOXRED1-204ENST00000525770 PEG3Q9GZU2 1588 aa28.09■■■□□ 2.09
FOXRED1-204ENST00000525770 MROH2BQ7Z745 1585 aa28.04■■■□□ 2.08
FOXRED1-204ENST00000525770 BAZ1BQ9UIG0 1483 aaKnown RBP27.95■■■□□ 2.07
FOXRED1-204ENST00000525770 NESP48681 1621 aa27.74■■■□□ 2.03
FOXRED1-204ENST00000525770 WIZO95785 1651 aa27.73■■■□□ 2.03
FOXRED1-204ENST00000525770 ERCC6Q03468 1493 aa27.67■■■□□ 2.02
FOXRED1-204ENST00000525770 LAMC3Q9Y6N6 1575 aa27.61■■■□□ 2.01
FOXRED1-204ENST00000525770 CUX2O14529 1486 aa27.6■■■□□ 2.01
FOXRED1-204ENST00000525770 RSF1Q96T23 1441 aaPredicted RBP27.57■■■□□ 2
FOXRED1-204ENST00000525770 KIF21AQ7Z4S6 1674 aa27.43■■□□□ 1.98
FOXRED1-204ENST00000525770 THOC2Q8NI27 1593 aaKnown RBP27.43■■□□□ 1.98
FOXRED1-204ENST00000525770 CADPSQ9ULU8 1353 aa27.43■■□□□ 1.98
FOXRED1-204ENST00000525770 TOP2AP11388 1531 aaKnown RBP27.38■■□□□ 1.97
FOXRED1-204ENST00000525770 PDS5BQ9NTI5 1447 aa27.38■■□□□ 1.97
FOXRED1-204ENST00000525770 DNAJC5Q9H3Z4 198 aa27.23■■□□□ 1.95
FOXRED1-204ENST00000525770 CFTRP13569 1480 aa27.22■■□□□ 1.95
FOXRED1-204ENST00000525770 MRC2Q9UBG0 1479 aa27.15■■□□□ 1.94
FOXRED1-204ENST00000525770 WDR62O43379 1518 aa27.11■■□□□ 1.93
FOXRED1-204ENST00000525770 FANCD2Q9BXW9 1451 aa27.1■■□□□ 1.93
FOXRED1-204ENST00000525770 CEP164Q9UPV0 1460 aa27.09■■□□□ 1.93
FOXRED1-204ENST00000525770 CCDC88BA6NC98 1476 aa27.06■■□□□ 1.92
FOXRED1-204ENST00000525770 PRDM2Q13029 1718 aa27.04■■□□□ 1.92
FOXRED1-204ENST00000525770 URB2Q14146 1524 aaKnown RBP26.89■■□□□ 1.9
FOXRED1-204ENST00000525770 TOPBP1Q92547 1522 aa26.65■■□□□ 1.86
FOXRED1-204ENST00000525770 ABCC8Q09428 1581 aa26.6■■□□□ 1.85
FOXRED1-204ENST00000525770 DNMBPQ6XZF7 1577 aa26.59■■□□□ 1.85
FOXRED1-204ENST00000525770 IFT140Q96RY7 1462 aa26.55■■□□□ 1.84
FOXRED1-204ENST00000525770 ZNF608Q9ULD9 1512 aaPredicted RBP26.5■■□□□ 1.83
FOXRED1-204ENST00000525770 SUPT5HO00267 1087 aaKnown RBP26.45■■□□□ 1.82
FOXRED1-204ENST00000525770 TARBP1Q13395 1621 aaKnown RBP26.45■■□□□ 1.82
FOXRED1-204ENST00000525770 POLA1P09884 1462 aaPredicted RBP26.4■■□□□ 1.82
FOXRED1-204ENST00000525770 EIF4G3O43432 1585 aaKnown RBP26.37■■□□□ 1.81
FOXRED1-204ENST00000525770 OSCARQ8IYS5 282 aa26.36■■□□□ 1.81
FOXRED1-204ENST00000525770 CUX1P39880 1505 aa26.32■■□□□ 1.8
FOXRED1-204ENST00000525770 AQRO60306 1485 aaKnown RBP eCLIP26.28■■□□□ 1.82e-10■■■■■ 41.8
FOXRED1-204ENST00000525770 RAD54L2Q9Y4B4 1467 aa26.27■■□□□ 1.8
FOXRED1-204ENST00000525770 FGD5Q6ZNL6 1462 aa26.26■■□□□ 1.79
FOXRED1-204ENST00000525770 SOGA1O94964 1423 aa26.25■■□□□ 1.79
FOXRED1-204ENST00000525770 WDR97A6NE52 1622 aa26.17■■□□□ 1.78
FOXRED1-204ENST00000525770 TDRD9Q8NDG6 1382 aaKnown RBP26.15■■□□□ 1.78
FOXRED1-204ENST00000525770 CHD1O14646 1710 aa26.15■■□□□ 1.78
FOXRED1-204ENST00000525770 TRIM41Q8WV44 630 aa26.05■■□□□ 1.76
FOXRED1-204ENST00000525770 RIMBP3CA6NJZ7 1639 aa26.03■■□□□ 1.76
FOXRED1-204ENST00000525770 RIMBP3BA6NNM3 1639 aa26.03■■□□□ 1.76
FOXRED1-204ENST00000525770 RIMBP3Q9UFD9 1639 aa26.03■■□□□ 1.76
FOXRED1-204ENST00000525770 BIVM-ERCC5R4GMW8 1640 aa26.02■■□□□ 1.76
FOXRED1-204ENST00000525770 SNAPC4Q5SXM2 1469 aa26.01■■□□□ 1.75
FOXRED1-204ENST00000525770 ABCA10Q8WWZ4 1543 aa26.01■■□□□ 1.75
FOXRED1-204ENST00000525770 TOP2BQ02880 1626 aa26■■□□□ 1.75
FOXRED1-204ENST00000525770 GRIN2BQ13224 1484 aa25.99■■□□□ 1.75
FOXRED1-204ENST00000525770 MAGI1Q96QZ7 1491 aaPredicted RBP25.98■■□□□ 1.75
FOXRED1-204ENST00000525770 PBRM1Q86U86 1689 aa25.97■■□□□ 1.75
FOXRED1-204ENST00000525770 ABCA5Q8WWZ7 1642 aa25.97■■□□□ 1.75
FOXRED1-204ENST00000525770 SYNJ1O43426 1573 aa25.97■■□□□ 1.75
FOXRED1-204ENST00000525770 ARHGEF11O15085 1522 aa25.97■■□□□ 1.75
FOXRED1-204ENST00000525770 WRNQ14191 1432 aaPredicted RBP eCLIP25.95■■□□□ 1.75
FOXRED1-204ENST00000525770 GAPVD1Q14C86 1478 aa25.95■■□□□ 1.74
FOXRED1-204ENST00000525770 FBLN2P98095 1184 aa25.94■■□□□ 1.74
FOXRED1-204ENST00000525770 SYNJ2O15056 1496 aa25.89■■□□□ 1.73
FOXRED1-204ENST00000525770 CLASP1Q7Z460 1538 aa25.85■■□□□ 1.73
FOXRED1-204ENST00000525770 CHMP7Q8WUX9 453 aaPredicted RBP25.84■■□□□ 1.73
FOXRED1-204ENST00000525770 ARAP1Q96P48 1450 aa25.74■■□□□ 1.71
FOXRED1-204ENST00000525770 ADAMTS12P58397 1594 aa25.71■■□□□ 1.71
FOXRED1-204ENST00000525770 ERICH3Q5RHP9 1530 aa25.69■■□□□ 1.7
FOXRED1-204ENST00000525770 CYB5RLQ6IPT4 315 aa25.69■■□□□ 1.7
FOXRED1-204ENST00000525770 GRIN2AQ12879 1464 aa25.67■■□□□ 1.7
FOXRED1-204ENST00000525770 FHAD1B1AJZ9 1412 aa25.63■■□□□ 1.69
FOXRED1-204ENST00000525770 NUP160Q12769 1436 aa25.6■■□□□ 1.69
FOXRED1-204ENST00000525770 CEP170Q5SW79 1584 aa25.59■■□□□ 1.69
FOXRED1-204ENST00000525770 SHROOM2Q13796 1616 aa25.5■■□□□ 1.67
FOXRED1-204ENST00000525770 ERCC6L2Q5T890 1561 aa25.47■■□□□ 1.67
FOXRED1-204ENST00000525770 IGF1RP08069 1367 aa25.43■■□□□ 1.66
FOXRED1-204ENST00000525770 KIF27Q86VH2 1401 aa25.43■■□□□ 1.66
FOXRED1-204ENST00000525770 CUL7Q14999 1698 aa25.38■■□□□ 1.65
FOXRED1-204ENST00000525770 RUSC2Q8N2Y8 1516 aa25.35■■□□□ 1.65
FOXRED1-204ENST00000525770 JPH4Q96JJ6 628 aa25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms