RNA–Protein interactions for RNA: ENST00000462280.1

PNCK-218, Transcript of pregnancy up-regulated nonubiquitous CaM kinase, humanhuman

TSL 3

Gene PNCK, Length 704 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNCK-218ENST00000462280 NISCHQ9Y2I1 1504 aa50.65■■■■■ 5.7
PNCK-218ENST00000462280 ABCC9O60706 1549 aa45.57■■■■■ 4.89
PNCK-218ENST00000462280 CCDC180Q9P1Z9 1646 aa45.44■■■■■ 4.87
PNCK-218ENST00000462280 RB1CC1Q8TDY2 1594 aa43.35■■■■■ 4.53
PNCK-218ENST00000462280 NACADO15069 1562 aa43.05■■■■■ 4.48
PNCK-218ENST00000462280 DNAJC5BQ9UF47 199 aa42.88■■■■■ 4.45
PNCK-218ENST00000462280 DCAF8L2P0C7V8 631 aa42.76■■■■■ 4.44
PNCK-218ENST00000462280 MYO15BQ96JP2 1530 aa42.48■■■■■ 4.39
PNCK-218ENST00000462280 PABPN1Q86U42 306 aaKnown RBP eCLIP42.43■■■■■ 4.38
PNCK-218ENST00000462280 UNC13AQ9UPW8 1703 aa42.23■■■■■ 4.35
PNCK-218ENST00000462280 BICRAQ9NZM4 1560 aa42.06■■■■■ 4.32
PNCK-218ENST00000462280 ZCCHC6Q5VYS8 1495 aaKnown RBP41.96■■■■■ 4.31
PNCK-218ENST00000462280 DCAF1Q9Y4B6 1507 aa41.87■■■■■ 4.29
PNCK-218ENST00000462280 SHROOM4Q9ULL8 1493 aa41.59■■■■■ 4.25
PNCK-218ENST00000462280 SCRIBQ14160 1630 aa41.37■■■■■ 4.21
PNCK-218ENST00000462280 CC2D2AQ9P2K1 1620 aa41.15■■■■■ 4.18
PNCK-218ENST00000462280 CECR2Q9BXF3 1484 aa41.09■■■■■ 4.17
PNCK-218ENST00000462280 EIF4G1Q04637 1599 aaKnown RBP41.06■■■■■ 4.16
PNCK-218ENST00000462280 NCAPD3P42695 1498 aa39.78■■■■□ 3.96
PNCK-218ENST00000462280 ATAD2BQ9ULI0 1458 aa39.62■■■■□ 3.93
PNCK-218ENST00000462280 DNAJC5Q9H3Z4 198 aa39.5■■■■□ 3.91
PNCK-218ENST00000462280 SMARCA4P51532 1647 aa39.49■■■■□ 3.91
PNCK-218ENST00000462280 SMARCA2P51531 1590 aa39.48■■■■□ 3.91
PNCK-218ENST00000462280 HMGXB3Q12766 1538 aa39.44■■■■□ 3.9
PNCK-218ENST00000462280 CUX2O14529 1486 aa39.38■■■■□ 3.9
PNCK-218ENST00000462280 ERCC6Q03468 1493 aa39.37■■■■□ 3.89
PNCK-218ENST00000462280 BAZ1AQ9NRL2 1556 aaPredicted RBP39.33■■■■□ 3.89
PNCK-218ENST00000462280 BAZ1BQ9UIG0 1483 aaKnown RBP39.2■■■■□ 3.87
PNCK-218ENST00000462280 PEG3Q9GZU2 1588 aa39.16■■■■□ 3.86
PNCK-218ENST00000462280 NESP48681 1621 aa39.11■■■■□ 3.85
PNCK-218ENST00000462280 MROH2BQ7Z745 1585 aa38.99■■■■□ 3.83
PNCK-218ENST00000462280 LAMC3Q9Y6N6 1575 aa38.85■■■■□ 3.81
PNCK-218ENST00000462280 THOC2Q8NI27 1593 aaKnown RBP38.73■■■■□ 3.79
PNCK-218ENST00000462280 PDS5BQ9NTI5 1447 aa38.68■■■■□ 3.78
PNCK-218ENST00000462280 CADPSQ9ULU8 1353 aa38.57■■■■□ 3.76
PNCK-218ENST00000462280 KIF21AQ7Z4S6 1674 aa38.52■■■■□ 3.76
PNCK-218ENST00000462280 WIZO95785 1651 aa38.47■■■■□ 3.75
PNCK-218ENST00000462280 MRC2Q9UBG0 1479 aa38.32■■■■□ 3.72
PNCK-218ENST00000462280 WDR62O43379 1518 aa38.22■■■■□ 3.71
PNCK-218ENST00000462280 RSF1Q96T23 1441 aaPredicted RBP38.19■■■■□ 3.7
PNCK-218ENST00000462280 CEP164Q9UPV0 1460 aa38.14■■■■□ 3.7
PNCK-218ENST00000462280 CFTRP13569 1480 aa38.09■■■■□ 3.69
PNCK-218ENST00000462280 FANCD2Q9BXW9 1451 aa38.09■■■■□ 3.69
PNCK-218ENST00000462280 TOP2AP11388 1531 aaKnown RBP38.04■■■■□ 3.68
PNCK-218ENST00000462280 URB2Q14146 1524 aaKnown RBP37.77■■■■□ 3.64
PNCK-218ENST00000462280 TRIM41Q8WV44 630 aa37.65■■■■□ 3.62
PNCK-218ENST00000462280 CCDC88BA6NC98 1476 aa37.62■■■■□ 3.61
PNCK-218ENST00000462280 OSCARQ8IYS5 282 aa37.57■■■■□ 3.6
PNCK-218ENST00000462280 PRDM2Q13029 1718 aa37.55■■■■□ 3.6
PNCK-218ENST00000462280 IFT140Q96RY7 1462 aa37.4■■■■□ 3.58
PNCK-218ENST00000462280 TOPBP1Q92547 1522 aa37.35■■■■□ 3.57
PNCK-218ENST00000462280 ZNF608Q9ULD9 1512 aaPredicted RBP37.31■■■■□ 3.56
PNCK-218ENST00000462280 ABCC8Q09428 1581 aa37.3■■■■□ 3.56
PNCK-218ENST00000462280 DNMBPQ6XZF7 1577 aa37.19■■■■□ 3.54
PNCK-218ENST00000462280 EIF4G3O43432 1585 aaKnown RBP37.07■■■■□ 3.52
PNCK-218ENST00000462280 RIMBP3CA6NJZ7 1639 aa37■■■■□ 3.51
PNCK-218ENST00000462280 RIMBP3BA6NNM3 1639 aa37■■■■□ 3.51
PNCK-218ENST00000462280 RIMBP3Q9UFD9 1639 aa37■■■■□ 3.51
PNCK-218ENST00000462280 TARBP1Q13395 1621 aaKnown RBP36.99■■■■□ 3.51
PNCK-218ENST00000462280 AQRO60306 1485 aaKnown RBP eCLIP36.97■■■■□ 3.516e-11■■■■■ 40.7
PNCK-218ENST00000462280 POLA1P09884 1462 aaPredicted RBP36.96■■■■□ 3.51
PNCK-218ENST00000462280 ARHGEF11O15085 1522 aa36.92■■■■□ 3.5
PNCK-218ENST00000462280 SOGA1O94964 1423 aa36.81■■■■□ 3.48
PNCK-218ENST00000462280 RAD54L2Q9Y4B4 1467 aa36.81■■■■□ 3.48
PNCK-218ENST00000462280 CHD1O14646 1710 aa36.75■■■■□ 3.47
PNCK-218ENST00000462280 FBLN2P98095 1184 aa36.74■■■■□ 3.47
PNCK-218ENST00000462280 TDRD9Q8NDG6 1382 aaKnown RBP36.73■■■■□ 3.47
PNCK-218ENST00000462280 FGD5Q6ZNL6 1462 aa36.7■■■■□ 3.47
PNCK-218ENST00000462280 CYB5RLQ6IPT4 315 aa36.67■■■■□ 3.46
PNCK-218ENST00000462280 WDR97A6NE52 1622 aa36.67■■■■□ 3.46
PNCK-218ENST00000462280 CUX1P39880 1505 aa36.64■■■■□ 3.46
PNCK-218ENST00000462280 SNAPC4Q5SXM2 1469 aa36.59■■■■□ 3.45
PNCK-218ENST00000462280 ARAP1Q96P48 1450 aa36.56■■■■□ 3.44
PNCK-218ENST00000462280 MAGI1Q96QZ7 1491 aaPredicted RBP36.52■■■■□ 3.44
PNCK-218ENST00000462280 GRIN2BQ13224 1484 aa36.5■■■■□ 3.43
PNCK-218ENST00000462280 CHMP7Q8WUX9 453 aaPredicted RBP36.49■■■■□ 3.43
PNCK-218ENST00000462280 CLASP1Q7Z460 1538 aa36.43■■■■□ 3.42
PNCK-218ENST00000462280 SYNJ1O43426 1573 aa36.4■■■■□ 3.42
PNCK-218ENST00000462280 SYNJ2O15056 1496 aa36.39■■■■□ 3.42
PNCK-218ENST00000462280 SUPT5HO00267 1087 aaKnown RBP36.36■■■■□ 3.41
PNCK-218ENST00000462280 GAPVD1Q14C86 1478 aa36.35■■■■□ 3.41
PNCK-218ENST00000462280 ABCA10Q8WWZ4 1543 aa36.31■■■■□ 3.4
PNCK-218ENST00000462280 TRHP20396 242 aaPredicted RBP36.28■■■■□ 3.4
PNCK-218ENST00000462280 PBRM1Q86U86 1689 aa36.23■■■■□ 3.39
PNCK-218ENST00000462280 ABCA5Q8WWZ7 1642 aa36.22■■■■□ 3.39
PNCK-218ENST00000462280 WRNQ14191 1432 aaPredicted RBP eCLIP36.16■■■■□ 3.38
PNCK-218ENST00000462280 GRIN2AQ12879 1464 aa36.03■■■■□ 3.36
PNCK-218ENST00000462280 TOP2BQ02880 1626 aa36.02■■■■□ 3.36
PNCK-218ENST00000462280 BIVM-ERCC5R4GMW8 1640 aa36.01■■■■□ 3.35
PNCK-218ENST00000462280 ADAMTS12P58397 1594 aa35.96■■■■□ 3.35
PNCK-218ENST00000462280 NUP160Q12769 1436 aa35.93■■■■□ 3.34
PNCK-218ENST00000462280 FHAD1B1AJZ9 1412 aa35.91■■■■□ 3.34
PNCK-218ENST00000462280 CEP170Q5SW79 1584 aa35.86■■■■□ 3.33
PNCK-218ENST00000462280 ERICH3Q5RHP9 1530 aa35.85■■■■□ 3.33
PNCK-218ENST00000462280 ERCC6L2Q5T890 1561 aa35.81■■■■□ 3.32
PNCK-218ENST00000462280 SHROOM2Q13796 1616 aa35.73■■■■□ 3.31
PNCK-218ENST00000462280 PRG4Q92954 1404 aaPredicted RBP35.57■■■■□ 3.29
PNCK-218ENST00000462280 JPH4Q96JJ6 628 aa35.57■■■■□ 3.28
PNCK-218ENST00000462280 RUSC2Q8N2Y8 1516 aa35.45■■■■□ 3.27
PNCK-218ENST00000462280 IGF1RP08069 1367 aa35.38■■■■□ 3.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms