RNA–Protein interactions for RNA: ENST00000527004.5

FOXRED1-207, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 5

Gene FOXRED1, Length 1,760 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-207ENST00000527004 NISCHQ9Y2I1 1504 aa34.95■■■■□ 3.18
FOXRED1-207ENST00000527004 CCDC180Q9P1Z9 1646 aa30.24■■■□□ 2.43
FOXRED1-207ENST00000527004 ZCCHC6Q5VYS8 1495 aaKnown RBP29.44■■■□□ 2.3
FOXRED1-207ENST00000527004 DCAF1Q9Y4B6 1507 aa28.93■■■□□ 2.22
FOXRED1-207ENST00000527004 SHROOM4Q9ULL8 1493 aa28.73■■■□□ 2.19
FOXRED1-207ENST00000527004 DCAF8L2P0C7V8 631 aa28.73■■■□□ 2.19
FOXRED1-207ENST00000527004 MYO15BQ96JP2 1530 aa28.46■■■□□ 2.15
FOXRED1-207ENST00000527004 ABCC9O60706 1549 aa28.23■■■□□ 2.11
FOXRED1-207ENST00000527004 NACADO15069 1562 aa28.12■■■□□ 2.09
FOXRED1-207ENST00000527004 SUPT5HO00267 1087 aaKnown RBP27.89■■■□□ 2.06
FOXRED1-207ENST00000527004 SCRIBQ14160 1630 aa27.83■■■□□ 2.05
FOXRED1-207ENST00000527004 RB1CC1Q8TDY2 1594 aa27.75■■■□□ 2.03
FOXRED1-207ENST00000527004 RSF1Q96T23 1441 aaPredicted RBP27.28■■□□□ 1.96
FOXRED1-207ENST00000527004 CECR2Q9BXF3 1484 aa27.1■■□□□ 1.93
FOXRED1-207ENST00000527004 UNC13AQ9UPW8 1703 aa27.09■■□□□ 1.93
FOXRED1-207ENST00000527004 MROH2BQ7Z745 1585 aa26.99■■□□□ 1.91
FOXRED1-207ENST00000527004 BAZ1AQ9NRL2 1556 aaPredicted RBP26.95■■□□□ 1.91
FOXRED1-207ENST00000527004 CHIC1Q5VXU3 224 aa26.95■■□□□ 1.9
FOXRED1-207ENST00000527004 BICRAQ9NZM4 1560 aa26.89■■□□□ 1.9
FOXRED1-207ENST00000527004 WIZO95785 1651 aa26.75■■□□□ 1.87
FOXRED1-207ENST00000527004 SMARCA4P51532 1647 aa26.74■■□□□ 1.87
FOXRED1-207ENST00000527004 PABPN1Q86U42 306 aaKnown RBP eCLIP26.74■■□□□ 1.87
FOXRED1-207ENST00000527004 TOP2AP11388 1531 aaKnown RBP26.53■■□□□ 1.84
FOXRED1-207ENST00000527004 PEG3Q9GZU2 1588 aa26.45■■□□□ 1.82
FOXRED1-207ENST00000527004 SMARCA2P51531 1590 aa26.28■■□□□ 1.8
FOXRED1-207ENST00000527004 CCDC88BA6NC98 1476 aa26.28■■□□□ 1.8
FOXRED1-207ENST00000527004 ATAD2BQ9ULI0 1458 aa26.25■■□□□ 1.79
FOXRED1-207ENST00000527004 TRIM41Q8WV44 630 aa26.24■■□□□ 1.79
FOXRED1-207ENST00000527004 EIF4G1Q04637 1599 aaKnown RBP26.21■■□□□ 1.79
FOXRED1-207ENST00000527004 BAZ1BQ9UIG0 1483 aaKnown RBP26.11■■□□□ 1.77
FOXRED1-207ENST00000527004 NCAPD3P42695 1498 aa25.99■■□□□ 1.75
FOXRED1-207ENST00000527004 HMGXB3Q12766 1538 aa25.94■■□□□ 1.74
FOXRED1-207ENST00000527004 LOC105371045A0A1W2PR82 267 aa25.9■■□□□ 1.74
FOXRED1-207ENST00000527004 DNAJC5BQ9UF47 199 aa25.81■■□□□ 1.72
FOXRED1-207ENST00000527004 ABCC8Q09428 1581 aa25.8■■□□□ 1.72
FOXRED1-207ENST00000527004 FAM9AQ8IZU1 332 aaPredicted RBP25.71■■□□□ 1.71
FOXRED1-207ENST00000527004 WRNQ14191 1432 aaPredicted RBP eCLIP25.67■■□□□ 1.7
FOXRED1-207ENST00000527004 EEA1Q15075 1411 aa25.56■■□□□ 1.68
FOXRED1-207ENST00000527004 CC2D2AQ9P2K1 1620 aa25.55■■□□□ 1.68
FOXRED1-207ENST00000527004 CFTRP13569 1480 aa25.51■■□□□ 1.67
FOXRED1-207ENST00000527004 SYNJ1O43426 1573 aa25.48■■□□□ 1.67
FOXRED1-207ENST00000527004 SOGA1O94964 1423 aa25.46■■□□□ 1.67
FOXRED1-207ENST00000527004 TOP2BQ02880 1626 aa25.38■■□□□ 1.65
FOXRED1-207ENST00000527004 CSRNP3Q8WYN3 585 aa25.37■■□□□ 1.65
FOXRED1-207ENST00000527004 CADPSQ9ULU8 1353 aa25.34■■□□□ 1.65
FOXRED1-207ENST00000527004 BIVM-ERCC5R4GMW8 1640 aa25.32■■□□□ 1.64
FOXRED1-207ENST00000527004 RUSC2Q8N2Y8 1516 aa25.31■■□□□ 1.64
FOXRED1-207ENST00000527004 EHMT2Q96KQ7 1210 aa25.28■■□□□ 1.64
FOXRED1-207ENST00000527004 PRDM2Q13029 1718 aa25.26■■□□□ 1.63
FOXRED1-207ENST00000527004 TNIKQ9UKE5 1360 aa25.21■■□□□ 1.63
FOXRED1-207ENST00000527004 CUX1P39880 1505 aa25.21■■□□□ 1.63
FOXRED1-207ENST00000527004 GOLGA3Q08378 1498 aa25.17■■□□□ 1.62
FOXRED1-207ENST00000527004 PCGF6Q9BYE7 350 aa25.16■■□□□ 1.62
FOXRED1-207ENST00000527004 CEP164Q9UPV0 1460 aa25.14■■□□□ 1.62
FOXRED1-207ENST00000527004 KIF21BO75037 1637 aa25.13■■□□□ 1.61
FOXRED1-207ENST00000527004 TRIM26Q12899 539 aaPredicted RBP25.11■■□□□ 1.61
FOXRED1-207ENST00000527004 CEP162Q5TB80 1403 aa25.05■■□□□ 1.6
FOXRED1-207ENST00000527004 UBTFP17480 764 aaKnown RBP25.05■■□□□ 1.6
FOXRED1-207ENST00000527004 FANCD2Q9BXW9 1451 aa25.03■■□□□ 1.6
FOXRED1-207ENST00000527004 KIF27Q86VH2 1401 aa25■■□□□ 1.59
FOXRED1-207ENST00000527004 LAMC3Q9Y6N6 1575 aa24.99■■□□□ 1.59
FOXRED1-207ENST00000527004 PRXQ9BXM0 1461 aa24.93■■□□□ 1.58
FOXRED1-207ENST00000527004 ERICH3Q5RHP9 1530 aa24.92■■□□□ 1.58
FOXRED1-207ENST00000527004 RAPGEF2Q9Y4G8 1499 aa24.91■■□□□ 1.58
FOXRED1-207ENST00000527004 NESP48681 1621 aa24.91■■□□□ 1.58
FOXRED1-207ENST00000527004 FGD5Q6ZNL6 1462 aa24.87■■□□□ 1.57
FOXRED1-207ENST00000527004 DNMBPQ6XZF7 1577 aa24.86■■□□□ 1.57
FOXRED1-207ENST00000527004 PDS5BQ9NTI5 1447 aa24.82■■□□□ 1.56
FOXRED1-207ENST00000527004 CUX2O14529 1486 aa24.8■■□□□ 1.56
FOXRED1-207ENST00000527004 TOPBP1Q92547 1522 aa24.8■■□□□ 1.56
FOXRED1-207ENST00000527004 HRCP23327 699 aa24.79■■□□□ 1.56
FOXRED1-207ENST00000527004 CLIP1P30622 1438 aa24.78■■□□□ 1.56
FOXRED1-207ENST00000527004 IGF1RP08069 1367 aa24.74■■□□□ 1.55
FOXRED1-207ENST00000527004 POLA1P09884 1462 aaPredicted RBP24.71■■□□□ 1.55
FOXRED1-207ENST00000527004 ABCA10Q8WWZ4 1543 aa24.7■■□□□ 1.54
FOXRED1-207ENST00000527004 URB2Q14146 1524 aaKnown RBP24.67■■□□□ 1.54
FOXRED1-207ENST00000527004 VPS8Q8N3P4 1428 aa24.63■■□□□ 1.53
FOXRED1-207ENST00000527004 CARMIL1Q5VZK9 1371 aa24.62■■□□□ 1.53
FOXRED1-207ENST00000527004 RAD54L2Q9Y4B4 1467 aa24.61■■□□□ 1.53
FOXRED1-207ENST00000527004 PPARGC1BQ86YN6 1023 aaKnown RBP24.6■■□□□ 1.53
FOXRED1-207ENST00000527004 KIF21AQ7Z4S6 1674 aa24.55■■□□□ 1.52
FOXRED1-207ENST00000527004 WDR97A6NE52 1622 aa24.49■■□□□ 1.51
FOXRED1-207ENST00000527004 ARAP1Q96P48 1450 aa24.46■■□□□ 1.51
FOXRED1-207ENST00000527004 RANGAP1P46060 587 aaPredicted RBP24.45■■□□□ 1.5
FOXRED1-207ENST00000527004 CUL7Q14999 1698 aa24.45■■□□□ 1.5
FOXRED1-207ENST00000527004 MRC2Q9UBG0 1479 aa24.45■■□□□ 1.5
FOXRED1-207ENST00000527004 APLP2Q06481 763 aa24.44■■□□□ 1.5
FOXRED1-207ENST00000527004 ABCA5Q8WWZ7 1642 aa24.41■■□□□ 1.5
FOXRED1-207ENST00000527004 ARHGAP35Q9NRY4 1499 aa24.4■■□□□ 1.5
FOXRED1-207ENST00000527004 GAPVD1Q14C86 1478 aa24.38■■□□□ 1.49
FOXRED1-207ENST00000527004 TARBP1Q13395 1621 aaKnown RBP24.37■■□□□ 1.49
FOXRED1-207ENST00000527004 TDRD9Q8NDG6 1382 aaKnown RBP24.36■■□□□ 1.49
FOXRED1-207ENST00000527004 ZEB1P37275 1124 aaPredicted RBP24.36■■□□□ 1.49
FOXRED1-207ENST00000527004 TTBK1Q5TCY1 1321 aaPredicted RBP24.3■■□□□ 1.48
FOXRED1-207ENST00000527004 WDR62O43379 1518 aa24.3■■□□□ 1.48
FOXRED1-207ENST00000527004 IFT140Q96RY7 1462 aa24.23■■□□□ 1.47
FOXRED1-207ENST00000527004 EFCAB5A4FU69 1503 aa24.2■■□□□ 1.46
FOXRED1-207ENST00000527004 ERCC6Q03468 1493 aa24.18■■□□□ 1.46
FOXRED1-207ENST00000527004 FHAD1B1AJZ9 1412 aa24.18■■□□□ 1.46
FOXRED1-207ENST00000527004 CTTNBP2Q8WZ74 1663 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms