RNA–Protein interactions for RNA: ENST00000533839.5

FOXRED1-216, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 4

Gene FOXRED1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-216ENST00000533839 NISCHQ9Y2I1 1504 aa23.22■■□□□ 1.31
FOXRED1-216ENST00000533839 CCDC180Q9P1Z9 1646 aa20.63■□□□□ 0.89
FOXRED1-216ENST00000533839 ABCC9O60706 1549 aa20.49■□□□□ 0.87
FOXRED1-216ENST00000533839 DCAF8L2P0C7V8 631 aa19.78■□□□□ 0.76
FOXRED1-216ENST00000533839 RB1CC1Q8TDY2 1594 aa19.63■□□□□ 0.73
FOXRED1-216ENST00000533839 NACADO15069 1562 aa19.57■□□□□ 0.72
FOXRED1-216ENST00000533839 MYO15BQ96JP2 1530 aa19.39■□□□□ 0.69
FOXRED1-216ENST00000533839 DNAJC5BQ9UF47 199 aa19.26■□□□□ 0.67
FOXRED1-216ENST00000533839 ZCCHC6Q5VYS8 1495 aaKnown RBP19.23■□□□□ 0.67
FOXRED1-216ENST00000533839 PABPN1Q86U42 306 aaKnown RBP eCLIP19.22■□□□□ 0.67
FOXRED1-216ENST00000533839 DCAF1Q9Y4B6 1507 aa19.2■□□□□ 0.66
FOXRED1-216ENST00000533839 UNC13AQ9UPW8 1703 aa18.93■□□□□ 0.62
FOXRED1-216ENST00000533839 BICRAQ9NZM4 1560 aa18.9■□□□□ 0.62
FOXRED1-216ENST00000533839 SHROOM4Q9ULL8 1493 aa18.83■□□□□ 0.6
FOXRED1-216ENST00000533839 SCRIBQ14160 1630 aa18.82■□□□□ 0.6
FOXRED1-216ENST00000533839 EIF4G1Q04637 1599 aaKnown RBP18.49■□□□□ 0.55
FOXRED1-216ENST00000533839 CECR2Q9BXF3 1484 aa18.46■□□□□ 0.55
FOXRED1-216ENST00000533839 CC2D2AQ9P2K1 1620 aa18.45■□□□□ 0.54
FOXRED1-216ENST00000533839 NCAPD3P42695 1498 aa18.09■□□□□ 0.49
FOXRED1-216ENST00000533839 ATAD2BQ9ULI0 1458 aa18.03■□□□□ 0.48
FOXRED1-216ENST00000533839 BAZ1AQ9NRL2 1556 aaPredicted RBP18.03■□□□□ 0.48
FOXRED1-216ENST00000533839 SMARCA2P51531 1590 aa18.02■□□□□ 0.48
FOXRED1-216ENST00000533839 SMARCA4P51532 1647 aa17.98■□□□□ 0.47
FOXRED1-216ENST00000533839 BAZ1BQ9UIG0 1483 aaKnown RBP17.89■□□□□ 0.45
FOXRED1-216ENST00000533839 HMGXB3Q12766 1538 aa17.89■□□□□ 0.45
FOXRED1-216ENST00000533839 MROH2BQ7Z745 1585 aa17.85■□□□□ 0.45
FOXRED1-216ENST00000533839 PEG3Q9GZU2 1588 aa17.82■□□□□ 0.44
FOXRED1-216ENST00000533839 ERCC6Q03468 1493 aa17.76■□□□□ 0.43
FOXRED1-216ENST00000533839 DNAJC5Q9H3Z4 198 aa17.76■□□□□ 0.43
FOXRED1-216ENST00000533839 RSF1Q96T23 1441 aaPredicted RBP17.64■□□□□ 0.42
FOXRED1-216ENST00000533839 PDS5BQ9NTI5 1447 aa17.62■□□□□ 0.41
FOXRED1-216ENST00000533839 NESP48681 1621 aa17.61■□□□□ 0.41
FOXRED1-216ENST00000533839 CADPSQ9ULU8 1353 aa17.61■□□□□ 0.41
FOXRED1-216ENST00000533839 CUX2O14529 1486 aa17.6■□□□□ 0.41
FOXRED1-216ENST00000533839 WIZO95785 1651 aa17.6■□□□□ 0.41
FOXRED1-216ENST00000533839 LAMC3Q9Y6N6 1575 aa17.59■□□□□ 0.41
FOXRED1-216ENST00000533839 TOP2AP11388 1531 aaKnown RBP17.45■□□□□ 0.38
FOXRED1-216ENST00000533839 CFTRP13569 1480 aa17.38■□□□□ 0.37
FOXRED1-216ENST00000533839 MRC2Q9UBG0 1479 aa17.34■□□□□ 0.37
FOXRED1-216ENST00000533839 FANCD2Q9BXW9 1451 aa17.33■□□□□ 0.37
FOXRED1-216ENST00000533839 CEP164Q9UPV0 1460 aa17.33■□□□□ 0.37
FOXRED1-216ENST00000533839 CCDC88BA6NC98 1476 aa17.31■□□□□ 0.36
FOXRED1-216ENST00000533839 KIF21AQ7Z4S6 1674 aa17.29■□□□□ 0.36
FOXRED1-216ENST00000533839 THOC2Q8NI27 1593 aaKnown RBP17.29■□□□□ 0.36
FOXRED1-216ENST00000533839 SUPT5HO00267 1087 aaKnown RBP17.23■□□□□ 0.35
FOXRED1-216ENST00000533839 WDR62O43379 1518 aa17.21■□□□□ 0.34
FOXRED1-216ENST00000533839 ABCC8Q09428 1581 aa17.12■□□□□ 0.33
FOXRED1-216ENST00000533839 URB2Q14146 1524 aaKnown RBP17.1■□□□□ 0.33
FOXRED1-216ENST00000533839 OSCARQ8IYS5 282 aa17.03■□□□□ 0.32
FOXRED1-216ENST00000533839 PRDM2Q13029 1718 aa17.03■□□□□ 0.32
FOXRED1-216ENST00000533839 IFT140Q96RY7 1462 aa17.01■□□□□ 0.31
FOXRED1-216ENST00000533839 TOPBP1Q92547 1522 aa17■□□□□ 0.31
FOXRED1-216ENST00000533839 DNMBPQ6XZF7 1577 aa16.94■□□□□ 0.3
FOXRED1-216ENST00000533839 TRIM41Q8WV44 630 aa16.93■□□□□ 0.3
FOXRED1-216ENST00000533839 SOGA1O94964 1423 aa16.89■□□□□ 0.29
FOXRED1-216ENST00000533839 ZNF608Q9ULD9 1512 aaPredicted RBP16.85■□□□□ 0.29
FOXRED1-216ENST00000533839 POLA1P09884 1462 aaPredicted RBP16.83■□□□□ 0.28
FOXRED1-216ENST00000533839 FBLN2P98095 1184 aa16.83■□□□□ 0.28
FOXRED1-216ENST00000533839 AQRO60306 1485 aaKnown RBP eCLIP16.81■□□□□ 0.282e-10■■■■■ 41.8
FOXRED1-216ENST00000533839 TDRD9Q8NDG6 1382 aaKnown RBP16.79■□□□□ 0.28
FOXRED1-216ENST00000533839 RAD54L2Q9Y4B4 1467 aa16.78■□□□□ 0.28
FOXRED1-216ENST00000533839 FGD5Q6ZNL6 1462 aa16.77■□□□□ 0.28
FOXRED1-216ENST00000533839 CHMP7Q8WUX9 453 aaPredicted RBP16.76■□□□□ 0.27
FOXRED1-216ENST00000533839 CUX1P39880 1505 aa16.75■□□□□ 0.27
FOXRED1-216ENST00000533839 TARBP1Q13395 1621 aaKnown RBP16.74■□□□□ 0.27
FOXRED1-216ENST00000533839 WRNQ14191 1432 aaPredicted RBP eCLIP16.7■□□□□ 0.26
FOXRED1-216ENST00000533839 EIF4G3O43432 1585 aaKnown RBP16.7■□□□□ 0.26
FOXRED1-216ENST00000533839 WDR97A6NE52 1622 aa16.67■□□□□ 0.26
FOXRED1-216ENST00000533839 GRIN2BQ13224 1484 aa16.67■□□□□ 0.26
FOXRED1-216ENST00000533839 GAPVD1Q14C86 1478 aa16.64■□□□□ 0.25
FOXRED1-216ENST00000533839 MAGI1Q96QZ7 1491 aaPredicted RBP16.62■□□□□ 0.25
FOXRED1-216ENST00000533839 ABCA10Q8WWZ4 1543 aa16.62■□□□□ 0.25
FOXRED1-216ENST00000533839 SNAPC4Q5SXM2 1469 aa16.6■□□□□ 0.25
FOXRED1-216ENST00000533839 CYB5RLQ6IPT4 315 aa16.57■□□□□ 0.24
FOXRED1-216ENST00000533839 TOP2BQ02880 1626 aa16.56■□□□□ 0.24
FOXRED1-216ENST00000533839 SYNJ2O15056 1496 aa16.55■□□□□ 0.24
FOXRED1-216ENST00000533839 BIVM-ERCC5R4GMW8 1640 aa16.5■□□□□ 0.23
FOXRED1-216ENST00000533839 SYNJ1O43426 1573 aa16.5■□□□□ 0.23
FOXRED1-216ENST00000533839 CHD1O14646 1710 aa16.5■□□□□ 0.23
FOXRED1-216ENST00000533839 ARHGEF11O15085 1522 aa16.5■□□□□ 0.23
FOXRED1-216ENST00000533839 RIMBP3CA6NJZ7 1639 aa16.47■□□□□ 0.23
FOXRED1-216ENST00000533839 RIMBP3BA6NNM3 1639 aa16.47■□□□□ 0.23
FOXRED1-216ENST00000533839 RIMBP3Q9UFD9 1639 aa16.47■□□□□ 0.23
FOXRED1-216ENST00000533839 FHAD1B1AJZ9 1412 aa16.46■□□□□ 0.23
FOXRED1-216ENST00000533839 ABCA5Q8WWZ7 1642 aa16.45■□□□□ 0.22
FOXRED1-216ENST00000533839 ERICH3Q5RHP9 1530 aa16.42■□□□□ 0.22
FOXRED1-216ENST00000533839 PBRM1Q86U86 1689 aa16.41■□□□□ 0.22
FOXRED1-216ENST00000533839 KIF27Q86VH2 1401 aa16.41■□□□□ 0.22
FOXRED1-216ENST00000533839 GRIN2AQ12879 1464 aa16.4■□□□□ 0.22
FOXRED1-216ENST00000533839 TRHP20396 242 aaPredicted RBP16.37■□□□□ 0.21
FOXRED1-216ENST00000533839 CLASP1Q7Z460 1538 aa16.36■□□□□ 0.21
FOXRED1-216ENST00000533839 JPH4Q96JJ6 628 aa16.35■□□□□ 0.21
FOXRED1-216ENST00000533839 IGF1RP08069 1367 aa16.35■□□□□ 0.21
FOXRED1-216ENST00000533839 NUP160Q12769 1436 aa16.33■□□□□ 0.2
FOXRED1-216ENST00000533839 ARAP1Q96P48 1450 aa16.33■□□□□ 0.2
FOXRED1-216ENST00000533839 ADAMTS12P58397 1594 aa16.31■□□□□ 0.2
FOXRED1-216ENST00000533839 CARMIL1Q5VZK9 1371 aa16.28■□□□□ 0.2
FOXRED1-216ENST00000533839 CEP170Q5SW79 1584 aa16.23■□□□□ 0.19
FOXRED1-216ENST00000533839 PRG4Q92954 1404 aaPredicted RBP16.23■□□□□ 0.19
FOXRED1-216ENST00000533839 NPM1P06748 294 aaKnown RBP eCLIP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms