RNA–Protein interactions for RNA: ENST00000534011.5

FOXRED1-217, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 2

Gene FOXRED1, Length 1,955 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-217ENST00000534011 NISCHQ9Y2I1 1504 aa28.16■■■□□ 2.1
FOXRED1-217ENST00000534011 CCDC180Q9P1Z9 1646 aa23.91■■□□□ 1.42
FOXRED1-217ENST00000534011 SHROOM4Q9ULL8 1493 aa23.91■■□□□ 1.42
FOXRED1-217ENST00000534011 ZCCHC6Q5VYS8 1495 aaKnown RBP23.9■■□□□ 1.42
FOXRED1-217ENST00000534011 SUPT5HO00267 1087 aaKnown RBP23.61■■□□□ 1.37
FOXRED1-217ENST00000534011 DCAF1Q9Y4B6 1507 aa23.25■■□□□ 1.31
FOXRED1-217ENST00000534011 CHIC1Q5VXU3 224 aa23.24■■□□□ 1.31
FOXRED1-217ENST00000534011 MYO15BQ96JP2 1530 aa23.2■■□□□ 1.31
FOXRED1-217ENST00000534011 HRCP23327 699 aa23.05■■□□□ 1.28
FOXRED1-217ENST00000534011 DCAF8L2P0C7V8 631 aa22.92■■□□□ 1.26
FOXRED1-217ENST00000534011 PCGF6Q9BYE7 350 aa22.7■■□□□ 1.23
FOXRED1-217ENST00000534011 ABCC9O60706 1549 aa22.6■■□□□ 1.21
FOXRED1-217ENST00000534011 LOC105371045A0A1W2PR82 267 aa22.43■■□□□ 1.18
FOXRED1-217ENST00000534011 PPARGC1BQ86YN6 1023 aaKnown RBP22.41■■□□□ 1.18
FOXRED1-217ENST00000534011 TRIM26Q12899 539 aaPredicted RBP22.37■■□□□ 1.17
FOXRED1-217ENST00000534011 RSF1Q96T23 1441 aaPredicted RBP22.35■■□□□ 1.17
FOXRED1-217ENST00000534011 SCRIBQ14160 1630 aa22.24■■□□□ 1.15
FOXRED1-217ENST00000534011 RB1CC1Q8TDY2 1594 aa22.22■■□□□ 1.15
FOXRED1-217ENST00000534011 ZEB1P37275 1124 aaPredicted RBP22.1■■□□□ 1.13
FOXRED1-217ENST00000534011 TRIM41Q8WV44 630 aa22.08■■□□□ 1.13
FOXRED1-217ENST00000534011 NACADO15069 1562 aa22.01■■□□□ 1.11
FOXRED1-217ENST00000534011 MROH2BQ7Z745 1585 aa21.83■■□□□ 1.09
FOXRED1-217ENST00000534011 CECR2Q9BXF3 1484 aa21.82■■□□□ 1.08
FOXRED1-217ENST00000534011 FAM9AQ8IZU1 332 aaPredicted RBP21.74■■□□□ 1.07
FOXRED1-217ENST00000534011 BAZ1AQ9NRL2 1556 aaPredicted RBP21.72■■□□□ 1.07
FOXRED1-217ENST00000534011 WIZO95785 1651 aa21.71■■□□□ 1.07
FOXRED1-217ENST00000534011 EIF4G1Q04637 1599 aaKnown RBP21.67■■□□□ 1.06
FOXRED1-217ENST00000534011 EHMT2Q96KQ7 1210 aa21.5■■□□□ 1.03
FOXRED1-217ENST00000534011 TOP2AP11388 1531 aaKnown RBP21.49■■□□□ 1.03
FOXRED1-217ENST00000534011 PELP1Q8IZL8 1130 aaKnown RBP21.48■■□□□ 1.03
FOXRED1-217ENST00000534011 WRNQ14191 1432 aaPredicted RBP eCLIP21.44■■□□□ 1.02
FOXRED1-217ENST00000534011 SCAF1Q9H7N4 1312 aaKnown RBP21.39■■□□□ 1.02
FOXRED1-217ENST00000534011 SMARCA4P51532 1647 aa21.38■■□□□ 1.01
FOXRED1-217ENST00000534011 SMARCA2P51531 1590 aa21.34■■□□□ 1.01
FOXRED1-217ENST00000534011 CCDC88BA6NC98 1476 aa21.33■■□□□ 1
FOXRED1-217ENST00000534011 EEA1Q15075 1411 aa21.31■■□□□ 1
FOXRED1-217ENST00000534011 CCER1Q8TC90 406 aaPredicted RBP21.28■■□□□ 1
FOXRED1-217ENST00000534011 ABCC8Q09428 1581 aa21.28■■□□□ 1
FOXRED1-217ENST00000534011 TNIKQ9UKE5 1360 aa21.27■■□□□ 1
FOXRED1-217ENST00000534011 CEP162Q5TB80 1403 aa21.26■□□□□ 0.99
FOXRED1-217ENST00000534011 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.25■□□□□ 0.99
FOXRED1-217ENST00000534011 UNC13AQ9UPW8 1703 aa21.18■□□□□ 0.98
FOXRED1-217ENST00000534011 SOGA1O94964 1423 aa21.15■□□□□ 0.98
FOXRED1-217ENST00000534011 CSRNP3Q8WYN3 585 aa21.11■□□□□ 0.97
FOXRED1-217ENST00000534011 ACIN1Q9UKV3 1341 aaKnown RBP21.11■□□□□ 0.97
FOXRED1-217ENST00000534011 GOLGA3Q08378 1498 aa21.08■□□□□ 0.97
FOXRED1-217ENST00000534011 DIEXFQ68CQ4 756 aaKnown RBP21.06■□□□□ 0.96
FOXRED1-217ENST00000534011 PEG3Q9GZU2 1588 aa21.06■□□□□ 0.96
FOXRED1-217ENST00000534011 NEUROD1Q13562 356 aa21.01■□□□□ 0.95
FOXRED1-217ENST00000534011 RUSC2Q8N2Y8 1516 aa21■□□□□ 0.95
FOXRED1-217ENST00000534011 CENPBP07199 599 aaPredicted RBP20.99■□□□□ 0.95
FOXRED1-217ENST00000534011 KIF21BO75037 1637 aa20.97■□□□□ 0.95
FOXRED1-217ENST00000534011 UBTFP17480 764 aaKnown RBP20.96■□□□□ 0.95
FOXRED1-217ENST00000534011 CEP164Q9UPV0 1460 aa20.95■□□□□ 0.94
FOXRED1-217ENST00000534011 TTBK1Q5TCY1 1321 aaPredicted RBP20.93■□□□□ 0.94
FOXRED1-217ENST00000534011 BICRAQ9NZM4 1560 aa20.91■□□□□ 0.94
FOXRED1-217ENST00000534011 ZNF316A6NFI3 1004 aaPredicted RBP20.87■□□□□ 0.93
FOXRED1-217ENST00000534011 BAZ1BQ9UIG0 1483 aaKnown RBP20.86■□□□□ 0.93
FOXRED1-217ENST00000534011 SYNJ1O43426 1573 aa20.85■□□□□ 0.93
FOXRED1-217ENST00000534011 GTF3C3Q9Y5Q9 886 aa20.83■□□□□ 0.92
FOXRED1-217ENST00000534011 CLIP1P30622 1438 aa20.8■□□□□ 0.92
FOXRED1-217ENST00000534011 VPS8Q8N3P4 1428 aa20.8■□□□□ 0.92
FOXRED1-217ENST00000534011 ATAD2BQ9ULI0 1458 aa20.74■□□□□ 0.91
FOXRED1-217ENST00000534011 PABPN1Q86U42 306 aaKnown RBP eCLIP20.67■□□□□ 0.9
FOXRED1-217ENST00000534011 RAPGEF2Q9Y4G8 1499 aa20.66■□□□□ 0.9
FOXRED1-217ENST00000534011 TOP2BQ02880 1626 aa20.65■□□□□ 0.9
FOXRED1-217ENST00000534011 APLP2Q06481 763 aa20.62■□□□□ 0.89
FOXRED1-217ENST00000534011 HNRNPUL2Q1KMD3 747 aaKnown RBP20.61■□□□□ 0.89
FOXRED1-217ENST00000534011 CLSPNQ9HAW4 1339 aa20.61■□□□□ 0.89
FOXRED1-217ENST00000534011 ERICH3Q5RHP9 1530 aa20.6■□□□□ 0.89
FOXRED1-217ENST00000534011 BIVM-ERCC5R4GMW8 1640 aa20.6■□□□□ 0.89
FOXRED1-217ENST00000534011 MYT1Q01538 1121 aa20.54■□□□□ 0.88
FOXRED1-217ENST00000534011 MIER1Q8N108 512 aa20.52■□□□□ 0.88
FOXRED1-217ENST00000534011 PRXQ9BXM0 1461 aa20.52■□□□□ 0.88
FOXRED1-217ENST00000534011 YTHDC1Q96MU7 727 aaKnown RBP20.5■□□□□ 0.87
FOXRED1-217ENST00000534011 ARAP1Q96P48 1450 aa20.44■□□□□ 0.86
FOXRED1-217ENST00000534011 DHX57Q6P158 1386 aaKnown RBP20.41■□□□□ 0.86
FOXRED1-217ENST00000534011 HMGXB3Q12766 1538 aa20.39■□□□□ 0.85
FOXRED1-217ENST00000534011 RRBP1Q9P2E9 1410 aaKnown RBP20.39■□□□□ 0.85
FOXRED1-217ENST00000534011 CUX2O14529 1486 aa20.37■□□□□ 0.85
FOXRED1-217ENST00000534011 NCAPD3P42695 1498 aa20.34■□□□□ 0.85
FOXRED1-217ENST00000534011 KIF27Q86VH2 1401 aa20.34■□□□□ 0.85
FOXRED1-217ENST00000534011 CUX1P39880 1505 aa20.33■□□□□ 0.84
FOXRED1-217ENST00000534011 RANGAP1P46060 587 aaPredicted RBP20.29■□□□□ 0.84
FOXRED1-217ENST00000534011 KANK4Q5T7N3 995 aaPredicted RBP20.26■□□□□ 0.83
FOXRED1-217ENST00000534011 CFTRP13569 1480 aa20.24■□□□□ 0.83
FOXRED1-217ENST00000534011 CCNB3Q8WWL7 1395 aa20.22■□□□□ 0.83
FOXRED1-217ENST00000534011 ARHGAP35Q9NRY4 1499 aa20.22■□□□□ 0.83
FOXRED1-217ENST00000534011 MAP3K1Q13233 1512 aa20.21■□□□□ 0.83
FOXRED1-217ENST00000534011 PRDM2Q13029 1718 aa20.16■□□□□ 0.82
FOXRED1-217ENST00000534011 TIAM1Q13009 1591 aa20.09■□□□□ 0.81
FOXRED1-217ENST00000534011 IGF1RP08069 1367 aa20.05■□□□□ 0.8
FOXRED1-217ENST00000534011 MAPKBP1O60336 1514 aa20.05■□□□□ 0.8
FOXRED1-217ENST00000534011 RAB3GAP2Q9H2M9 1393 aa20.04■□□□□ 0.8
FOXRED1-217ENST00000534011 SUPT16HQ9Y5B9 1047 aaKnown RBP20.03■□□□□ 0.8
FOXRED1-217ENST00000534011 LRRC9Q6ZRR7 1453 aa20■□□□□ 0.79
FOXRED1-217ENST00000534011 SETD5Q9C0A6 1442 aa20■□□□□ 0.79
FOXRED1-217ENST00000534011 FHAD1B1AJZ9 1412 aa19.98■□□□□ 0.79
FOXRED1-217ENST00000534011 CARMIL1Q5VZK9 1371 aa19.96■□□□□ 0.79
FOXRED1-217ENST00000534011 CFAP43Q8NDM7 1665 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms