RNA–Protein interactions for RNA: ENST00000340888.7

PNCK-201, Transcript of pregnancy up-regulated nonubiquitous CaM kinase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PNCK, Length 1,508 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNCK-201ENST00000340888 NISCHQ9Y2I1 1504 aa46.44■■■■■ 5.03
PNCK-201ENST00000340888 ABCC9O60706 1549 aa41.25■■■■■ 4.19
PNCK-201ENST00000340888 CCDC180Q9P1Z9 1646 aa40.95■■■■■ 4.15
PNCK-201ENST00000340888 RB1CC1Q8TDY2 1594 aa39.09■■■■□ 3.85
PNCK-201ENST00000340888 DNAJC5BQ9UF47 199 aa39.05■■■■□ 3.84
PNCK-201ENST00000340888 NACADO15069 1562 aa38.79■■■■□ 3.8
PNCK-201ENST00000340888 ZCCHC6Q5VYS8 1495 aaKnown RBP38.79■■■■□ 3.8
PNCK-201ENST00000340888 DCAF8L2P0C7V8 631 aa38.68■■■■□ 3.78
PNCK-201ENST00000340888 PABPN1Q86U42 306 aaKnown RBP eCLIP38.39■■■■□ 3.741e-6■■■■□ 19.8
PNCK-201ENST00000340888 DCAF1Q9Y4B6 1507 aa38.39■■■■□ 3.74
PNCK-201ENST00000340888 MYO15BQ96JP2 1530 aa38.29■■■■□ 3.72
PNCK-201ENST00000340888 UNC13AQ9UPW8 1703 aa38.28■■■■□ 3.72
PNCK-201ENST00000340888 BICRAQ9NZM4 1560 aa38.08■■■■□ 3.69
PNCK-201ENST00000340888 SCRIBQ14160 1630 aa37.45■■■■□ 3.59
PNCK-201ENST00000340888 SHROOM4Q9ULL8 1493 aa37.43■■■■□ 3.58
PNCK-201ENST00000340888 CC2D2AQ9P2K1 1620 aa37.25■■■■□ 3.55
PNCK-201ENST00000340888 CECR2Q9BXF3 1484 aa37.18■■■■□ 3.54
PNCK-201ENST00000340888 EIF4G1Q04637 1599 aaKnown RBP37.11■■■■□ 3.53
PNCK-201ENST00000340888 DNAJC5Q9H3Z4 198 aa35.96■■■■□ 3.35
PNCK-201ENST00000340888 BAZ1AQ9NRL2 1556 aaPredicted RBP35.89■■■■□ 3.34
PNCK-201ENST00000340888 NCAPD3P42695 1498 aa35.87■■■■□ 3.33
PNCK-201ENST00000340888 SMARCA4P51532 1647 aa35.86■■■■□ 3.33
PNCK-201ENST00000340888 MROH2BQ7Z745 1585 aa35.84■■■■□ 3.33
PNCK-201ENST00000340888 ATAD2BQ9ULI0 1458 aa35.72■■■■□ 3.31
PNCK-201ENST00000340888 RSF1Q96T23 1441 aaPredicted RBP35.68■■■■□ 3.3
PNCK-201ENST00000340888 CUX2O14529 1486 aa35.61■■■■□ 3.29
PNCK-201ENST00000340888 ERCC6Q03468 1493 aa35.55■■■■□ 3.28
PNCK-201ENST00000340888 SMARCA2P51531 1590 aa35.53■■■■□ 3.28
PNCK-201ENST00000340888 HMGXB3Q12766 1538 aa35.53■■■■□ 3.28
PNCK-201ENST00000340888 PEG3Q9GZU2 1588 aa35.48■■■■□ 3.27
PNCK-201ENST00000340888 WIZO95785 1651 aa35.47■■■■□ 3.27
PNCK-201ENST00000340888 NESP48681 1621 aa35.4■■■■□ 3.26
PNCK-201ENST00000340888 SUPT5HO00267 1087 aaKnown RBP35.35■■■■□ 3.25
PNCK-201ENST00000340888 BAZ1BQ9UIG0 1483 aaKnown RBP35.3■■■■□ 3.24
PNCK-201ENST00000340888 THOC2Q8NI27 1593 aaKnown RBP35.07■■■■□ 3.2
PNCK-201ENST00000340888 TOP2AP11388 1531 aaKnown RBP35.06■■■■□ 3.2
PNCK-201ENST00000340888 LAMC3Q9Y6N6 1575 aa35.03■■■■□ 3.2
PNCK-201ENST00000340888 KIF21AQ7Z4S6 1674 aa34.88■■■■□ 3.17
PNCK-201ENST00000340888 PDS5BQ9NTI5 1447 aa34.84■■■■□ 3.17
PNCK-201ENST00000340888 CCDC88BA6NC98 1476 aa34.75■■■■□ 3.15
PNCK-201ENST00000340888 CADPSQ9ULU8 1353 aa34.75■■■■□ 3.15
PNCK-201ENST00000340888 MRC2Q9UBG0 1479 aa34.57■■■■□ 3.12
PNCK-201ENST00000340888 WDR62O43379 1518 aa34.51■■■■□ 3.12
PNCK-201ENST00000340888 CFTRP13569 1480 aa34.36■■■■□ 3.09
PNCK-201ENST00000340888 CEP164Q9UPV0 1460 aa34.36■■■■□ 3.09
PNCK-201ENST00000340888 FANCD2Q9BXW9 1451 aa34.34■■■■□ 3.09
PNCK-201ENST00000340888 TRIM41Q8WV44 630 aa34.21■■■■□ 3.07
PNCK-201ENST00000340888 URB2Q14146 1524 aaKnown RBP34.11■■■■□ 3.05
PNCK-201ENST00000340888 PRDM2Q13029 1718 aa34.01■■■■□ 3.03
PNCK-201ENST00000340888 OSCARQ8IYS5 282 aa33.96■■■■□ 3.03
PNCK-201ENST00000340888 ZNF608Q9ULD9 1512 aaPredicted RBP33.74■■■□□ 2.99
PNCK-201ENST00000340888 IFT140Q96RY7 1462 aa33.69■■■□□ 2.98
PNCK-201ENST00000340888 TOPBP1Q92547 1522 aa33.68■■■□□ 2.98
PNCK-201ENST00000340888 ABCC8Q09428 1581 aa33.66■■■□□ 2.98
PNCK-201ENST00000340888 WRNQ14191 1432 aaPredicted RBP eCLIP33.58■■■□□ 2.97
PNCK-201ENST00000340888 CUX1P39880 1505 aa33.57■■■□□ 2.96
PNCK-201ENST00000340888 RIMBP3CA6NJZ7 1639 aa33.56■■■□□ 2.96
PNCK-201ENST00000340888 RIMBP3BA6NNM3 1639 aa33.56■■■□□ 2.96
PNCK-201ENST00000340888 RIMBP3Q9UFD9 1639 aa33.56■■■□□ 2.96
PNCK-201ENST00000340888 DNMBPQ6XZF7 1577 aa33.52■■■□□ 2.96
PNCK-201ENST00000340888 EIF4G3O43432 1585 aaKnown RBP33.48■■■□□ 2.95
PNCK-201ENST00000340888 SYNJ1O43426 1573 aa33.46■■■□□ 2.95
PNCK-201ENST00000340888 ARHGEF11O15085 1522 aa33.43■■■□□ 2.94
PNCK-201ENST00000340888 TARBP1Q13395 1621 aaKnown RBP33.41■■■□□ 2.94
PNCK-201ENST00000340888 TOP2BQ02880 1626 aa33.4■■■□□ 2.94
PNCK-201ENST00000340888 AQRO60306 1485 aaKnown RBP eCLIP33.39■■■□□ 2.944e-8■■■■■ 27.4
PNCK-201ENST00000340888 CHIC1Q5VXU3 224 aa33.38■■■□□ 2.93
PNCK-201ENST00000340888 BIVM-ERCC5R4GMW8 1640 aa33.36■■■□□ 2.93
PNCK-201ENST00000340888 FGD5Q6ZNL6 1462 aa33.33■■■□□ 2.93
PNCK-201ENST00000340888 POLA1P09884 1462 aaPredicted RBP33.32■■■□□ 2.93
PNCK-201ENST00000340888 CHD1O14646 1710 aa33.28■■■□□ 2.92
PNCK-201ENST00000340888 RAD54L2Q9Y4B4 1467 aa33.23■■■□□ 2.91
PNCK-201ENST00000340888 SOGA1O94964 1423 aa33.23■■■□□ 2.91
PNCK-201ENST00000340888 CYB5RLQ6IPT4 315 aa33.2■■■□□ 2.91
PNCK-201ENST00000340888 TDRD9Q8NDG6 1382 aaKnown RBP33.14■■■□□ 2.9
PNCK-201ENST00000340888 FBLN2P98095 1184 aa33.14■■■□□ 2.9
PNCK-201ENST00000340888 ARAP1Q96P48 1450 aa33.12■■■□□ 2.89
PNCK-201ENST00000340888 ABCA10Q8WWZ4 1543 aa33.02■■■□□ 2.88
PNCK-201ENST00000340888 SNAPC4Q5SXM2 1469 aa33.01■■■□□ 2.87
PNCK-201ENST00000340888 WDR97A6NE52 1622 aa32.96■■■□□ 2.87
PNCK-201ENST00000340888 CLASP1Q7Z460 1538 aa32.93■■■□□ 2.86
PNCK-201ENST00000340888 MAGI1Q96QZ7 1491 aaPredicted RBP32.89■■■□□ 2.86
PNCK-201ENST00000340888 GRIN2BQ13224 1484 aa32.87■■■□□ 2.85
PNCK-201ENST00000340888 CHMP7Q8WUX9 453 aaPredicted RBP32.87■■■□□ 2.85
PNCK-201ENST00000340888 TRHP20396 242 aaPredicted RBP32.85■■■□□ 2.85
PNCK-201ENST00000340888 RUSC2Q8N2Y8 1516 aa32.84■■■□□ 2.85
PNCK-201ENST00000340888 GAPVD1Q14C86 1478 aa32.83■■■□□ 2.85
PNCK-201ENST00000340888 KIF27Q86VH2 1401 aa32.81■■■□□ 2.84
PNCK-201ENST00000340888 ABCA5Q8WWZ7 1642 aa32.8■■■□□ 2.84
PNCK-201ENST00000340888 SYNJ2O15056 1496 aa32.8■■■□□ 2.84
PNCK-201ENST00000340888 PBRM1Q86U86 1689 aa32.71■■■□□ 2.83
PNCK-201ENST00000340888 IGF1RP08069 1367 aa32.69■■■□□ 2.82
PNCK-201ENST00000340888 FAM9AQ8IZU1 332 aaPredicted RBP32.67■■■□□ 2.82
PNCK-201ENST00000340888 ERICH3Q5RHP9 1530 aa32.61■■■□□ 2.81
PNCK-201ENST00000340888 EEA1Q15075 1411 aa32.57■■■□□ 2.8
PNCK-201ENST00000340888 CSRNP3Q8WYN3 585 aa32.56■■■□□ 2.8
PNCK-201ENST00000340888 CARMIL1Q5VZK9 1371 aa32.47■■■□□ 2.79
PNCK-201ENST00000340888 GRIN2AQ12879 1464 aa32.46■■■□□ 2.79
PNCK-201ENST00000340888 FHAD1B1AJZ9 1412 aa32.45■■■□□ 2.79
PNCK-201ENST00000340888 ERCC6L2Q5T890 1561 aa32.44■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms