RNA–Protein interactions for RNA: ENST00000463548.1

PNCK-219, Transcript of pregnancy up-regulated nonubiquitous CaM kinase, human

TSL 5

Gene PNCK, Length 783 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PNCK-219	ENST00000463548	NISCH	Q9Y2I1	1504 aa		45.58	■■■■■ 4.89
PNCK-219	ENST00000463548	ABCC9	O60706	1549 aa		41.14	■■■■■ 4.18
PNCK-219	ENST00000463548	CCDC180	Q9P1Z9	1646 aa		41.02	■■■■■ 4.16
PNCK-219	ENST00000463548	RB1CC1	Q8TDY2	1594 aa		39.12	■■■■□ 3.85
PNCK-219	ENST00000463548	NACAD	O15069	1562 aa		38.82	■■■■□ 3.8
PNCK-219	ENST00000463548	DNAJC5B	Q9UF47	199 aa		38.74	■■■■□ 3.79
PNCK-219	ENST00000463548	DCAF8L2	P0C7V8	631 aa		38.41	■■■■□ 3.74
PNCK-219	ENST00000463548	UNC13A	Q9UPW8	1703 aa		38.24	■■■■□ 3.71
PNCK-219	ENST00000463548	MYO15B	Q96JP2	1530 aa		38.24	■■■■□ 3.71
PNCK-219	ENST00000463548	PABPN1	Q86U42	306 aa	Known RBP eCLIP	38.24	■■■■□ 3.71
PNCK-219	ENST00000463548	BICRA	Q9NZM4	1560 aa		38	■■■■□ 3.67
PNCK-219	ENST00000463548	ZCCHC6	Q5VYS8	1495 aa	Known RBP	37.77	■■■■□ 3.64
PNCK-219	ENST00000463548	DCAF1	Q9Y4B6	1507 aa		37.67	■■■■□ 3.62
PNCK-219	ENST00000463548	SHROOM4	Q9ULL8	1493 aa		37.51	■■■■□ 3.59
PNCK-219	ENST00000463548	SCRIB	Q14160	1630 aa		37.33	■■■■□ 3.57
PNCK-219	ENST00000463548	CC2D2A	Q9P2K1	1620 aa		37.19	■■■■□ 3.54
PNCK-219	ENST00000463548	CECR2	Q9BXF3	1484 aa		37.1	■■■■□ 3.53
PNCK-219	ENST00000463548	EIF4G1	Q04637	1599 aa	Known RBP	37.08	■■■■□ 3.53
PNCK-219	ENST00000463548	NCAPD3	P42695	1498 aa		35.82	■■■■□ 3.32
PNCK-219	ENST00000463548	DNAJC5	Q9H3Z4	198 aa		35.72	■■■■□ 3.31
PNCK-219	ENST00000463548	ATAD2B	Q9ULI0	1458 aa		35.68	■■■■□ 3.3
PNCK-219	ENST00000463548	SMARCA4	P51532	1647 aa		35.61	■■■■□ 3.29
PNCK-219	ENST00000463548	CUX2	O14529	1486 aa		35.6	■■■■□ 3.29
PNCK-219	ENST00000463548	SMARCA2	P51531	1590 aa		35.58	■■■■□ 3.29
PNCK-219	ENST00000463548	HMGXB3	Q12766	1538 aa		35.57	■■■■□ 3.29
PNCK-219	ENST00000463548	ERCC6	Q03468	1493 aa		35.54	■■■■□ 3.28
PNCK-219	ENST00000463548	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	35.4	■■■■□ 3.26
PNCK-219	ENST00000463548	BAZ1B	Q9UIG0	1483 aa	Known RBP	35.32	■■■■□ 3.24
PNCK-219	ENST00000463548	NES	P48681	1621 aa		35.3	■■■■□ 3.24
PNCK-219	ENST00000463548	PEG3	Q9GZU2	1588 aa		35.3	■■■■□ 3.24
PNCK-219	ENST00000463548	MROH2B	Q7Z745	1585 aa		35.11	■■■■□ 3.21
PNCK-219	ENST00000463548	LAMC3	Q9Y6N6	1575 aa		35.05	■■■■□ 3.2
PNCK-219	ENST00000463548	THOC2	Q8NI27	1593 aa	Known RBP	35.04	■■■■□ 3.2
PNCK-219	ENST00000463548	KIF21A	Q7Z4S6	1674 aa		34.86	■■■■□ 3.17
PNCK-219	ENST00000463548	PDS5B	Q9NTI5	1447 aa		34.83	■■■■□ 3.17
PNCK-219	ENST00000463548	CADPS	Q9ULU8	1353 aa		34.7	■■■■□ 3.15
PNCK-219	ENST00000463548	WIZ	O95785	1651 aa		34.67	■■■■□ 3.14
PNCK-219	ENST00000463548	MRC2	Q9UBG0	1479 aa		34.57	■■■■□ 3.12
PNCK-219	ENST00000463548	WDR62	O43379	1518 aa		34.51	■■■■□ 3.12
PNCK-219	ENST00000463548	CEP164	Q9UPV0	1460 aa		34.38	■■■■□ 3.09
PNCK-219	ENST00000463548	FANCD2	Q9BXW9	1451 aa		34.32	■■■■□ 3.08
PNCK-219	ENST00000463548	RSF1	Q96T23	1441 aa	Predicted RBP	34.3	■■■■□ 3.08
PNCK-219	ENST00000463548	CFTR	P13569	1480 aa		34.29	■■■■□ 3.08
PNCK-219	ENST00000463548	TOP2A	P11388	1531 aa	Known RBP	34.25	■■■■□ 3.07
PNCK-219	ENST00000463548	URB2	Q14146	1524 aa	Known RBP	34.06	■■■■□ 3.04
PNCK-219	ENST00000463548	TRIM41	Q8WV44	630 aa		34.04	■■■■□ 3.04
PNCK-219	ENST00000463548	PRDM2	Q13029	1718 aa		33.96	■■■■□ 3.03
PNCK-219	ENST00000463548	OSCAR	Q8IYS5	282 aa		33.85	■■■■□ 3.01
PNCK-219	ENST00000463548	CCDC88B	A6NC98	1476 aa		33.83	■■■■□ 3.01
PNCK-219	ENST00000463548	IFT140	Q96RY7	1462 aa		33.7	■■■□□ 2.99
PNCK-219	ENST00000463548	TOPBP1	Q92547	1522 aa		33.66	■■■□□ 2.98
PNCK-219	ENST00000463548	ZNF608	Q9ULD9	1512 aa	Predicted RBP	33.66	■■■□□ 2.98
PNCK-219	ENST00000463548	ABCC8	Q09428	1581 aa		33.56	■■■□□ 2.96
PNCK-219	ENST00000463548	DNMBP	Q6XZF7	1577 aa		33.53	■■■□□ 2.96
PNCK-219	ENST00000463548	RIMBP3C	A6NJZ7	1639 aa		33.5	■■■□□ 2.95
PNCK-219	ENST00000463548	RIMBP3B	A6NNM3	1639 aa		33.5	■■■□□ 2.95
PNCK-219	ENST00000463548	RIMBP3	Q9UFD9	1639 aa		33.5	■■■□□ 2.95
PNCK-219	ENST00000463548	EIF4G3	O43432	1585 aa	Known RBP	33.49	■■■□□ 2.95
PNCK-219	ENST00000463548	TARBP1	Q13395	1621 aa	Known RBP	33.39	■■■□□ 2.93
PNCK-219	ENST00000463548	ARHGEF11	O15085	1522 aa		33.38	■■■□□ 2.93
PNCK-219	ENST00000463548	AQR	O60306	1485 aa	Known RBP eCLIP	33.31	■■■□□ 2.92	6e-8	■■■■■ 29.2
PNCK-219	ENST00000463548	POLA1	P09884	1462 aa	Predicted RBP	33.31	■■■□□ 2.92
PNCK-219	ENST00000463548	CHD1	O14646	1710 aa		33.27	■■■□□ 2.92
PNCK-219	ENST00000463548	RAD54L2	Q9Y4B4	1467 aa		33.16	■■■□□ 2.9
PNCK-219	ENST00000463548	SOGA1	O94964	1423 aa		33.11	■■■□□ 2.89
PNCK-219	ENST00000463548	WDR97	A6NE52	1622 aa		33.06	■■■□□ 2.88
PNCK-219	ENST00000463548	FGD5	Q6ZNL6	1462 aa		33.06	■■■□□ 2.88
PNCK-219	ENST00000463548	FBLN2	P98095	1184 aa		33.06	■■■□□ 2.88
PNCK-219	ENST00000463548	CYB5RL	Q6IPT4	315 aa		33.06	■■■□□ 2.88
PNCK-219	ENST00000463548	TDRD9	Q8NDG6	1382 aa	Known RBP	33.06	■■■□□ 2.88
PNCK-219	ENST00000463548	ARAP1	Q96P48	1450 aa		33.04	■■■□□ 2.88
PNCK-219	ENST00000463548	CUX1	P39880	1505 aa		33.01	■■■□□ 2.87
PNCK-219	ENST00000463548	SNAPC4	Q5SXM2	1469 aa		32.99	■■■□□ 2.87
PNCK-219	ENST00000463548	MAGI1	Q96QZ7	1491 aa	Predicted RBP	32.91	■■■□□ 2.86
PNCK-219	ENST00000463548	CLASP1	Q7Z460	1538 aa		32.91	■■■□□ 2.86
PNCK-219	ENST00000463548	GRIN2B	Q13224	1484 aa		32.87	■■■□□ 2.85
PNCK-219	ENST00000463548	SYNJ1	O43426	1573 aa		32.85	■■■□□ 2.85
PNCK-219	ENST00000463548	CHMP7	Q8WUX9	453 aa	Predicted RBP	32.82	■■■□□ 2.84
PNCK-219	ENST00000463548	SYNJ2	O15056	1496 aa		32.8	■■■□□ 2.84
PNCK-219	ENST00000463548	PBRM1	Q86U86	1689 aa		32.75	■■■□□ 2.83
PNCK-219	ENST00000463548	TRH	P20396	242 aa	Predicted RBP	32.74	■■■□□ 2.83
PNCK-219	ENST00000463548	GAPVD1	Q14C86	1478 aa		32.73	■■■□□ 2.83
PNCK-219	ENST00000463548	ABCA10	Q8WWZ4	1543 aa		32.69	■■■□□ 2.82
PNCK-219	ENST00000463548	ABCA5	Q8WWZ7	1642 aa		32.68	■■■□□ 2.82
PNCK-219	ENST00000463548	SUPT5H	O00267	1087 aa	Known RBP	32.54	■■■□□ 2.8
PNCK-219	ENST00000463548	WRN	Q14191	1432 aa	Predicted RBP eCLIP	32.49	■■■□□ 2.79
PNCK-219	ENST00000463548	GRIN2A	Q12879	1464 aa		32.46	■■■□□ 2.79
PNCK-219	ENST00000463548	ADAMTS12	P58397	1594 aa		32.45	■■■□□ 2.78
PNCK-219	ENST00000463548	BIVM-ERCC5	R4GMW8	1640 aa		32.44	■■■□□ 2.78
PNCK-219	ENST00000463548	TOP2B	Q02880	1626 aa		32.44	■■■□□ 2.78
PNCK-219	ENST00000463548	NUP160	Q12769	1436 aa		32.38	■■■□□ 2.77
PNCK-219	ENST00000463548	CEP170	Q5SW79	1584 aa		32.36	■■■□□ 2.77
PNCK-219	ENST00000463548	ERCC6L2	Q5T890	1561 aa		32.35	■■■□□ 2.77
PNCK-219	ENST00000463548	FHAD1	B1AJZ9	1412 aa		32.31	■■■□□ 2.76
PNCK-219	ENST00000463548	ERICH3	Q5RHP9	1530 aa		32.28	■■■□□ 2.76
PNCK-219	ENST00000463548	SHROOM2	Q13796	1616 aa		32.26	■■■□□ 2.76
PNCK-219	ENST00000463548	PRG4	Q92954	1404 aa	Predicted RBP	32.03	■■■□□ 2.72
PNCK-219	ENST00000463548	RUSC2	Q8N2Y8	1516 aa		32	■■■□□ 2.71
PNCK-219	ENST00000463548	JPH4	Q96JJ6	628 aa		31.96	■■■□□ 2.71
PNCK-219	ENST00000463548	AEBP2	Q6ZN18	517 aa	Predicted RBP	31.92	■■■□□ 2.7

Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms