RNA–Protein interactions for RNA: ENST00000534315.5

FOXRED1-218, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 1 (best)

Gene FOXRED1, Length 2,210 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-218ENST00000534315 NISCHQ9Y2I1 1504 aa29.65■■■□□ 2.34
FOXRED1-218ENST00000534315 CCDC180Q9P1Z9 1646 aa25.53■■□□□ 1.68
FOXRED1-218ENST00000534315 ZCCHC6Q5VYS8 1495 aaKnown RBP25.01■■□□□ 1.59
FOXRED1-218ENST00000534315 SHROOM4Q9ULL8 1493 aa24.74■■□□□ 1.55
FOXRED1-218ENST00000534315 DCAF8L2P0C7V8 631 aa24.47■■□□□ 1.51
FOXRED1-218ENST00000534315 DCAF1Q9Y4B6 1507 aa24.42■■□□□ 1.5
FOXRED1-218ENST00000534315 SUPT5HO00267 1087 aaKnown RBP24.03■■□□□ 1.44
FOXRED1-218ENST00000534315 MYO15BQ96JP2 1530 aa23.9■■□□□ 1.42
FOXRED1-218ENST00000534315 ABCC9O60706 1549 aa23.85■■□□□ 1.41
FOXRED1-218ENST00000534315 SCRIBQ14160 1630 aa23.71■■□□□ 1.39
FOXRED1-218ENST00000534315 NACADO15069 1562 aa23.67■■□□□ 1.38
FOXRED1-218ENST00000534315 RB1CC1Q8TDY2 1594 aa23.37■■□□□ 1.33
FOXRED1-218ENST00000534315 RSF1Q96T23 1441 aaPredicted RBP23.24■■□□□ 1.31
FOXRED1-218ENST00000534315 CHIC1Q5VXU3 224 aa23.21■■□□□ 1.31
FOXRED1-218ENST00000534315 CECR2Q9BXF3 1484 aa23.08■■□□□ 1.29
FOXRED1-218ENST00000534315 UNC13AQ9UPW8 1703 aa23■■□□□ 1.27
FOXRED1-218ENST00000534315 MROH2BQ7Z745 1585 aa22.99■■□□□ 1.27
FOXRED1-218ENST00000534315 WIZO95785 1651 aa22.84■■□□□ 1.25
FOXRED1-218ENST00000534315 BAZ1AQ9NRL2 1556 aaPredicted RBP22.82■■□□□ 1.24
FOXRED1-218ENST00000534315 BICRAQ9NZM4 1560 aa22.72■■□□□ 1.23
FOXRED1-218ENST00000534315 SMARCA4P51532 1647 aa22.69■■□□□ 1.22
FOXRED1-218ENST00000534315 PABPN1Q86U42 306 aaKnown RBP eCLIP22.64■■□□□ 1.21
FOXRED1-218ENST00000534315 TOP2AP11388 1531 aaKnown RBP22.54■■□□□ 1.2
FOXRED1-218ENST00000534315 TRIM41Q8WV44 630 aa22.48■■□□□ 1.19
FOXRED1-218ENST00000534315 LOC105371045A0A1W2PR82 267 aa22.43■■□□□ 1.18
FOXRED1-218ENST00000534315 EIF4G1Q04637 1599 aaKnown RBP22.41■■□□□ 1.18
FOXRED1-218ENST00000534315 SMARCA2P51531 1590 aa22.38■■□□□ 1.17
FOXRED1-218ENST00000534315 CCDC88BA6NC98 1476 aa22.36■■□□□ 1.17
FOXRED1-218ENST00000534315 PEG3Q9GZU2 1588 aa22.33■■□□□ 1.17
FOXRED1-218ENST00000534315 FAM9AQ8IZU1 332 aaPredicted RBP22.19■■□□□ 1.14
FOXRED1-218ENST00000534315 ATAD2BQ9ULI0 1458 aa22.19■■□□□ 1.14
FOXRED1-218ENST00000534315 ABCC8Q09428 1581 aa22.12■■□□□ 1.13
FOXRED1-218ENST00000534315 BAZ1BQ9UIG0 1483 aaKnown RBP22.1■■□□□ 1.13
FOXRED1-218ENST00000534315 EHMT2Q96KQ7 1210 aa21.94■■□□□ 1.1
FOXRED1-218ENST00000534315 PCGF6Q9BYE7 350 aa21.94■■□□□ 1.1
FOXRED1-218ENST00000534315 HMGXB3Q12766 1538 aa21.87■■□□□ 1.09
FOXRED1-218ENST00000534315 NCAPD3P42695 1498 aa21.86■■□□□ 1.09
FOXRED1-218ENST00000534315 WRNQ14191 1432 aaPredicted RBP eCLIP21.85■■□□□ 1.09
FOXRED1-218ENST00000534315 SOGA1O94964 1423 aa21.81■■□□□ 1.08
FOXRED1-218ENST00000534315 SYNJ1O43426 1573 aa21.77■■□□□ 1.08
FOXRED1-218ENST00000534315 EEA1Q15075 1411 aa21.72■■□□□ 1.07
FOXRED1-218ENST00000534315 RUSC2Q8N2Y8 1516 aa21.72■■□□□ 1.07
FOXRED1-218ENST00000534315 TRIM26Q12899 539 aaPredicted RBP21.71■■□□□ 1.07
FOXRED1-218ENST00000534315 HRCP23327 699 aa21.67■■□□□ 1.06
FOXRED1-218ENST00000534315 CSRNP3Q8WYN3 585 aa21.64■■□□□ 1.06
FOXRED1-218ENST00000534315 TOP2BQ02880 1626 aa21.58■■□□□ 1.05
FOXRED1-218ENST00000534315 CFTRP13569 1480 aa21.55■■□□□ 1.04
FOXRED1-218ENST00000534315 CC2D2AQ9P2K1 1620 aa21.55■■□□□ 1.04
FOXRED1-218ENST00000534315 TNIKQ9UKE5 1360 aa21.54■■□□□ 1.04
FOXRED1-218ENST00000534315 BIVM-ERCC5R4GMW8 1640 aa21.54■■□□□ 1.04
FOXRED1-218ENST00000534315 CEP162Q5TB80 1403 aa21.52■■□□□ 1.04
FOXRED1-218ENST00000534315 GOLGA3Q08378 1498 aa21.52■■□□□ 1.04
FOXRED1-218ENST00000534315 UBTFP17480 764 aaKnown RBP21.46■■□□□ 1.03
FOXRED1-218ENST00000534315 KIF21BO75037 1637 aa21.46■■□□□ 1.03
FOXRED1-218ENST00000534315 CEP164Q9UPV0 1460 aa21.45■■□□□ 1.02
FOXRED1-218ENST00000534315 CUX1P39880 1505 aa21.45■■□□□ 1.02
FOXRED1-218ENST00000534315 PRDM2Q13029 1718 aa21.44■■□□□ 1.02
FOXRED1-218ENST00000534315 PPARGC1BQ86YN6 1023 aaKnown RBP21.39■■□□□ 1.01
FOXRED1-218ENST00000534315 CADPSQ9ULU8 1353 aa21.38■■□□□ 1.01
FOXRED1-218ENST00000534315 RAPGEF2Q9Y4G8 1499 aa21.32■■□□□ 1
FOXRED1-218ENST00000534315 KIF27Q86VH2 1401 aa21.22■□□□□ 0.99
FOXRED1-218ENST00000534315 PRXQ9BXM0 1461 aa21.22■□□□□ 0.99
FOXRED1-218ENST00000534315 CLIP1P30622 1438 aa21.22■□□□□ 0.99
FOXRED1-218ENST00000534315 ERICH3Q5RHP9 1530 aa21.2■□□□□ 0.99
FOXRED1-218ENST00000534315 FANCD2Q9BXW9 1451 aa21.17■□□□□ 0.98
FOXRED1-218ENST00000534315 TTBK1Q5TCY1 1321 aaPredicted RBP21.14■□□□□ 0.97
FOXRED1-218ENST00000534315 FGD5Q6ZNL6 1462 aa21.13■□□□□ 0.97
FOXRED1-218ENST00000534315 NESP48681 1621 aa21.12■□□□□ 0.97
FOXRED1-218ENST00000534315 CUX2O14529 1486 aa21.1■□□□□ 0.97
FOXRED1-218ENST00000534315 VPS8Q8N3P4 1428 aa21.09■□□□□ 0.97
FOXRED1-218ENST00000534315 RANGAP1P46060 587 aaPredicted RBP21.07■□□□□ 0.96
FOXRED1-218ENST00000534315 ZEB1P37275 1124 aaPredicted RBP21.04■□□□□ 0.96
FOXRED1-218ENST00000534315 DNMBPQ6XZF7 1577 aa21.04■□□□□ 0.96
FOXRED1-218ENST00000534315 LAMC3Q9Y6N6 1575 aa21.03■□□□□ 0.96
FOXRED1-218ENST00000534315 IGF1RP08069 1367 aa21.01■□□□□ 0.95
FOXRED1-218ENST00000534315 TOPBP1Q92547 1522 aa21■□□□□ 0.95
FOXRED1-218ENST00000534315 DNAJC5BQ9UF47 199 aa20.98■□□□□ 0.95
FOXRED1-218ENST00000534315 ARAP1Q96P48 1450 aa20.96■□□□□ 0.95
FOXRED1-218ENST00000534315 POLA1P09884 1462 aaPredicted RBP20.95■□□□□ 0.94
FOXRED1-218ENST00000534315 RAD54L2Q9Y4B4 1467 aa20.93■□□□□ 0.94
FOXRED1-218ENST00000534315 CARMIL1Q5VZK9 1371 aa20.91■□□□□ 0.94
FOXRED1-218ENST00000534315 ABCA10Q8WWZ4 1543 aa20.9■□□□□ 0.94
FOXRED1-218ENST00000534315 URB2Q14146 1524 aaKnown RBP20.9■□□□□ 0.94
FOXRED1-218ENST00000534315 APLP2Q06481 763 aa20.89■□□□□ 0.94
FOXRED1-218ENST00000534315 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.88■□□□□ 0.93
FOXRED1-218ENST00000534315 PDS5BQ9NTI5 1447 aa20.87■□□□□ 0.93
FOXRED1-218ENST00000534315 ARHGAP35Q9NRY4 1499 aa20.85■□□□□ 0.93
FOXRED1-218ENST00000534315 KIF21AQ7Z4S6 1674 aa20.83■□□□□ 0.92
FOXRED1-218ENST00000534315 CCER1Q8TC90 406 aaPredicted RBP20.81■□□□□ 0.92
FOXRED1-218ENST00000534315 WDR97A6NE52 1622 aa20.8■□□□□ 0.92
FOXRED1-218ENST00000534315 CUL7Q14999 1698 aa20.75■□□□□ 0.91
FOXRED1-218ENST00000534315 ABCA5Q8WWZ7 1642 aa20.71■□□□□ 0.91
FOXRED1-218ENST00000534315 KANK4Q5T7N3 995 aaPredicted RBP20.69■□□□□ 0.9
FOXRED1-218ENST00000534315 HNRNPUL2Q1KMD3 747 aaKnown RBP20.68■□□□□ 0.9
FOXRED1-218ENST00000534315 TDRD9Q8NDG6 1382 aaKnown RBP20.68■□□□□ 0.9
FOXRED1-218ENST00000534315 GAPVD1Q14C86 1478 aa20.65■□□□□ 0.9
FOXRED1-218ENST00000534315 TARBP1Q13395 1621 aaKnown RBP20.63■□□□□ 0.89
FOXRED1-218ENST00000534315 CTTNBP2Q8WZ74 1663 aa20.63■□□□□ 0.89
FOXRED1-218ENST00000534315 MRC2Q9UBG0 1479 aa20.59■□□□□ 0.89
FOXRED1-218ENST00000534315 TIAM1Q13009 1591 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms