RNA–Protein interactions for RNA: ENST00000511206.5

HMGCR-209, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HMGCR, Length 3,395 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-209ENST00000511206 NISCHQ9Y2I1 1504 aa14.37□□□□□ -0.11
HMGCR-209ENST00000511206 AEBP2Q6ZN18 517 aaPredicted RBP12.42□□□□□ -0.42
HMGCR-209ENST00000511206 CCDC180Q9P1Z9 1646 aa12.26□□□□□ -0.45
HMGCR-209ENST00000511206 ZCCHC6Q5VYS8 1495 aaKnown RBP12.23□□□□□ -0.45
HMGCR-209ENST00000511206 SHROOM4Q9ULL8 1493 aa12.19□□□□□ -0.46
HMGCR-209ENST00000511206 SUPT5HO00267 1087 aaKnown RBP12.02□□□□□ -0.49
HMGCR-209ENST00000511206 MYO15BQ96JP2 1530 aa12.01□□□□□ -0.49
HMGCR-209ENST00000511206 HRCP23327 699 aa11.92□□□□□ -0.5
HMGCR-209ENST00000511206 CHIC1Q5VXU3 224 aa11.9□□□□□ -0.5
HMGCR-209ENST00000511206 DCAF1Q9Y4B6 1507 aa11.88□□□□□ -0.51
HMGCR-209ENST00000511206 PELP1Q8IZL8 1130 aaKnown RBP11.82□□□□□ -0.52
HMGCR-209ENST00000511206 PPARGC1BQ86YN6 1023 aaKnown RBP11.71□□□□□ -0.54
HMGCR-209ENST00000511206 PCGF6Q9BYE7 350 aa11.67□□□□□ -0.54
HMGCR-209ENST00000511206 ABCC9O60706 1549 aa11.62□□□□□ -0.55
HMGCR-209ENST00000511206 DCAF8L2P0C7V8 631 aa11.53□□□□□ -0.56
HMGCR-209ENST00000511206 LOC105371045A0A1W2PR82 267 aa11.49□□□□□ -0.57
HMGCR-209ENST00000511206 TRIM26Q12899 539 aaPredicted RBP11.47□□□□□ -0.57
HMGCR-209ENST00000511206 MYT1Q01538 1121 aa11.43□□□□□ -0.58
HMGCR-209ENST00000511206 RSF1Q96T23 1441 aaPredicted RBP11.41□□□□□ -0.58
HMGCR-209ENST00000511206 RB1CC1Q8TDY2 1594 aa11.39□□□□□ -0.59
HMGCR-209ENST00000511206 SCRIBQ14160 1630 aa11.37□□□□□ -0.59
HMGCR-209ENST00000511206 SCAF1Q9H7N4 1312 aaKnown RBP11.36□□□□□ -0.59
HMGCR-209ENST00000511206 ZEB1P37275 1124 aaPredicted RBP11.33□□□□□ -0.6
HMGCR-209ENST00000511206 TRIM41Q8WV44 630 aa11.22□□□□□ -0.61
HMGCR-209ENST00000511206 EIF4G1Q04637 1599 aaKnown RBP11.21□□□□□ -0.62
HMGCR-209ENST00000511206 NACADO15069 1562 aa11.19□□□□□ -0.62
HMGCR-209ENST00000511206 WIZO95785 1651 aa11.16□□□□□ -0.62
HMGCR-209ENST00000511206 MROH2BQ7Z745 1585 aa11.16□□□□□ -0.62
HMGCR-209ENST00000511206 BAZ1AQ9NRL2 1556 aaPredicted RBP11.15□□□□□ -0.62
HMGCR-209ENST00000511206 CECR2Q9BXF3 1484 aa11.14□□□□□ -0.63
HMGCR-209ENST00000511206 FAM9AQ8IZU1 332 aaPredicted RBP11.06□□□□□ -0.64
HMGCR-209ENST00000511206 GTF3C3Q9Y5Q9 886 aa11.02□□□□□ -0.64
HMGCR-209ENST00000511206 WRNQ14191 1432 aaPredicted RBP eCLIP11.01□□□□□ -0.65
HMGCR-209ENST00000511206 TOP2AP11388 1531 aaKnown RBP10.99□□□□□ -0.65
HMGCR-209ENST00000511206 NEUROD1Q13562 356 aa10.97□□□□□ -0.65
HMGCR-209ENST00000511206 ACIN1Q9UKV3 1341 aaKnown RBP10.96□□□□□ -0.66
HMGCR-209ENST00000511206 UNC13AQ9UPW8 1703 aa10.95□□□□□ -0.66
HMGCR-209ENST00000511206 SMARCA4P51532 1647 aa10.94□□□□□ -0.66
HMGCR-209ENST00000511206 SMARCA2P51531 1590 aa10.94□□□□□ -0.66
HMGCR-209ENST00000511206 ABCC8Q09428 1581 aa10.93□□□□□ -0.66
HMGCR-209ENST00000511206 CCDC88BA6NC98 1476 aa10.9□□□□□ -0.66
HMGCR-209ENST00000511206 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.9□□□□□ -0.66
HMGCR-209ENST00000511206 EHMT2Q96KQ7 1210 aa10.9□□□□□ -0.67
HMGCR-209ENST00000511206 CENPBP07199 599 aaPredicted RBP10.89□□□□□ -0.67
HMGCR-209ENST00000511206 CEP162Q5TB80 1403 aa10.88□□□□□ -0.67
HMGCR-209ENST00000511206 CCER1Q8TC90 406 aaPredicted RBP10.88□□□□□ -0.67
HMGCR-209ENST00000511206 TNIKQ9UKE5 1360 aa10.87□□□□□ -0.67
HMGCR-209ENST00000511206 EEA1Q15075 1411 aa10.86□□□□□ -0.67
HMGCR-209ENST00000511206 BCL11AQ9H165 835 aa10.83□□□□□ -0.67
HMGCR-209ENST00000511206 DIEXFQ68CQ4 756 aaKnown RBP10.83□□□□□ -0.68
HMGCR-209ENST00000511206 YTHDC1Q96MU7 727 aaKnown RBP10.83□□□□□ -0.68
HMGCR-209ENST00000511206 SOGA1O94964 1423 aa10.82□□□□□ -0.68
HMGCR-209ENST00000511206 KIF21BO75037 1637 aa10.79□□□□□ -0.68
HMGCR-209ENST00000511206 PEG3Q9GZU2 1588 aa10.78□□□□□ -0.68
HMGCR-209ENST00000511206 RUSC2Q8N2Y8 1516 aa10.78□□□□□ -0.68
HMGCR-209ENST00000511206 GOLGA3Q08378 1498 aa10.77□□□□□ -0.68
HMGCR-209ENST00000511206 CSRNP3Q8WYN3 585 aa10.72□□□□□ -0.69
HMGCR-209ENST00000511206 ZNF316A6NFI3 1004 aaPredicted RBP10.72□□□□□ -0.69
HMGCR-209ENST00000511206 SYNJ1O43426 1573 aa10.71□□□□□ -0.69
HMGCR-209ENST00000511206 TTBK1Q5TCY1 1321 aaPredicted RBP10.71□□□□□ -0.7
HMGCR-209ENST00000511206 CEP164Q9UPV0 1460 aa10.69□□□□□ -0.7
HMGCR-209ENST00000511206 BICRAQ9NZM4 1560 aa10.68□□□□□ -0.7
HMGCR-209ENST00000511206 BAZ1BQ9UIG0 1483 aaKnown RBP10.68□□□□□ -0.7
HMGCR-209ENST00000511206 SENP3Q9H4L4 574 aaPredicted RBP10.65□□□□□ -0.71
HMGCR-209ENST00000511206 SLC24A1O60721 1099 aa10.64□□□□□ -0.71
HMGCR-209ENST00000511206 VPS8Q8N3P4 1428 aa10.64□□□□□ -0.71
HMGCR-209ENST00000511206 PRKCSHP14314 528 aaPredicted RBP10.63□□□□□ -0.71
HMGCR-209ENST00000511206 UBTFP17480 764 aaKnown RBP10.62□□□□□ -0.71
HMGCR-209ENST00000511206 CLIP1P30622 1438 aa10.61□□□□□ -0.71
HMGCR-209ENST00000511206 BIVM-ERCC5R4GMW8 1640 aa10.6□□□□□ -0.71
HMGCR-209ENST00000511206 TOP2BQ02880 1626 aa10.59□□□□□ -0.71
HMGCR-209ENST00000511206 MIER1Q8N108 512 aa10.57□□□□□ -0.72
HMGCR-209ENST00000511206 RAPGEF2Q9Y4G8 1499 aa10.57□□□□□ -0.72
HMGCR-209ENST00000511206 ERICH3Q5RHP9 1530 aa10.56□□□□□ -0.72
HMGCR-209ENST00000511206 ANP32EQ9BTT0 268 aa10.54□□□□□ -0.72
HMGCR-209ENST00000511206 CLSPNQ9HAW4 1339 aa10.53□□□□□ -0.72
HMGCR-209ENST00000511206 ATAD2BQ9ULI0 1458 aa10.53□□□□□ -0.72
HMGCR-209ENST00000511206 HNRNPUL2Q1KMD3 747 aaKnown RBP10.51□□□□□ -0.73
HMGCR-209ENST00000511206 ARAP1Q96P48 1450 aa10.5□□□□□ -0.73
HMGCR-209ENST00000511206 CUX2O14529 1486 aa10.49□□□□□ -0.73
HMGCR-209ENST00000511206 PRXQ9BXM0 1461 aa10.49□□□□□ -0.73
HMGCR-209ENST00000511206 DHX57Q6P158 1386 aaKnown RBP10.48□□□□□ -0.73
HMGCR-209ENST00000511206 PHF23Q9BUL5 403 aaPredicted RBP10.46□□□□□ -0.73
HMGCR-209ENST00000511206 RRBP1Q9P2E9 1410 aaKnown RBP10.46□□□□□ -0.73
HMGCR-209ENST00000511206 PRDM2Q13029 1718 aa10.44□□□□□ -0.74
HMGCR-209ENST00000511206 APLP2Q06481 763 aa10.42□□□□□ -0.74
HMGCR-209ENST00000511206 PABPN1Q86U42 306 aaKnown RBP eCLIP10.4□□□□□ -0.75
HMGCR-209ENST00000511206 CUX1P39880 1505 aa10.39□□□□□ -0.75
HMGCR-209ENST00000511206 HMGXB3Q12766 1538 aa10.39□□□□□ -0.75
HMGCR-209ENST00000511206 MAP3K1Q13233 1512 aa10.36□□□□□ -0.75
HMGCR-209ENST00000511206 SUPT16HQ9Y5B9 1047 aaKnown RBP10.35□□□□□ -0.75
HMGCR-209ENST00000511206 ARHGAP35Q9NRY4 1499 aa10.35□□□□□ -0.75
HMGCR-209ENST00000511206 KANK4Q5T7N3 995 aaPredicted RBP10.35□□□□□ -0.75
HMGCR-209ENST00000511206 ERICH6Q7L0X2 663 aa10.35□□□□□ -0.75
HMGCR-209ENST00000511206 BCANQ96GW7 911 aa10.35□□□□□ -0.75
HMGCR-209ENST00000511206 MAPKBP1O60336 1514 aa10.35□□□□□ -0.75
HMGCR-209ENST00000511206 TIAM1Q13009 1591 aa10.33□□□□□ -0.76
HMGCR-209ENST00000511206 CCNB3Q8WWL7 1395 aa10.32□□□□□ -0.76
HMGCR-209ENST00000511206 TSHZ2Q9NRE2 1034 aa10.32□□□□□ -0.76
HMGCR-209ENST00000511206 CFAP43Q8NDM7 1665 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms