RNA–Protein interactions for RNA: ENST00000380888.4

LINC01597-201, Transcript of long intergenic non-protein coding RNA 1597, humanhuman

TSL 5 BASIC

Gene LINC01597, Length 4,472 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01597-201ENST00000380888 NISCHQ9Y2I1 1504 aa22.43■■□□□ 1.18
LINC01597-201ENST00000380888 DCAF8L2P0C7V8 631 aa21.29■■□□□ 1
LINC01597-201ENST00000380888 SHROOM4Q9ULL8 1493 aa20.56■□□□□ 0.88
LINC01597-201ENST00000380888 SUPT5HO00267 1087 aaKnown RBP20.47■□□□□ 0.87
LINC01597-201ENST00000380888 EHMT2Q96KQ7 1210 aa19.43■□□□□ 0.7
LINC01597-201ENST00000380888 FAM9AQ8IZU1 332 aaPredicted RBP19.17■□□□□ 0.66
LINC01597-201ENST00000380888 TRIM41Q8WV44 630 aa18.92■□□□□ 0.62
LINC01597-201ENST00000380888 ABCC9O60706 1549 aa18.89■□□□□ 0.61
LINC01597-201ENST00000380888 PCGF6Q9BYE7 350 aa18.84■□□□□ 0.61
LINC01597-201ENST00000380888 CHIC1Q5VXU3 224 aa18.79■□□□□ 0.6
LINC01597-201ENST00000380888 TTBK1Q5TCY1 1321 aaPredicted RBP18.7■□□□□ 0.58
LINC01597-201ENST00000380888 ZCCHC6Q5VYS8 1495 aaKnown RBP18.69■□□□□ 0.58
LINC01597-201ENST00000380888 LOC105371045A0A1W2PR82 267 aa18.63■□□□□ 0.57
LINC01597-201ENST00000380888 CCDC180Q9P1Z9 1646 aa18.58■□□□□ 0.56
LINC01597-201ENST00000380888 RANGAP1P46060 587 aaPredicted RBP18.57■□□□□ 0.56
LINC01597-201ENST00000380888 PABPN1Q86U42 306 aaKnown RBP eCLIP18.52■□□□□ 0.56
LINC01597-201ENST00000380888 APLP2Q06481 763 aa18.46■□□□□ 0.55
LINC01597-201ENST00000380888 UBTFP17480 764 aaKnown RBP18.44■□□□□ 0.54
LINC01597-201ENST00000380888 PPARGC1BQ86YN6 1023 aaKnown RBP18.43■□□□□ 0.54
LINC01597-201ENST00000380888 SCRIBQ14160 1630 aa18.32■□□□□ 0.52
LINC01597-201ENST00000380888 TRIM26Q12899 539 aaPredicted RBP18.16■□□□□ 0.5
LINC01597-201ENST00000380888 CCER1Q8TC90 406 aaPredicted RBP18.14■□□□□ 0.49
LINC01597-201ENST00000380888 ATP1B4Q9UN42 357 aaPredicted RBP18.11■□□□□ 0.49
LINC01597-201ENST00000380888 HRCP23327 699 aa18.03■□□□□ 0.48
LINC01597-201ENST00000380888 ZEB1P37275 1124 aaPredicted RBP18■□□□□ 0.47
LINC01597-201ENST00000380888 RSF1Q96T23 1441 aaPredicted RBP17.89■□□□□ 0.45
LINC01597-201ENST00000380888 DCAF1Q9Y4B6 1507 aa17.86■□□□□ 0.45
LINC01597-201ENST00000380888 MYO15BQ96JP2 1530 aa17.82■□□□□ 0.44
LINC01597-201ENST00000380888 HNRNPUL2Q1KMD3 747 aaKnown RBP17.79■□□□□ 0.44
LINC01597-201ENST00000380888 RB1CC1Q8TDY2 1594 aa17.79■□□□□ 0.44
LINC01597-201ENST00000380888 NACADO15069 1562 aa17.78■□□□□ 0.44
LINC01597-201ENST00000380888 ITGAEP38570 1179 aa17.76■□□□□ 0.43
LINC01597-201ENST00000380888 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.74■□□□□ 0.43
LINC01597-201ENST00000380888 CECR2Q9BXF3 1484 aa17.71■□□□□ 0.43
LINC01597-201ENST00000380888 CSRNP3Q8WYN3 585 aa17.7■□□□□ 0.42
LINC01597-201ENST00000380888 YTHDC1Q96MU7 727 aaKnown RBP17.5■□□□□ 0.39
LINC01597-201ENST00000380888 MROH2BQ7Z745 1585 aa17.48■□□□□ 0.39
LINC01597-201ENST00000380888 CENPBP07199 599 aaPredicted RBP17.45■□□□□ 0.38
LINC01597-201ENST00000380888 P3H3Q8IVL6 736 aa17.43■□□□□ 0.38
LINC01597-201ENST00000380888 BAZ1AQ9NRL2 1556 aaPredicted RBP17.43■□□□□ 0.38
LINC01597-201ENST00000380888 FAM50AQ14320 339 aaKnown RBP17.37■□□□□ 0.37
LINC01597-201ENST00000380888 BAZ1BQ9UIG0 1483 aaKnown RBP17.31■□□□□ 0.36
LINC01597-201ENST00000380888 WRNQ14191 1432 aaPredicted RBP eCLIP17.27■□□□□ 0.36
LINC01597-201ENST00000380888 WIZO95785 1651 aa17.26■□□□□ 0.35
LINC01597-201ENST00000380888 FBLN2P98095 1184 aa17.25■□□□□ 0.35
LINC01597-201ENST00000380888 DIEXFQ68CQ4 756 aaKnown RBP17.25■□□□□ 0.35
LINC01597-201ENST00000380888 ARID3CA6NKF2 412 aa17.23■□□□□ 0.35
LINC01597-201ENST00000380888 CCDC88BA6NC98 1476 aa17.22■□□□□ 0.35
LINC01597-201ENST00000380888 PELP1Q8IZL8 1130 aaKnown RBP17.19■□□□□ 0.34
LINC01597-201ENST00000380888 SOGA1O94964 1423 aa17.17■□□□□ 0.34
LINC01597-201ENST00000380888 NEUROD1Q13562 356 aa17.16■□□□□ 0.34
LINC01597-201ENST00000380888 ABCC8Q09428 1581 aa17.16■□□□□ 0.34
LINC01597-201ENST00000380888 CEP162Q5TB80 1403 aa17.16■□□□□ 0.34
LINC01597-201ENST00000380888 CLIP1P30622 1438 aa17.13■□□□□ 0.33
LINC01597-201ENST00000380888 EEA1Q15075 1411 aa17.1■□□□□ 0.33
LINC01597-201ENST00000380888 GOLGA3Q08378 1498 aa17.08■□□□□ 0.33
LINC01597-201ENST00000380888 TRIM52Q96A61 297 aa17.08■□□□□ 0.32
LINC01597-201ENST00000380888 MYT1LQ9UL68 1186 aa17.06■□□□□ 0.32
LINC01597-201ENST00000380888 POLR3GLQ9BT43 218 aa17.06■□□□□ 0.32
LINC01597-201ENST00000380888 TNIKQ9UKE5 1360 aa17.05■□□□□ 0.32
LINC01597-201ENST00000380888 CNGB1Q14028 1251 aaPredicted RBP17.04■□□□□ 0.32
LINC01597-201ENST00000380888 TOP2AP11388 1531 aaKnown RBP17.03■□□□□ 0.32
LINC01597-201ENST00000380888 ZNF316A6NFI3 1004 aaPredicted RBP17.01■□□□□ 0.31
LINC01597-201ENST00000380888 SMARCA4P51532 1647 aa16.99■□□□□ 0.31
LINC01597-201ENST00000380888 CEP164Q9UPV0 1460 aa16.96■□□□□ 0.31
LINC01597-201ENST00000380888 KIF27Q86VH2 1401 aa16.95■□□□□ 0.3
LINC01597-201ENST00000380888 SMARCA2P51531 1590 aa16.93■□□□□ 0.3
LINC01597-201ENST00000380888 ATAD2BQ9ULI0 1458 aa16.93■□□□□ 0.3
LINC01597-201ENST00000380888 NEFLP07196 543 aa16.88■□□□□ 0.29
LINC01597-201ENST00000380888 ZNF777Q9ULD5 760 aaPredicted RBP16.88■□□□□ 0.29
LINC01597-201ENST00000380888 RUSC2Q8N2Y8 1516 aa16.85■□□□□ 0.29
LINC01597-201ENST00000380888 ZNF326Q5BKZ1 582 aaKnown RBP16.83■□□□□ 0.28
LINC01597-201ENST00000380888 CHIC2Q9UKJ5 165 aa16.82■□□□□ 0.28
LINC01597-201ENST00000380888 CUX2O14529 1486 aa16.82■□□□□ 0.28
LINC01597-201ENST00000380888 MTUS2Q5JR59 1369 aa16.78■□□□□ 0.28
LINC01597-201ENST00000380888 CDK11AQ9UQ88 783 aaPredicted RBP16.77■□□□□ 0.28
LINC01597-201ENST00000380888 CHMP7Q8WUX9 453 aaPredicted RBP16.77■□□□□ 0.27
LINC01597-201ENST00000380888 CARMIL1Q5VZK9 1371 aa16.76■□□□□ 0.27
LINC01597-201ENST00000380888 GTF3C3Q9Y5Q9 886 aa16.75■□□□□ 0.27
LINC01597-201ENST00000380888 KANK4Q5T7N3 995 aaPredicted RBP16.7■□□□□ 0.26
LINC01597-201ENST00000380888 CADPSQ9ULU8 1353 aa16.69■□□□□ 0.26
LINC01597-201ENST00000380888 RAPGEF2Q9Y4G8 1499 aa16.68■□□□□ 0.26
LINC01597-201ENST00000380888 VPS8Q8N3P4 1428 aa16.67■□□□□ 0.26
LINC01597-201ENST00000380888 ANP32CO43423 234 aa16.66■□□□□ 0.26
LINC01597-201ENST00000380888 ACIN1Q9UKV3 1341 aaKnown RBP16.65■□□□□ 0.26
LINC01597-201ENST00000380888 RRP7BPQ9NSQ0 103 aa16.65■□□□□ 0.26
LINC01597-201ENST00000380888 TDRD9Q8NDG6 1382 aaKnown RBP16.65■□□□□ 0.26
LINC01597-201ENST00000380888 TONSLQ96HA7 1378 aa16.64■□□□□ 0.25
LINC01597-201ENST00000380888 HIRIP3Q9BW71 556 aaPredicted RBP16.64■□□□□ 0.25
LINC01597-201ENST00000380888 DDX10Q13206 875 aaKnown RBP16.62■□□□□ 0.25
LINC01597-201ENST00000380888 MIER1Q8N108 512 aa16.59■□□□□ 0.25
LINC01597-201ENST00000380888 ERCC6Q03468 1493 aa16.56■□□□□ 0.24
LINC01597-201ENST00000380888 BCANQ96GW7 911 aa16.55■□□□□ 0.24
LINC01597-201ENST00000380888 CCNB3Q8WWL7 1395 aa16.55■□□□□ 0.24
LINC01597-201ENST00000380888 EIF4G1Q04637 1599 aaKnown RBP16.54■□□□□ 0.24
LINC01597-201ENST00000380888 SLC4A1APQ9BWU0 796 aaKnown RBP16.53■□□□□ 0.24
LINC01597-201ENST00000380888 SIN3AQ96ST3 1273 aa16.53■□□□□ 0.24
LINC01597-201ENST00000380888 NCAPD3P42695 1498 aa16.52■□□□□ 0.24
LINC01597-201ENST00000380888 PDS5BQ9NTI5 1447 aa16.52■□□□□ 0.24
LINC01597-201ENST00000380888 FHAD1B1AJZ9 1412 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms