Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
RNF44Q7L0R7 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
RNF44Q7L0R7 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
RNF44Q7L0R7 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.49
RNF44Q7L0R7 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.49
RNF44Q7L0R7 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC24.39■■□□□ 1.49
RNF44Q7L0R7 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC24.38■■□□□ 1.49
RNF44Q7L0R7 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
RNF44Q7L0R7 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
RNF44Q7L0R7 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
RNF44Q7L0R7 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
RNF44Q7L0R7 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
RNF44Q7L0R7 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
RNF44Q7L0R7 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
RNF44Q7L0R7 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
RNF44Q7L0R7 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
RNF44Q7L0R7 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC24.35■■□□□ 1.49
RNF44Q7L0R7 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC24.35■■□□□ 1.49
RNF44Q7L0R7 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC24.34■■□□□ 1.49
RNF44Q7L0R7 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
RNF44Q7L0R7 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC24.34■■□□□ 1.49
RNF44Q7L0R7 PEX7-203ENST00000541292 945 ntTSL 5 BASIC24.34■■□□□ 1.49
RNF44Q7L0R7 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC24.34■■□□□ 1.49
RNF44Q7L0R7 METRNL-202ENST00000570778 967 ntTSL 5 BASIC24.33■■□□□ 1.49
RNF44Q7L0R7 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC24.33■■□□□ 1.49
RNF44Q7L0R7 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
RNF44Q7L0R7 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
RNF44Q7L0R7 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
RNF44Q7L0R7 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
RNF44Q7L0R7 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
RNF44Q7L0R7 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
RNF44Q7L0R7 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
RNF44Q7L0R7 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC24.31■■□□□ 1.48
RNF44Q7L0R7 AC139426.1-201ENST00000568218 2529 ntBASIC24.31■■□□□ 1.48
RNF44Q7L0R7 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC24.31■■□□□ 1.48
RNF44Q7L0R7 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
RNF44Q7L0R7 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC24.31■■□□□ 1.48
RNF44Q7L0R7 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC24.31■■□□□ 1.48
RNF44Q7L0R7 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
RNF44Q7L0R7 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
RNF44Q7L0R7 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
RNF44Q7L0R7 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
RNF44Q7L0R7 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
RNF44Q7L0R7 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
RNF44Q7L0R7 MIR4449-201ENST00000578365 66 ntBASIC24.3■■□□□ 1.48
RNF44Q7L0R7 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
RNF44Q7L0R7 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC24.29■■□□□ 1.48
RNF44Q7L0R7 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC24.29■■□□□ 1.48
RNF44Q7L0R7 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
RNF44Q7L0R7 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
RNF44Q7L0R7 AC008813.1-201ENST00000536597 885 ntBASIC24.29■■□□□ 1.48
RNF44Q7L0R7 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
RNF44Q7L0R7 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
RNF44Q7L0R7 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC24.29■■□□□ 1.48
RNF44Q7L0R7 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
RNF44Q7L0R7 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
RNF44Q7L0R7 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
RNF44Q7L0R7 RPS2-210ENST00000530225 765 ntTSL 2 BASIC24.28■■□□□ 1.48
RNF44Q7L0R7 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC24.28■■□□□ 1.48
RNF44Q7L0R7 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
RNF44Q7L0R7 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
RNF44Q7L0R7 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
RNF44Q7L0R7 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
RNF44Q7L0R7 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
RNF44Q7L0R7 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
RNF44Q7L0R7 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
RNF44Q7L0R7 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC24.26■■□□□ 1.47
RNF44Q7L0R7 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
RNF44Q7L0R7 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC24.25■■□□□ 1.47
RNF44Q7L0R7 AP002414.2-202ENST00000590929 1450 ntBASIC24.25■■□□□ 1.47
RNF44Q7L0R7 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC24.24■■□□□ 1.47
RNF44Q7L0R7 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC24.23■■□□□ 1.47
RNF44Q7L0R7 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
RNF44Q7L0R7 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
RNF44Q7L0R7 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
RNF44Q7L0R7 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
RNF44Q7L0R7 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
RNF44Q7L0R7 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC24.21■■□□□ 1.47
RNF44Q7L0R7 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC24.21■■□□□ 1.47
RNF44Q7L0R7 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC24.21■■□□□ 1.47
RNF44Q7L0R7 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
RNF44Q7L0R7 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC24.2■■□□□ 1.46
RNF44Q7L0R7 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
RNF44Q7L0R7 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
RNF44Q7L0R7 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
RNF44Q7L0R7 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
RNF44Q7L0R7 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC24.2■■□□□ 1.46
RNF44Q7L0R7 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
RNF44Q7L0R7 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
RNF44Q7L0R7 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
RNF44Q7L0R7 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
RNF44Q7L0R7 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
RNF44Q7L0R7 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
RNF44Q7L0R7 PROC-203ENST00000409048 1586 ntTSL 5 BASIC24.18■■□□□ 1.46
RNF44Q7L0R7 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
RNF44Q7L0R7 AC148477.6-201ENST00000623746 465 ntBASIC24.18■■□□□ 1.46
RNF44Q7L0R7 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
RNF44Q7L0R7 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC24.17■■□□□ 1.46
RNF44Q7L0R7 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
RNF44Q7L0R7 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms