RNA–Protein interactions for RNA: ENST00000595158.5

UBA52-204, Transcript of ubiquitin A-52 residue ribosomal protein fusion product 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene UBA52, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52-204ENST00000595158 NISCHQ9Y2I1 1504 aa62.37■■■■■ 7.58
UBA52-204ENST00000595158 CCDC180Q9P1Z9 1646 aa55.67■■■■■ 6.5
UBA52-204ENST00000595158 ABCC9O60706 1549 aa54.8■■■■■ 6.36
UBA52-204ENST00000595158 RB1CC1Q8TDY2 1594 aa52.55■■■■■ 6
UBA52-204ENST00000595158 NACADO15069 1562 aa52.42■■■■■ 5.98
UBA52-204ENST00000595158 DCAF8L2P0C7V8 631 aa52.07■■■■■ 5.93
UBA52-204ENST00000595158 MYO15BQ96JP2 1530 aa52.03■■■■■ 5.92
UBA52-204ENST00000595158 ZCCHC6Q5VYS8 1495 aaKnown RBP51.9■■■■■ 5.9
UBA52-204ENST00000595158 DCAF1Q9Y4B6 1507 aa51.64■■■■■ 5.86
UBA52-204ENST00000595158 UNC13AQ9UPW8 1703 aa51.38■■■■■ 5.82
UBA52-204ENST00000595158 PABPN1Q86U42 306 aaKnown RBP eCLIP51.09■■■■■ 5.77
UBA52-204ENST00000595158 BICRAQ9NZM4 1560 aa51.06■■■■■ 5.76
UBA52-204ENST00000595158 DNAJC5BQ9UF47 199 aa50.72■■■■■ 5.71
UBA52-204ENST00000595158 SCRIBQ14160 1630 aa50.69■■■■■ 5.7
UBA52-204ENST00000595158 SHROOM4Q9ULL8 1493 aa50.48■■■■■ 5.67
UBA52-204ENST00000595158 EIF4G1Q04637 1599 aaKnown RBP49.7■■■■■ 5.55
UBA52-204ENST00000595158 CC2D2AQ9P2K1 1620 aa49.59■■■■■ 5.53
UBA52-204ENST00000595158 CECR2Q9BXF3 1484 aa49.3■■■■■ 5.48
UBA52-204ENST00000595158 SMARCA4P51532 1647 aa48.5■■■■■ 5.35
UBA52-204ENST00000595158 NCAPD3P42695 1498 aa48.39■■■■■ 5.34
UBA52-204ENST00000595158 BAZ1AQ9NRL2 1556 aaPredicted RBP48.36■■■■■ 5.33
UBA52-204ENST00000595158 ATAD2BQ9ULI0 1458 aa48.34■■■■■ 5.33
UBA52-204ENST00000595158 SMARCA2P51531 1590 aa48.24■■■■■ 5.31
UBA52-204ENST00000595158 HMGXB3Q12766 1538 aa48.12■■■■■ 5.29
UBA52-204ENST00000595158 PEG3Q9GZU2 1588 aa48.08■■■■■ 5.29
UBA52-204ENST00000595158 MROH2BQ7Z745 1585 aa48.06■■■■■ 5.28
UBA52-204ENST00000595158 BAZ1BQ9UIG0 1483 aaKnown RBP47.87■■■■■ 5.25
UBA52-204ENST00000595158 WIZO95785 1651 aa47.5■■■■■ 5.19
UBA52-204ENST00000595158 RSF1Q96T23 1441 aaPredicted RBP47.35■■■■■ 5.17
UBA52-204ENST00000595158 NESP48681 1621 aa47.33■■■■■ 5.17
UBA52-204ENST00000595158 ERCC6Q03468 1493 aa47.22■■■■■ 5.15
UBA52-204ENST00000595158 LAMC3Q9Y6N6 1575 aa47.16■■■■■ 5.14
UBA52-204ENST00000595158 TOP2AP11388 1531 aaKnown RBP47■■■■■ 5.11
UBA52-204ENST00000595158 CUX2O14529 1486 aa46.96■■■■■ 5.11
UBA52-204ENST00000595158 CADPSQ9ULU8 1353 aa46.91■■■■■ 5.1
UBA52-204ENST00000595158 PDS5BQ9NTI5 1447 aa46.8■■■■■ 5.08
UBA52-204ENST00000595158 KIF21AQ7Z4S6 1674 aa46.75■■■■■ 5.07
UBA52-204ENST00000595158 THOC2Q8NI27 1593 aaKnown RBP46.75■■■■■ 5.07
UBA52-204ENST00000595158 CFTRP13569 1480 aa46.58■■■■■ 5.05
UBA52-204ENST00000595158 CCDC88BA6NC98 1476 aa46.42■■■■■ 5.02
UBA52-204ENST00000595158 MRC2Q9UBG0 1479 aa46.39■■■■■ 5.02
UBA52-204ENST00000595158 FANCD2Q9BXW9 1451 aa46.38■■■■■ 5.01
UBA52-204ENST00000595158 CEP164Q9UPV0 1460 aa46.35■■■■■ 5.01
UBA52-204ENST00000595158 WDR62O43379 1518 aa46.29■■■■■ 5
UBA52-204ENST00000595158 PRDM2Q13029 1718 aa46.17■■■■■ 4.98
UBA52-204ENST00000595158 DNAJC5Q9H3Z4 198 aa45.99■■■■■ 4.95
UBA52-204ENST00000595158 URB2Q14146 1524 aaKnown RBP45.98■■■■■ 4.95
UBA52-204ENST00000595158 SUPT5HO00267 1087 aaKnown RBP45.67■■■■■ 4.9
UBA52-204ENST00000595158 TOPBP1Q92547 1522 aa45.61■■■■■ 4.89
UBA52-204ENST00000595158 ABCC8Q09428 1581 aa45.54■■■■■ 4.88
UBA52-204ENST00000595158 DNMBPQ6XZF7 1577 aa45.52■■■■■ 4.88
UBA52-204ENST00000595158 IFT140Q96RY7 1462 aa45.41■■■■■ 4.86
UBA52-204ENST00000595158 ZNF608Q9ULD9 1512 aaPredicted RBP45.26■■■■■ 4.84
UBA52-204ENST00000595158 POLA1P09884 1462 aaPredicted RBP45.19■■■■■ 4.82
UBA52-204ENST00000595158 TARBP1Q13395 1621 aaKnown RBP45.18■■■■■ 4.82
UBA52-204ENST00000595158 CUX1P39880 1505 aa45.11■■■■■ 4.81
UBA52-204ENST00000595158 EIF4G3O43432 1585 aaKnown RBP45.07■■■■■ 4.8
UBA52-204ENST00000595158 FGD5Q6ZNL6 1462 aa45.01■■■■■ 4.8
UBA52-204ENST00000595158 RAD54L2Q9Y4B4 1467 aa44.98■■■■■ 4.79
UBA52-204ENST00000595158 SOGA1O94964 1423 aa44.94■■■■■ 4.79
UBA52-204ENST00000595158 AQRO60306 1485 aaKnown RBP eCLIP44.91■■■■■ 4.784e-8■■■■■ 30.6
UBA52-204ENST00000595158 OSCARQ8IYS5 282 aa44.86■■■■■ 4.77
UBA52-204ENST00000595158 WDR97A6NE52 1622 aa44.79■■■■■ 4.76
UBA52-204ENST00000595158 TDRD9Q8NDG6 1382 aaKnown RBP44.75■■■■■ 4.75
UBA52-204ENST00000595158 WRNQ14191 1432 aaPredicted RBP eCLIP44.63■■■■■ 4.732e-16■□□□□ 8
UBA52-204ENST00000595158 BIVM-ERCC5R4GMW8 1640 aa44.62■■■■■ 4.73
UBA52-204ENST00000595158 TOP2BQ02880 1626 aa44.61■■■■■ 4.73
UBA52-204ENST00000595158 SYNJ1O43426 1573 aa44.58■■■■■ 4.73
UBA52-204ENST00000595158 ABCA10Q8WWZ4 1543 aa44.57■■■■■ 4.73
UBA52-204ENST00000595158 CHD1O14646 1710 aa44.55■■■■■ 4.72
UBA52-204ENST00000595158 GRIN2BQ13224 1484 aa44.5■■■■■ 4.71
UBA52-204ENST00000595158 SNAPC4Q5SXM2 1469 aa44.5■■■■■ 4.71
UBA52-204ENST00000595158 ABCA5Q8WWZ7 1642 aa44.46■■■■■ 4.71
UBA52-204ENST00000595158 GAPVD1Q14C86 1478 aa44.44■■■■■ 4.7
UBA52-204ENST00000595158 MAGI1Q96QZ7 1491 aaPredicted RBP44.44■■■■■ 4.7
UBA52-204ENST00000595158 PBRM1Q86U86 1689 aa44.39■■■■■ 4.7
UBA52-204ENST00000595158 FBLN2P98095 1184 aa44.34■■■■■ 4.69
UBA52-204ENST00000595158 SYNJ2O15056 1496 aa44.27■■■■■ 4.68
UBA52-204ENST00000595158 RIMBP3CA6NJZ7 1639 aa44.25■■■■■ 4.67
UBA52-204ENST00000595158 RIMBP3BA6NNM3 1639 aa44.25■■■■■ 4.67
UBA52-204ENST00000595158 RIMBP3Q9UFD9 1639 aa44.25■■■■■ 4.67
UBA52-204ENST00000595158 ARHGEF11O15085 1522 aa44.21■■■■■ 4.67
UBA52-204ENST00000595158 CHMP7Q8WUX9 453 aaPredicted RBP44.19■■■■■ 4.66
UBA52-204ENST00000595158 TRIM41Q8WV44 630 aa44.18■■■■■ 4.66
UBA52-204ENST00000595158 CLASP1Q7Z460 1538 aa44.13■■■■■ 4.65
UBA52-204ENST00000595158 ADAMTS12P58397 1594 aa44.05■■■■■ 4.64
UBA52-204ENST00000595158 ERICH3Q5RHP9 1530 aa44.02■■■■■ 4.64
UBA52-204ENST00000595158 GRIN2AQ12879 1464 aa43.95■■■■■ 4.63
UBA52-204ENST00000595158 FHAD1B1AJZ9 1412 aa43.91■■■■■ 4.62
UBA52-204ENST00000595158 ARAP1Q96P48 1450 aa43.84■■■■■ 4.61
UBA52-204ENST00000595158 NUP160Q12769 1436 aa43.81■■■■■ 4.6
UBA52-204ENST00000595158 CEP170Q5SW79 1584 aa43.75■■■■■ 4.59
UBA52-204ENST00000595158 CYB5RLQ6IPT4 315 aa43.72■■■■■ 4.59
UBA52-204ENST00000595158 KIF27Q86VH2 1401 aa43.71■■■■■ 4.59
UBA52-204ENST00000595158 IGF1RP08069 1367 aa43.61■■■■■ 4.57
UBA52-204ENST00000595158 SHROOM2Q13796 1616 aa43.54■■■■■ 4.56
UBA52-204ENST00000595158 CUL7Q14999 1698 aa43.53■■■■■ 4.56
UBA52-204ENST00000595158 ERCC6L2Q5T890 1561 aa43.46■■■■■ 4.55
UBA52-204ENST00000595158 RUSC2Q8N2Y8 1516 aa43.42■■■■■ 4.54
UBA52-204ENST00000595158 CARMIL1Q5VZK9 1371 aa43.31■■■■■ 4.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms