RNA–Protein interactions for RNA: ENST00000278980.10

COMMD7-201, Transcript of COMM domain containing 7, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COMMD7, Length 1,900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD7-201ENST00000278980 NISCHQ9Y2I1 1504 aa56.73■■■■■ 6.67
COMMD7-201ENST00000278980 CCDC180Q9P1Z9 1646 aa49.19■■■■■ 5.46
COMMD7-201ENST00000278980 ZCCHC6Q5VYS8 1495 aaKnown RBP47.77■■■■■ 5.24
COMMD7-201ENST00000278980 DCAF1Q9Y4B6 1507 aa46.88■■■■■ 5.09
COMMD7-201ENST00000278980 DCAF8L2P0C7V8 631 aa46.77■■■■■ 5.08
COMMD7-201ENST00000278980 SHROOM4Q9ULL8 1493 aa46.74■■■■■ 5.07
COMMD7-201ENST00000278980 ABCC9O60706 1549 aa46.13■■■■■ 4.97
COMMD7-201ENST00000278980 MYO15BQ96JP2 1530 aa46.11■■■■■ 4.97
COMMD7-201ENST00000278980 NACADO15069 1562 aa45.71■■■■■ 4.91
COMMD7-201ENST00000278980 SCRIBQ14160 1630 aa45.39■■■■■ 4.86
COMMD7-201ENST00000278980 SUPT5HO00267 1087 aaKnown RBP45.23■■■■■ 4.83
COMMD7-201ENST00000278980 RB1CC1Q8TDY2 1594 aa45.21■■■■■ 4.83
COMMD7-201ENST00000278980 UNC13AQ9UPW8 1703 aa44.29■■■■■ 4.68
COMMD7-201ENST00000278980 RSF1Q96T23 1441 aaPredicted RBP44.23■■■■■ 4.67
COMMD7-201ENST00000278980 CECR2Q9BXF3 1484 aa44.06■■■■■ 4.64
COMMD7-201ENST00000278980 MROH2BQ7Z745 1585 aa43.86■■■■■ 4.61
COMMD7-201ENST00000278980 BICRAQ9NZM4 1560 aa43.82■■■■■ 4.61
COMMD7-201ENST00000278980 BAZ1AQ9NRL2 1556 aaPredicted RBP43.77■■■■■ 4.6
COMMD7-201ENST00000278980 PABPN1Q86U42 306 aaKnown RBP eCLIP43.63■■■■■ 4.57
COMMD7-201ENST00000278980 WIZO95785 1651 aa43.54■■■■■ 4.56
COMMD7-201ENST00000278980 CHIC1Q5VXU3 224 aa43.53■■■■■ 4.56
COMMD7-201ENST00000278980 SMARCA4P51532 1647 aa43.51■■■■■ 4.56
COMMD7-201ENST00000278980 TOP2AP11388 1531 aaKnown RBP43.1■■■■■ 4.49
COMMD7-201ENST00000278980 PEG3Q9GZU2 1588 aa42.92■■■■■ 4.46
COMMD7-201ENST00000278980 SMARCA2P51531 1590 aa42.71■■■■■ 4.43
COMMD7-201ENST00000278980 CCDC88BA6NC98 1476 aa42.68■■■■■ 4.42
COMMD7-201ENST00000278980 ATAD2BQ9ULI0 1458 aa42.66■■■■■ 4.42
COMMD7-201ENST00000278980 EIF4G1Q04637 1599 aaKnown RBP42.56■■■■■ 4.4
COMMD7-201ENST00000278980 BAZ1BQ9UIG0 1483 aaKnown RBP42.48■■■■■ 4.39
COMMD7-201ENST00000278980 TRIM41Q8WV44 630 aa42.47■■■■■ 4.39
COMMD7-201ENST00000278980 NCAPD3P42695 1498 aa42.19■■■■■ 4.34
COMMD7-201ENST00000278980 HMGXB3Q12766 1538 aa42.18■■■■■ 4.34
COMMD7-201ENST00000278980 ABCC8Q09428 1581 aa41.97■■■■■ 4.31
COMMD7-201ENST00000278980 LOC105371045A0A1W2PR82 267 aa41.91■■■■■ 4.3
COMMD7-201ENST00000278980 FAM9AQ8IZU1 332 aaPredicted RBP41.74■■■■■ 4.27
COMMD7-201ENST00000278980 CC2D2AQ9P2K1 1620 aa41.73■■■■■ 4.27
COMMD7-201ENST00000278980 WRNQ14191 1432 aaPredicted RBP eCLIP41.63■■■■■ 4.26
COMMD7-201ENST00000278980 SYNJ1O43426 1573 aa41.43■■■■■ 4.22
COMMD7-201ENST00000278980 CFTRP13569 1480 aa41.41■■■■■ 4.22
COMMD7-201ENST00000278980 EEA1Q15075 1411 aa41.3■■■■■ 4.2
COMMD7-201ENST00000278980 SOGA1O94964 1423 aa41.29■■■■■ 4.2
COMMD7-201ENST00000278980 PRDM2Q13029 1718 aa41.21■■■■■ 4.19
COMMD7-201ENST00000278980 TOP2BQ02880 1626 aa41.21■■■■■ 4.19
COMMD7-201ENST00000278980 CADPSQ9ULU8 1353 aa41.17■■■■■ 4.18
COMMD7-201ENST00000278980 EHMT2Q96KQ7 1210 aa41.16■■■■■ 4.18
COMMD7-201ENST00000278980 BIVM-ERCC5R4GMW8 1640 aa41.14■■■■■ 4.18
COMMD7-201ENST00000278980 RUSC2Q8N2Y8 1516 aa41.09■■■■■ 4.17
COMMD7-201ENST00000278980 CSRNP3Q8WYN3 585 aa41.04■■■■■ 4.16
COMMD7-201ENST00000278980 CUX1P39880 1505 aa40.98■■■■■ 4.15
COMMD7-201ENST00000278980 GOLGA3Q08378 1498 aa40.78■■■■■ 4.12
COMMD7-201ENST00000278980 TNIKQ9UKE5 1360 aa40.74■■■■■ 4.11
COMMD7-201ENST00000278980 FANCD2Q9BXW9 1451 aa40.74■■■■■ 4.11
COMMD7-201ENST00000278980 KIF21BO75037 1637 aa40.73■■■■■ 4.11
COMMD7-201ENST00000278980 CEP164Q9UPV0 1460 aa40.72■■■■■ 4.11
COMMD7-201ENST00000278980 LAMC3Q9Y6N6 1575 aa40.67■■■■■ 4.1
COMMD7-201ENST00000278980 NESP48681 1621 aa40.65■■■■■ 4.1
COMMD7-201ENST00000278980 UBTFP17480 764 aaKnown RBP40.6■■■■■ 4.09
COMMD7-201ENST00000278980 CEP162Q5TB80 1403 aa40.58■■■■■ 4.09
COMMD7-201ENST00000278980 PCGF6Q9BYE7 350 aa40.57■■■■■ 4.08
COMMD7-201ENST00000278980 KIF27Q86VH2 1401 aa40.54■■■■■ 4.08
COMMD7-201ENST00000278980 DNAJC5BQ9UF47 199 aa40.52■■■■■ 4.08
COMMD7-201ENST00000278980 FGD5Q6ZNL6 1462 aa40.47■■■■■ 4.07
COMMD7-201ENST00000278980 DNMBPQ6XZF7 1577 aa40.45■■■■■ 4.07
COMMD7-201ENST00000278980 RAPGEF2Q9Y4G8 1499 aa40.43■■■■■ 4.06
COMMD7-201ENST00000278980 TRIM26Q12899 539 aaPredicted RBP40.42■■■■■ 4.06
COMMD7-201ENST00000278980 PDS5BQ9NTI5 1447 aa40.37■■■■■ 4.05
COMMD7-201ENST00000278980 PRXQ9BXM0 1461 aa40.37■■■■■ 4.05
COMMD7-201ENST00000278980 ERICH3Q5RHP9 1530 aa40.36■■■■■ 4.05
COMMD7-201ENST00000278980 TOPBP1Q92547 1522 aa40.35■■■■■ 4.05
COMMD7-201ENST00000278980 CUX2O14529 1486 aa40.32■■■■■ 4.04
COMMD7-201ENST00000278980 URB2Q14146 1524 aaKnown RBP40.19■■■■■ 4.02
COMMD7-201ENST00000278980 POLA1P09884 1462 aaPredicted RBP40.19■■■■■ 4.02
COMMD7-201ENST00000278980 KIF21AQ7Z4S6 1674 aa40.15■■■■■ 4.02
COMMD7-201ENST00000278980 CLIP1P30622 1438 aa40.14■■■■■ 4.02
COMMD7-201ENST00000278980 ABCA10Q8WWZ4 1543 aa40.1■■■■■ 4.01
COMMD7-201ENST00000278980 IGF1RP08069 1367 aa40.1■■■■■ 4.01
COMMD7-201ENST00000278980 RAD54L2Q9Y4B4 1467 aa40.08■■■■■ 4.01
COMMD7-201ENST00000278980 PPARGC1BQ86YN6 1023 aaKnown RBP39.93■■■■□ 3.98
COMMD7-201ENST00000278980 CARMIL1Q5VZK9 1371 aa39.93■■■■□ 3.98
COMMD7-201ENST00000278980 WDR97A6NE52 1622 aa39.91■■■■□ 3.98
COMMD7-201ENST00000278980 VPS8Q8N3P4 1428 aa39.86■■■■□ 3.97
COMMD7-201ENST00000278980 MRC2Q9UBG0 1479 aa39.83■■■■□ 3.97
COMMD7-201ENST00000278980 RANGAP1P46060 587 aaPredicted RBP39.82■■■■□ 3.97
COMMD7-201ENST00000278980 HRCP23327 699 aa39.81■■■■□ 3.96
COMMD7-201ENST00000278980 CUL7Q14999 1698 aa39.75■■■■□ 3.95
COMMD7-201ENST00000278980 ABCA5Q8WWZ7 1642 aa39.73■■■■□ 3.95
COMMD7-201ENST00000278980 ARAP1Q96P48 1450 aa39.68■■■■□ 3.94
COMMD7-201ENST00000278980 TARBP1Q13395 1621 aaKnown RBP39.67■■■■□ 3.94
COMMD7-201ENST00000278980 TDRD9Q8NDG6 1382 aaKnown RBP39.64■■■■□ 3.94
COMMD7-201ENST00000278980 GAPVD1Q14C86 1478 aa39.64■■■■□ 3.94
COMMD7-201ENST00000278980 WDR62O43379 1518 aa39.58■■■■□ 3.93
COMMD7-201ENST00000278980 ARHGAP35Q9NRY4 1499 aa39.56■■■■□ 3.92
COMMD7-201ENST00000278980 TTBK1Q5TCY1 1321 aaPredicted RBP39.55■■■■□ 3.92
COMMD7-201ENST00000278980 APLP2Q06481 763 aa39.53■■■■□ 3.92
COMMD7-201ENST00000278980 ERCC6Q03468 1493 aa39.52■■■■□ 3.92
COMMD7-201ENST00000278980 IFT140Q96RY7 1462 aa39.42■■■■□ 3.9
COMMD7-201ENST00000278980 CTTNBP2Q8WZ74 1663 aa39.38■■■■□ 3.89
COMMD7-201ENST00000278980 PBRM1Q86U86 1689 aa39.37■■■■□ 3.89
COMMD7-201ENST00000278980 THOC2Q8NI27 1593 aaKnown RBP39.33■■■■□ 3.89
COMMD7-201ENST00000278980 AQRO60306 1485 aaKnown RBP eCLIP39.3■■■■□ 3.889e-11■■■■■ 29.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms