Protein–RNA interactions for Protein: Q5VWM6

PRAMEF13, Putative PRAME family member 13, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF13Q5VWM6 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC25.16■■□□□ 1.62
PRAMEF13Q5VWM6 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC25.16■■□□□ 1.62
PRAMEF13Q5VWM6 ABHD17AP4-201ENST00000411545 909 ntBASIC25.16■■□□□ 1.62
PRAMEF13Q5VWM6 AC127502.1-201ENST00000399971 1502 ntBASIC25.16■■□□□ 1.62
PRAMEF13Q5VWM6 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC25.15■■□□□ 1.62
PRAMEF13Q5VWM6 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
PRAMEF13Q5VWM6 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
PRAMEF13Q5VWM6 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
PRAMEF13Q5VWM6 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC25.13■■□□□ 1.61
PRAMEF13Q5VWM6 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC25.11■■□□□ 1.61
PRAMEF13Q5VWM6 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
PRAMEF13Q5VWM6 BOD1-206ENST00000480951 814 ntTSL 2 BASIC25.11■■□□□ 1.61
PRAMEF13Q5VWM6 CIB2-204ENST00000557846 934 ntTSL 3 BASIC25.11■■□□□ 1.61
PRAMEF13Q5VWM6 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC25.11■■□□□ 1.61
PRAMEF13Q5VWM6 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC25.11■■□□□ 1.61
PRAMEF13Q5VWM6 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC25.11■■□□□ 1.61
PRAMEF13Q5VWM6 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
PRAMEF13Q5VWM6 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC25.1■■□□□ 1.61
PRAMEF13Q5VWM6 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
PRAMEF13Q5VWM6 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PRAMEF13Q5VWM6 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
PRAMEF13Q5VWM6 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
PRAMEF13Q5VWM6 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC25.08■■□□□ 1.61
PRAMEF13Q5VWM6 AC139426.1-201ENST00000568218 2529 ntBASIC25.08■■□□□ 1.61
PRAMEF13Q5VWM6 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.61
PRAMEF13Q5VWM6 AL139393.2-201ENST00000608721 2025 ntBASIC25.08■■□□□ 1.61
PRAMEF13Q5VWM6 EI24-212ENST00000615917 1407 ntTSL 2 BASIC25.07■■□□□ 1.6
PRAMEF13Q5VWM6 MIR7108-201ENST00000614319 87 ntBASIC25.07■■□□□ 1.6
PRAMEF13Q5VWM6 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
PRAMEF13Q5VWM6 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC25.06■■□□□ 1.6
PRAMEF13Q5VWM6 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC25.06■■□□□ 1.6
PRAMEF13Q5VWM6 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC25.06■■□□□ 1.6
PRAMEF13Q5VWM6 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
PRAMEF13Q5VWM6 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC25.04■■□□□ 1.6
PRAMEF13Q5VWM6 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC25.04■■□□□ 1.6
PRAMEF13Q5VWM6 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
PRAMEF13Q5VWM6 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
PRAMEF13Q5VWM6 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC25.03■■□□□ 1.6
PRAMEF13Q5VWM6 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC25.03■■□□□ 1.6
PRAMEF13Q5VWM6 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
PRAMEF13Q5VWM6 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC25.01■■□□□ 1.59
PRAMEF13Q5VWM6 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC25.01■■□□□ 1.59
PRAMEF13Q5VWM6 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC25.01■■□□□ 1.59
PRAMEF13Q5VWM6 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
PRAMEF13Q5VWM6 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
PRAMEF13Q5VWM6 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
PRAMEF13Q5VWM6 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
PRAMEF13Q5VWM6 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC25■■□□□ 1.59
PRAMEF13Q5VWM6 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC25■■□□□ 1.59
PRAMEF13Q5VWM6 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
PRAMEF13Q5VWM6 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC25■■□□□ 1.59
PRAMEF13Q5VWM6 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
PRAMEF13Q5VWM6 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
PRAMEF13Q5VWM6 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC24.99■■□□□ 1.59
PRAMEF13Q5VWM6 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC24.99■■□□□ 1.59
PRAMEF13Q5VWM6 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
PRAMEF13Q5VWM6 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC24.98■■□□□ 1.59
PRAMEF13Q5VWM6 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC24.98■■□□□ 1.59
PRAMEF13Q5VWM6 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC24.98■■□□□ 1.59
PRAMEF13Q5VWM6 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
PRAMEF13Q5VWM6 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC24.98■■□□□ 1.59
PRAMEF13Q5VWM6 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
PRAMEF13Q5VWM6 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
PRAMEF13Q5VWM6 AP004833.2-201ENST00000532228 1454 ntBASIC24.96■■□□□ 1.59
PRAMEF13Q5VWM6 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
PRAMEF13Q5VWM6 DUX4L29-201ENST00000425409 679 ntBASIC24.95■■□□□ 1.58
PRAMEF13Q5VWM6 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC24.95■■□□□ 1.58
PRAMEF13Q5VWM6 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC24.94■■□□□ 1.58
PRAMEF13Q5VWM6 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
PRAMEF13Q5VWM6 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
PRAMEF13Q5VWM6 AC021231.2-201ENST00000594613 730 ntBASIC24.94■■□□□ 1.58
PRAMEF13Q5VWM6 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
PRAMEF13Q5VWM6 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC24.93■■□□□ 1.58
PRAMEF13Q5VWM6 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC24.93■■□□□ 1.58
PRAMEF13Q5VWM6 PVT1-219ENST00000523427 938 ntTSL 3 BASIC24.93■■□□□ 1.58
PRAMEF13Q5VWM6 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
PRAMEF13Q5VWM6 LINC00273-201ENST00000539813 1452 ntBASIC24.93■■□□□ 1.58
PRAMEF13Q5VWM6 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
PRAMEF13Q5VWM6 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
PRAMEF13Q5VWM6 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC24.93■■□□□ 1.58
PRAMEF13Q5VWM6 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
PRAMEF13Q5VWM6 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
PRAMEF13Q5VWM6 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC24.92■■□□□ 1.58
PRAMEF13Q5VWM6 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
PRAMEF13Q5VWM6 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
PRAMEF13Q5VWM6 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC24.92■■□□□ 1.58
PRAMEF13Q5VWM6 ZNRF2P2-203ENST00000454624 420 ntBASIC24.91■■□□□ 1.58
PRAMEF13Q5VWM6 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC24.91■■□□□ 1.58
PRAMEF13Q5VWM6 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
PRAMEF13Q5VWM6 HGH1-207ENST00000628266 258 ntTSL 5 BASIC24.9■■□□□ 1.58
PRAMEF13Q5VWM6 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC24.89■■□□□ 1.58
PRAMEF13Q5VWM6 CALM3-209ENST00000597743 577 ntTSL 4 BASIC24.89■■□□□ 1.58
PRAMEF13Q5VWM6 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC24.88■■□□□ 1.57
PRAMEF13Q5VWM6 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
PRAMEF13Q5VWM6 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC24.88■■□□□ 1.57
PRAMEF13Q5VWM6 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
PRAMEF13Q5VWM6 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC24.88■■□□□ 1.57
PRAMEF13Q5VWM6 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
PRAMEF13Q5VWM6 AC135983.2-203ENST00000454486 1613 ntBASIC24.87■■□□□ 1.57
PRAMEF13Q5VWM6 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms