RNA–Protein interactions for RNA: ENST00000532228.1

AP004833.2-201, humanhuman

BASIC

Gene AP004833.2, Length 1,454 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004833.2-201ENST00000532228 NISCHQ9Y2I1 1504 aa59.44■■■■■ 7.11
AP004833.2-201ENST00000532228 CCDC180Q9P1Z9 1646 aa52.12■■■■■ 5.93
AP004833.2-201ENST00000532228 ZCCHC6Q5VYS8 1495 aaKnown RBP49.86■■■■■ 5.57
AP004833.2-201ENST00000532228 DCAF1Q9Y4B6 1507 aa49.35■■■■■ 5.49
AP004833.2-201ENST00000532228 ABCC9O60706 1549 aa49.35■■■■■ 5.49
AP004833.2-201ENST00000532228 MYO15BQ96JP2 1530 aa48.98■■■■■ 5.43
AP004833.2-201ENST00000532228 DCAF8L2P0C7V8 631 aa48.9■■■■■ 5.42
AP004833.2-201ENST00000532228 NACADO15069 1562 aa48.65■■■■■ 5.38
AP004833.2-201ENST00000532228 RB1CC1Q8TDY2 1594 aa48.28■■■■■ 5.32
AP004833.2-201ENST00000532228 SHROOM4Q9ULL8 1493 aa47.81■■■■■ 5.24
AP004833.2-201ENST00000532228 SCRIBQ14160 1630 aa47.58■■■■■ 5.21
AP004833.2-201ENST00000532228 UNC13AQ9UPW8 1703 aa47.06■■■■■ 5.12
AP004833.2-201ENST00000532228 BICRAQ9NZM4 1560 aa46.72■■■■■ 5.07
AP004833.2-201ENST00000532228 PABPN1Q86U42 306 aaKnown RBP eCLIP46.38■■■■■ 5.02
AP004833.2-201ENST00000532228 CECR2Q9BXF3 1484 aa46.06■■■■■ 4.96
AP004833.2-201ENST00000532228 BAZ1AQ9NRL2 1556 aaPredicted RBP45.97■■■■■ 4.95
AP004833.2-201ENST00000532228 RSF1Q96T23 1441 aaPredicted RBP45.91■■■■■ 4.94
AP004833.2-201ENST00000532228 SUPT5HO00267 1087 aaKnown RBP45.87■■■■■ 4.93
AP004833.2-201ENST00000532228 MROH2BQ7Z745 1585 aa45.79■■■■■ 4.92
AP004833.2-201ENST00000532228 SMARCA4P51532 1647 aa45.73■■■■■ 4.91
AP004833.2-201ENST00000532228 EIF4G1Q04637 1599 aaKnown RBP45.36■■■■■ 4.85
AP004833.2-201ENST00000532228 PEG3Q9GZU2 1588 aa45.34■■■■■ 4.85
AP004833.2-201ENST00000532228 WIZO95785 1651 aa45.33■■■■■ 4.85
AP004833.2-201ENST00000532228 SMARCA2P51531 1590 aa45.16■■■■■ 4.82
AP004833.2-201ENST00000532228 ATAD2BQ9ULI0 1458 aa45.12■■■■■ 4.81
AP004833.2-201ENST00000532228 TOP2AP11388 1531 aaKnown RBP45.02■■■■■ 4.8
AP004833.2-201ENST00000532228 NCAPD3P42695 1498 aa44.91■■■■■ 4.78
AP004833.2-201ENST00000532228 BAZ1BQ9UIG0 1483 aaKnown RBP44.82■■■■■ 4.76
AP004833.2-201ENST00000532228 HMGXB3Q12766 1538 aa44.8■■■■■ 4.76
AP004833.2-201ENST00000532228 CC2D2AQ9P2K1 1620 aa44.74■■■■■ 4.75
AP004833.2-201ENST00000532228 CCDC88BA6NC98 1476 aa44.48■■■■■ 4.71
AP004833.2-201ENST00000532228 CHIC1Q5VXU3 224 aa43.86■■■■■ 4.61
AP004833.2-201ENST00000532228 DNAJC5BQ9UF47 199 aa43.83■■■■■ 4.61
AP004833.2-201ENST00000532228 CFTRP13569 1480 aa43.75■■■■■ 4.59
AP004833.2-201ENST00000532228 CADPSQ9ULU8 1353 aa43.66■■■■■ 4.58
AP004833.2-201ENST00000532228 PRDM2Q13029 1718 aa43.43■■■■■ 4.54
AP004833.2-201ENST00000532228 LAMC3Q9Y6N6 1575 aa43.41■■■■■ 4.54
AP004833.2-201ENST00000532228 TRIM41Q8WV44 630 aa43.33■■■■■ 4.53
AP004833.2-201ENST00000532228 ABCC8Q09428 1581 aa43.27■■■■■ 4.52
AP004833.2-201ENST00000532228 WRNQ14191 1432 aaPredicted RBP eCLIP43.24■■■■■ 4.51
AP004833.2-201ENST00000532228 NESP48681 1621 aa43.18■■■■■ 4.5
AP004833.2-201ENST00000532228 FANCD2Q9BXW9 1451 aa43.11■■■■■ 4.49
AP004833.2-201ENST00000532228 PDS5BQ9NTI5 1447 aa43.09■■■■■ 4.49
AP004833.2-201ENST00000532228 SYNJ1O43426 1573 aa42.97■■■■■ 4.47
AP004833.2-201ENST00000532228 TOP2BQ02880 1626 aa42.96■■■■■ 4.47
AP004833.2-201ENST00000532228 BIVM-ERCC5R4GMW8 1640 aa42.92■■■■■ 4.46
AP004833.2-201ENST00000532228 CEP164Q9UPV0 1460 aa42.9■■■■■ 4.46
AP004833.2-201ENST00000532228 CUX1P39880 1505 aa42.86■■■■■ 4.45
AP004833.2-201ENST00000532228 DNMBPQ6XZF7 1577 aa42.69■■■■■ 4.42
AP004833.2-201ENST00000532228 KIF21AQ7Z4S6 1674 aa42.68■■■■■ 4.42
AP004833.2-201ENST00000532228 TOPBP1Q92547 1522 aa42.6■■■■■ 4.41
AP004833.2-201ENST00000532228 EEA1Q15075 1411 aa42.58■■■■■ 4.41
AP004833.2-201ENST00000532228 URB2Q14146 1524 aaKnown RBP42.55■■■■■ 4.4
AP004833.2-201ENST00000532228 MRC2Q9UBG0 1479 aa42.51■■■■■ 4.4
AP004833.2-201ENST00000532228 FGD5Q6ZNL6 1462 aa42.46■■■■■ 4.39
AP004833.2-201ENST00000532228 ERCC6Q03468 1493 aa42.44■■■■■ 4.38
AP004833.2-201ENST00000532228 SOGA1O94964 1423 aa42.44■■■■■ 4.38
AP004833.2-201ENST00000532228 POLA1P09884 1462 aaPredicted RBP42.35■■■■■ 4.37
AP004833.2-201ENST00000532228 WDR62O43379 1518 aa42.31■■■■■ 4.36
AP004833.2-201ENST00000532228 FAM9AQ8IZU1 332 aaPredicted RBP42.29■■■■■ 4.36
AP004833.2-201ENST00000532228 KIF27Q86VH2 1401 aa42.24■■■■■ 4.35
AP004833.2-201ENST00000532228 RUSC2Q8N2Y8 1516 aa42.23■■■■■ 4.35
AP004833.2-201ENST00000532228 CSRNP3Q8WYN3 585 aa42.21■■■■■ 4.35
AP004833.2-201ENST00000532228 THOC2Q8NI27 1593 aaKnown RBP42.2■■■■■ 4.35
AP004833.2-201ENST00000532228 ABCA10Q8WWZ4 1543 aa42.19■■■■■ 4.34
AP004833.2-201ENST00000532228 CUX2O14529 1486 aa42.1■■■■■ 4.33
AP004833.2-201ENST00000532228 RAD54L2Q9Y4B4 1467 aa42.1■■■■■ 4.33
AP004833.2-201ENST00000532228 WDR97A6NE52 1622 aa42.01■■■■■ 4.32
AP004833.2-201ENST00000532228 TARBP1Q13395 1621 aaKnown RBP42■■■■■ 4.31
AP004833.2-201ENST00000532228 LOC105371045A0A1W2PR82 267 aa41.98■■■■■ 4.31
AP004833.2-201ENST00000532228 IFT140Q96RY7 1462 aa41.97■■■■■ 4.31
AP004833.2-201ENST00000532228 KIF21BO75037 1637 aa41.91■■■■■ 4.3
AP004833.2-201ENST00000532228 IGF1RP08069 1367 aa41.86■■■■■ 4.29
AP004833.2-201ENST00000532228 PRXQ9BXM0 1461 aa41.84■■■■■ 4.29
AP004833.2-201ENST00000532228 GOLGA3Q08378 1498 aa41.82■■■■■ 4.29
AP004833.2-201ENST00000532228 ABCA5Q8WWZ7 1642 aa41.82■■■■■ 4.29
AP004833.2-201ENST00000532228 ERICH3Q5RHP9 1530 aa41.77■■■■■ 4.28
AP004833.2-201ENST00000532228 GAPVD1Q14C86 1478 aa41.76■■■■■ 4.28
AP004833.2-201ENST00000532228 TDRD9Q8NDG6 1382 aaKnown RBP41.74■■■■■ 4.27
AP004833.2-201ENST00000532228 TNIKQ9UKE5 1360 aa41.65■■■■■ 4.26
AP004833.2-201ENST00000532228 CARMIL1Q5VZK9 1371 aa41.63■■■■■ 4.26
AP004833.2-201ENST00000532228 CUL7Q14999 1698 aa41.62■■■■■ 4.25
AP004833.2-201ENST00000532228 RAPGEF2Q9Y4G8 1499 aa41.62■■■■■ 4.25
AP004833.2-201ENST00000532228 GRIN2BQ13224 1484 aa41.55■■■■■ 4.24
AP004833.2-201ENST00000532228 ZNF608Q9ULD9 1512 aaPredicted RBP41.55■■■■■ 4.24
AP004833.2-201ENST00000532228 AQRO60306 1485 aaKnown RBP eCLIP41.54■■■■■ 4.24
AP004833.2-201ENST00000532228 UBTFP17480 764 aaKnown RBP41.52■■■■■ 4.24
AP004833.2-201ENST00000532228 EHMT2Q96KQ7 1210 aa41.51■■■■■ 4.24
AP004833.2-201ENST00000532228 PBRM1Q86U86 1689 aa41.47■■■■■ 4.23
AP004833.2-201ENST00000532228 EIF4G3O43432 1585 aaKnown RBP41.46■■■■■ 4.23
AP004833.2-201ENST00000532228 FHAD1B1AJZ9 1412 aa41.36■■■■■ 4.21
AP004833.2-201ENST00000532228 ADAMTS12P58397 1594 aa41.29■■■■■ 4.2
AP004833.2-201ENST00000532228 MAGI1Q96QZ7 1491 aaPredicted RBP41.28■■■■■ 4.2
AP004833.2-201ENST00000532228 CEP162Q5TB80 1403 aa41.28■■■■■ 4.2
AP004833.2-201ENST00000532228 SNAPC4Q5SXM2 1469 aa41.2■■■■■ 4.19
AP004833.2-201ENST00000532228 CLIP1P30622 1438 aa41.09■■■■■ 4.17
AP004833.2-201ENST00000532228 SYNJ2O15056 1496 aa41.08■■■■■ 4.17
AP004833.2-201ENST00000532228 GRIN2AQ12879 1464 aa41■■■■■ 4.15
AP004833.2-201ENST00000532228 CTTNBP2Q8WZ74 1663 aa40.99■■■■■ 4.15
AP004833.2-201ENST00000532228 CHMP7Q8WUX9 453 aaPredicted RBP40.92■■■■■ 4.14
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms