RNA–Protein interactions for RNA: ENST00000555619.5

NPC2-207, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NPC2, Length 1,035 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-207ENST00000555619 NISCHQ9Y2I1 1504 aa60.61■■■■■ 7.29
NPC2-207ENST00000555619 CCDC180Q9P1Z9 1646 aa53.19■■■■■ 6.11
NPC2-207ENST00000555619 ABCC9O60706 1549 aa51.39■■■■■ 5.82
NPC2-207ENST00000555619 ZCCHC6Q5VYS8 1495 aaKnown RBP50.67■■■■■ 5.7
NPC2-207ENST00000555619 DCAF8L2P0C7V8 631 aa50.56■■■■■ 5.68
NPC2-207ENST00000555619 DCAF1Q9Y4B6 1507 aa50.09■■■■■ 5.61
NPC2-207ENST00000555619 NACADO15069 1562 aa49.89■■■■■ 5.58
NPC2-207ENST00000555619 MYO15BQ96JP2 1530 aa49.88■■■■■ 5.58
NPC2-207ENST00000555619 RB1CC1Q8TDY2 1594 aa49.7■■■■■ 5.55
NPC2-207ENST00000555619 SCRIBQ14160 1630 aa48.84■■■■■ 5.41
NPC2-207ENST00000555619 SHROOM4Q9ULL8 1493 aa48.8■■■■■ 5.4
NPC2-207ENST00000555619 UNC13AQ9UPW8 1703 aa48.43■■■■■ 5.34
NPC2-207ENST00000555619 PABPN1Q86U42 306 aaKnown RBP eCLIP48.37■■■■■ 5.33
NPC2-207ENST00000555619 BICRAQ9NZM4 1560 aa48.2■■■■■ 5.31
NPC2-207ENST00000555619 CECR2Q9BXF3 1484 aa47.21■■■■■ 5.15
NPC2-207ENST00000555619 BAZ1AQ9NRL2 1556 aaPredicted RBP46.85■■■■■ 5.09
NPC2-207ENST00000555619 EIF4G1Q04637 1599 aaKnown RBP46.84■■■■■ 5.09
NPC2-207ENST00000555619 MROH2BQ7Z745 1585 aa46.79■■■■■ 5.08
NPC2-207ENST00000555619 SMARCA4P51532 1647 aa46.73■■■■■ 5.07
NPC2-207ENST00000555619 RSF1Q96T23 1441 aaPredicted RBP46.67■■■■■ 5.06
NPC2-207ENST00000555619 SUPT5HO00267 1087 aaKnown RBP46.49■■■■■ 5.03
NPC2-207ENST00000555619 CC2D2AQ9P2K1 1620 aa46.39■■■■■ 5.02
NPC2-207ENST00000555619 DNAJC5BQ9UF47 199 aa46.37■■■■■ 5.01
NPC2-207ENST00000555619 ATAD2BQ9ULI0 1458 aa46.33■■■■■ 5.01
NPC2-207ENST00000555619 WIZO95785 1651 aa46.27■■■■■ 5
NPC2-207ENST00000555619 SMARCA2P51531 1590 aa46.22■■■■■ 4.99
NPC2-207ENST00000555619 PEG3Q9GZU2 1588 aa46.21■■■■■ 4.99
NPC2-207ENST00000555619 NCAPD3P42695 1498 aa46.12■■■■■ 4.97
NPC2-207ENST00000555619 BAZ1BQ9UIG0 1483 aaKnown RBP45.99■■■■■ 4.95
NPC2-207ENST00000555619 HMGXB3Q12766 1538 aa45.87■■■■■ 4.93
NPC2-207ENST00000555619 TOP2AP11388 1531 aaKnown RBP45.82■■■■■ 4.92
NPC2-207ENST00000555619 CCDC88BA6NC98 1476 aa45.4■■■■■ 4.86
NPC2-207ENST00000555619 CADPSQ9ULU8 1353 aa44.9■■■■■ 4.78
NPC2-207ENST00000555619 CFTRP13569 1480 aa44.78■■■■■ 4.76
NPC2-207ENST00000555619 NESP48681 1621 aa44.78■■■■■ 4.76
NPC2-207ENST00000555619 LAMC3Q9Y6N6 1575 aa44.62■■■■■ 4.73
NPC2-207ENST00000555619 PDS5BQ9NTI5 1447 aa44.42■■■■■ 4.7
NPC2-207ENST00000555619 FANCD2Q9BXW9 1451 aa44.35■■■■■ 4.69
NPC2-207ENST00000555619 PRDM2Q13029 1718 aa44.2■■■■■ 4.67
NPC2-207ENST00000555619 ERCC6Q03468 1493 aa44.17■■■■■ 4.66
NPC2-207ENST00000555619 CEP164Q9UPV0 1460 aa44.15■■■■■ 4.66
NPC2-207ENST00000555619 KIF21AQ7Z4S6 1674 aa44.06■■■■■ 4.64
NPC2-207ENST00000555619 ABCC8Q09428 1581 aa44.02■■■■■ 4.64
NPC2-207ENST00000555619 CHIC1Q5VXU3 224 aa43.95■■■■■ 4.63
NPC2-207ENST00000555619 WRNQ14191 1432 aaPredicted RBP eCLIP43.95■■■■■ 4.63
NPC2-207ENST00000555619 MRC2Q9UBG0 1479 aa43.88■■■■■ 4.61
NPC2-207ENST00000555619 URB2Q14146 1524 aaKnown RBP43.84■■■■■ 4.61
NPC2-207ENST00000555619 CUX1P39880 1505 aa43.81■■■■■ 4.6
NPC2-207ENST00000555619 TRIM41Q8WV44 630 aa43.79■■■■■ 4.6
NPC2-207ENST00000555619 TOPBP1Q92547 1522 aa43.73■■■■■ 4.59
NPC2-207ENST00000555619 SYNJ1O43426 1573 aa43.72■■■■■ 4.59
NPC2-207ENST00000555619 DNMBPQ6XZF7 1577 aa43.71■■■■■ 4.59
NPC2-207ENST00000555619 THOC2Q8NI27 1593 aaKnown RBP43.67■■■■■ 4.58
NPC2-207ENST00000555619 WDR62O43379 1518 aa43.63■■■■■ 4.57
NPC2-207ENST00000555619 TOP2BQ02880 1626 aa43.62■■■■■ 4.57
NPC2-207ENST00000555619 BIVM-ERCC5R4GMW8 1640 aa43.54■■■■■ 4.56
NPC2-207ENST00000555619 FGD5Q6ZNL6 1462 aa43.51■■■■■ 4.56
NPC2-207ENST00000555619 POLA1P09884 1462 aaPredicted RBP43.44■■■■■ 4.54
NPC2-207ENST00000555619 SOGA1O94964 1423 aa43.37■■■■■ 4.53
NPC2-207ENST00000555619 RAD54L2Q9Y4B4 1467 aa43.33■■■■■ 4.53
NPC2-207ENST00000555619 CUX2O14529 1486 aa43.32■■■■■ 4.53
NPC2-207ENST00000555619 IFT140Q96RY7 1462 aa43.19■■■■■ 4.51
NPC2-207ENST00000555619 TARBP1Q13395 1621 aaKnown RBP43.09■■■■■ 4.49
NPC2-207ENST00000555619 ABCA10Q8WWZ4 1543 aa43.09■■■■■ 4.49
NPC2-207ENST00000555619 TDRD9Q8NDG6 1382 aaKnown RBP43.05■■■■■ 4.48
NPC2-207ENST00000555619 ZNF608Q9ULD9 1512 aaPredicted RBP42.99■■■■■ 4.47
NPC2-207ENST00000555619 FAM9AQ8IZU1 332 aaPredicted RBP42.97■■■■■ 4.47
NPC2-207ENST00000555619 RUSC2Q8N2Y8 1516 aa42.97■■■■■ 4.47
NPC2-207ENST00000555619 KIF27Q86VH2 1401 aa42.95■■■■■ 4.47
NPC2-207ENST00000555619 AQRO60306 1485 aaKnown RBP eCLIP42.93■■■■■ 4.46
NPC2-207ENST00000555619 WDR97A6NE52 1622 aa42.87■■■■■ 4.45
NPC2-207ENST00000555619 GAPVD1Q14C86 1478 aa42.82■■■■■ 4.45
NPC2-207ENST00000555619 EEA1Q15075 1411 aa42.77■■■■■ 4.44
NPC2-207ENST00000555619 CSRNP3Q8WYN3 585 aa42.74■■■■■ 4.43
NPC2-207ENST00000555619 ABCA5Q8WWZ7 1642 aa42.74■■■■■ 4.43
NPC2-207ENST00000555619 IGF1RP08069 1367 aa42.73■■■■■ 4.43
NPC2-207ENST00000555619 EIF4G3O43432 1585 aaKnown RBP42.7■■■■■ 4.43
NPC2-207ENST00000555619 GRIN2BQ13224 1484 aa42.66■■■■■ 4.42
NPC2-207ENST00000555619 ERICH3Q5RHP9 1530 aa42.55■■■■■ 4.4
NPC2-207ENST00000555619 CARMIL1Q5VZK9 1371 aa42.48■■■■■ 4.39
NPC2-207ENST00000555619 SNAPC4Q5SXM2 1469 aa42.48■■■■■ 4.39
NPC2-207ENST00000555619 PBRM1Q86U86 1689 aa42.46■■■■■ 4.39
NPC2-207ENST00000555619 EHMT2Q96KQ7 1210 aa42.4■■■■■ 4.38
NPC2-207ENST00000555619 FHAD1B1AJZ9 1412 aa42.37■■■■■ 4.37
NPC2-207ENST00000555619 MAGI1Q96QZ7 1491 aaPredicted RBP42.37■■■■■ 4.37
NPC2-207ENST00000555619 PRXQ9BXM0 1461 aa42.37■■■■■ 4.37
NPC2-207ENST00000555619 FBLN2P98095 1184 aa42.32■■■■■ 4.37
NPC2-207ENST00000555619 CHMP7Q8WUX9 453 aaPredicted RBP42.3■■■■■ 4.36
NPC2-207ENST00000555619 CUL7Q14999 1698 aa42.28■■■■■ 4.36
NPC2-207ENST00000555619 ADAMTS12P58397 1594 aa42.28■■■■■ 4.36
NPC2-207ENST00000555619 RAPGEF2Q9Y4G8 1499 aa42.27■■■■■ 4.36
NPC2-207ENST00000555619 LOC105371045A0A1W2PR82 267 aa42.26■■■■■ 4.36
NPC2-207ENST00000555619 SYNJ2O15056 1496 aa42.23■■■■■ 4.35
NPC2-207ENST00000555619 KIF21BO75037 1637 aa42.17■■■■■ 4.34
NPC2-207ENST00000555619 GOLGA3Q08378 1498 aa42.12■■■■■ 4.33
NPC2-207ENST00000555619 UBTFP17480 764 aaKnown RBP42.11■■■■■ 4.33
NPC2-207ENST00000555619 GRIN2AQ12879 1464 aa42.09■■■■■ 4.33
NPC2-207ENST00000555619 CHD1O14646 1710 aa41.91■■■■■ 4.3
NPC2-207ENST00000555619 NUP160Q12769 1436 aa41.86■■■■■ 4.29
NPC2-207ENST00000555619 TNIKQ9UKE5 1360 aa41.84■■■■■ 4.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms