Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC24.6■■□□□ 1.53
PCDHGB6Q9Y5F9 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
PCDHGB6Q9Y5F9 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
PCDHGB6Q9Y5F9 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC24.6■■□□□ 1.53
PCDHGB6Q9Y5F9 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC24.59■■□□□ 1.53
PCDHGB6Q9Y5F9 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC24.59■■□□□ 1.53
PCDHGB6Q9Y5F9 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
PCDHGB6Q9Y5F9 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
PCDHGB6Q9Y5F9 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC24.58■■□□□ 1.53
PCDHGB6Q9Y5F9 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
PCDHGB6Q9Y5F9 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC24.57■■□□□ 1.52
PCDHGB6Q9Y5F9 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
PCDHGB6Q9Y5F9 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
PCDHGB6Q9Y5F9 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
PCDHGB6Q9Y5F9 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
PCDHGB6Q9Y5F9 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC24.55■■□□□ 1.52
PCDHGB6Q9Y5F9 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC24.54■■□□□ 1.52
PCDHGB6Q9Y5F9 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
PCDHGB6Q9Y5F9 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
PCDHGB6Q9Y5F9 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC24.54■■□□□ 1.52
PCDHGB6Q9Y5F9 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC24.53■■□□□ 1.52
PCDHGB6Q9Y5F9 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
PCDHGB6Q9Y5F9 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC24.52■■□□□ 1.52
PCDHGB6Q9Y5F9 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC24.52■■□□□ 1.52
PCDHGB6Q9Y5F9 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC24.52■■□□□ 1.52
PCDHGB6Q9Y5F9 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
PCDHGB6Q9Y5F9 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC24.52■■□□□ 1.52
PCDHGB6Q9Y5F9 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
PCDHGB6Q9Y5F9 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
PCDHGB6Q9Y5F9 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
PCDHGB6Q9Y5F9 ZNRF2P2-203ENST00000454624 420 ntBASIC24.5■■□□□ 1.51
PCDHGB6Q9Y5F9 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC24.5■■□□□ 1.51
PCDHGB6Q9Y5F9 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC24.49■■□□□ 1.51
PCDHGB6Q9Y5F9 HGH1-207ENST00000628266 258 ntTSL 5 BASIC24.49■■□□□ 1.51
PCDHGB6Q9Y5F9 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
PCDHGB6Q9Y5F9 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
PCDHGB6Q9Y5F9 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC24.48■■□□□ 1.51
PCDHGB6Q9Y5F9 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PCDHGB6Q9Y5F9 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC24.47■■□□□ 1.51
PCDHGB6Q9Y5F9 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
PCDHGB6Q9Y5F9 DUX4L29-201ENST00000425409 679 ntBASIC24.47■■□□□ 1.51
PCDHGB6Q9Y5F9 AC108673.1-201ENST00000510422 1159 ntBASIC24.47■■□□□ 1.51
PCDHGB6Q9Y5F9 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PCDHGB6Q9Y5F9 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
PCDHGB6Q9Y5F9 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
PCDHGB6Q9Y5F9 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
PCDHGB6Q9Y5F9 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC24.45■■□□□ 1.5
PCDHGB6Q9Y5F9 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC24.45■■□□□ 1.5
PCDHGB6Q9Y5F9 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
PCDHGB6Q9Y5F9 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC24.45■■□□□ 1.5
PCDHGB6Q9Y5F9 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
PCDHGB6Q9Y5F9 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
PCDHGB6Q9Y5F9 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PCDHGB6Q9Y5F9 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
PCDHGB6Q9Y5F9 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
PCDHGB6Q9Y5F9 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PCDHGB6Q9Y5F9 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
PCDHGB6Q9Y5F9 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
PCDHGB6Q9Y5F9 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC24.42■■□□□ 1.5
PCDHGB6Q9Y5F9 PVT1-219ENST00000523427 938 ntTSL 3 BASIC24.42■■□□□ 1.5
PCDHGB6Q9Y5F9 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC24.42■■□□□ 1.5
PCDHGB6Q9Y5F9 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
PCDHGB6Q9Y5F9 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
PCDHGB6Q9Y5F9 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PCDHGB6Q9Y5F9 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
PCDHGB6Q9Y5F9 CIB2-204ENST00000557846 934 ntTSL 3 BASIC24.39■■□□□ 1.49
PCDHGB6Q9Y5F9 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC24.39■■□□□ 1.49
PCDHGB6Q9Y5F9 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
PCDHGB6Q9Y5F9 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
PCDHGB6Q9Y5F9 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PCDHGB6Q9Y5F9 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC24.38■■□□□ 1.49
PCDHGB6Q9Y5F9 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC24.37■■□□□ 1.49
PCDHGB6Q9Y5F9 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC24.37■■□□□ 1.49
PCDHGB6Q9Y5F9 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PCDHGB6Q9Y5F9 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
PCDHGB6Q9Y5F9 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PCDHGB6Q9Y5F9 AC021231.2-201ENST00000594613 730 ntBASIC24.36■■□□□ 1.49
PCDHGB6Q9Y5F9 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
PCDHGB6Q9Y5F9 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
PCDHGB6Q9Y5F9 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
PCDHGB6Q9Y5F9 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
PCDHGB6Q9Y5F9 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PCDHGB6Q9Y5F9 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PCDHGB6Q9Y5F9 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
PCDHGB6Q9Y5F9 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PCDHGB6Q9Y5F9 MIR6090-201ENST00000622481 60 ntBASIC24.34■■□□□ 1.49
PCDHGB6Q9Y5F9 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
PCDHGB6Q9Y5F9 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PCDHGB6Q9Y5F9 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PCDHGB6Q9Y5F9 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC24.32■■□□□ 1.48
PCDHGB6Q9Y5F9 HLA-V-202ENST00000446817 847 ntBASIC24.32■■□□□ 1.48
PCDHGB6Q9Y5F9 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
PCDHGB6Q9Y5F9 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
PCDHGB6Q9Y5F9 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
PCDHGB6Q9Y5F9 MBP-237ENST00000579129 1052 ntTSL 5 BASIC24.3■■□□□ 1.48
PCDHGB6Q9Y5F9 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PCDHGB6Q9Y5F9 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC24.29■■□□□ 1.48
PCDHGB6Q9Y5F9 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PCDHGB6Q9Y5F9 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC24.29■■□□□ 1.48
PCDHGB6Q9Y5F9 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms