Protein–RNA interactions for Protein: Q99878

HIST1H2AJ, Histone H2A type 1-J, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2AJQ99878 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.7
HIST1H2AJQ99878 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
HIST1H2AJQ99878 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
HIST1H2AJQ99878 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
HIST1H2AJQ99878 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC25.68■■□□□ 1.7
HIST1H2AJQ99878 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
HIST1H2AJQ99878 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC25.68■■□□□ 1.7
HIST1H2AJQ99878 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC25.68■■□□□ 1.7
HIST1H2AJQ99878 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
HIST1H2AJQ99878 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
HIST1H2AJQ99878 ABCB10P3-201ENST00000561950 2166 ntBASIC25.67■■□□□ 1.7
HIST1H2AJQ99878 HNRNPLP2-201ENST00000568980 1570 ntBASIC25.66■■□□□ 1.7
HIST1H2AJQ99878 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC25.66■■□□□ 1.7
HIST1H2AJQ99878 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
HIST1H2AJQ99878 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
HIST1H2AJQ99878 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC25.65■■□□□ 1.7
HIST1H2AJQ99878 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
HIST1H2AJQ99878 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
HIST1H2AJQ99878 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
HIST1H2AJQ99878 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
HIST1H2AJQ99878 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC25.63■■□□□ 1.69
HIST1H2AJQ99878 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC25.63■■□□□ 1.69
HIST1H2AJQ99878 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC25.63■■□□□ 1.69
HIST1H2AJQ99878 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC25.63■■□□□ 1.69
HIST1H2AJQ99878 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
HIST1H2AJQ99878 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
HIST1H2AJQ99878 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
HIST1H2AJQ99878 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
HIST1H2AJQ99878 RPS2-209ENST00000529806 993 ntTSL 3 BASIC25.61■■□□□ 1.69
HIST1H2AJQ99878 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
HIST1H2AJQ99878 AC005559.1-201ENST00000589661 871 ntBASIC25.61■■□□□ 1.69
HIST1H2AJQ99878 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC25.6■■□□□ 1.69
HIST1H2AJQ99878 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC25.6■■□□□ 1.69
HIST1H2AJQ99878 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
HIST1H2AJQ99878 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
HIST1H2AJQ99878 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC25.59■■□□□ 1.69
HIST1H2AJQ99878 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC25.59■■□□□ 1.69
HIST1H2AJQ99878 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
HIST1H2AJQ99878 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC25.58■■□□□ 1.69
HIST1H2AJQ99878 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
HIST1H2AJQ99878 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC25.58■■□□□ 1.69
HIST1H2AJQ99878 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
HIST1H2AJQ99878 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
HIST1H2AJQ99878 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC25.57■■□□□ 1.68
HIST1H2AJQ99878 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
HIST1H2AJQ99878 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
HIST1H2AJQ99878 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
HIST1H2AJQ99878 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
HIST1H2AJQ99878 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
HIST1H2AJQ99878 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
HIST1H2AJQ99878 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
HIST1H2AJQ99878 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC25.55■■□□□ 1.68
HIST1H2AJQ99878 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
HIST1H2AJQ99878 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC25.54■■□□□ 1.68
HIST1H2AJQ99878 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC25.53■■□□□ 1.68
HIST1H2AJQ99878 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
HIST1H2AJQ99878 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
HIST1H2AJQ99878 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC25.52■■□□□ 1.68
HIST1H2AJQ99878 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC25.52■■□□□ 1.68
HIST1H2AJQ99878 AC139426.1-201ENST00000568218 2529 ntBASIC25.52■■□□□ 1.68
HIST1H2AJQ99878 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
HIST1H2AJQ99878 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC25.51■■□□□ 1.67
HIST1H2AJQ99878 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
HIST1H2AJQ99878 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
HIST1H2AJQ99878 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC25.51■■□□□ 1.67
HIST1H2AJQ99878 MIR3665-201ENST00000578708 105 ntBASIC25.51■■□□□ 1.67
HIST1H2AJQ99878 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC25.5■■□□□ 1.67
HIST1H2AJQ99878 AP006261.1-201ENST00000584783 668 ntBASIC25.5■■□□□ 1.67
HIST1H2AJQ99878 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
HIST1H2AJQ99878 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
HIST1H2AJQ99878 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
HIST1H2AJQ99878 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
HIST1H2AJQ99878 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC25.49■■□□□ 1.67
HIST1H2AJQ99878 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
HIST1H2AJQ99878 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC25.48■■□□□ 1.67
HIST1H2AJQ99878 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC25.48■■□□□ 1.67
HIST1H2AJQ99878 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
HIST1H2AJQ99878 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
HIST1H2AJQ99878 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC25.47■■□□□ 1.67
HIST1H2AJQ99878 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC25.47■■□□□ 1.67
HIST1H2AJQ99878 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC25.47■■□□□ 1.67
HIST1H2AJQ99878 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC25.47■■□□□ 1.67
HIST1H2AJQ99878 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
HIST1H2AJQ99878 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC25.46■■□□□ 1.67
HIST1H2AJQ99878 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC25.46■■□□□ 1.67
HIST1H2AJQ99878 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC25.45■■□□□ 1.66
HIST1H2AJQ99878 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC25.45■■□□□ 1.66
HIST1H2AJQ99878 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC25.45■■□□□ 1.66
HIST1H2AJQ99878 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
HIST1H2AJQ99878 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
HIST1H2AJQ99878 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
HIST1H2AJQ99878 DUX4L28-201ENST00000623687 678 ntBASIC25.44■■□□□ 1.66
HIST1H2AJQ99878 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC25.44■■□□□ 1.66
HIST1H2AJQ99878 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC25.44■■□□□ 1.66
HIST1H2AJQ99878 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
HIST1H2AJQ99878 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC25.44■■□□□ 1.66
HIST1H2AJQ99878 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
HIST1H2AJQ99878 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC25.41■■□□□ 1.66
HIST1H2AJQ99878 AL139393.2-201ENST00000608721 2025 ntBASIC25.41■■□□□ 1.66
HIST1H2AJQ99878 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms