Protein–RNA interactions for Protein: P16298

PPP3CB, Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CBP16298 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PPP3CBP16298 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
PPP3CBP16298 DUX4L29-201ENST00000425409 679 ntBASIC23.33■■□□□ 1.33
PPP3CBP16298 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
PPP3CBP16298 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC23.33■■□□□ 1.32
PPP3CBP16298 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC23.32■■□□□ 1.32
PPP3CBP16298 ABCB10P3-201ENST00000561950 2166 ntBASIC23.32■■□□□ 1.32
PPP3CBP16298 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PPP3CBP16298 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC23.31■■□□□ 1.32
PPP3CBP16298 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
PPP3CBP16298 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
PPP3CBP16298 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PPP3CBP16298 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC23.3■■□□□ 1.32
PPP3CBP16298 CIB2-204ENST00000557846 934 ntTSL 3 BASIC23.3■■□□□ 1.32
PPP3CBP16298 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PPP3CBP16298 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
PPP3CBP16298 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
PPP3CBP16298 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PPP3CBP16298 SHF-206ENST00000560471 2499 ntTSL 5 BASIC23.3■■□□□ 1.32
PPP3CBP16298 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PPP3CBP16298 ZNRF2P2-203ENST00000454624 420 ntBASIC23.29■■□□□ 1.32
PPP3CBP16298 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
PPP3CBP16298 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC23.29■■□□□ 1.32
PPP3CBP16298 HGH1-207ENST00000628266 258 ntTSL 5 BASIC23.29■■□□□ 1.32
PPP3CBP16298 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
PPP3CBP16298 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
PPP3CBP16298 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
PPP3CBP16298 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PPP3CBP16298 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC23.28■■□□□ 1.32
PPP3CBP16298 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC23.28■■□□□ 1.32
PPP3CBP16298 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC23.28■■□□□ 1.32
PPP3CBP16298 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC23.28■■□□□ 1.32
PPP3CBP16298 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PPP3CBP16298 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC23.27■■□□□ 1.32
PPP3CBP16298 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PPP3CBP16298 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PPP3CBP16298 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PPP3CBP16298 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PPP3CBP16298 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
PPP3CBP16298 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
PPP3CBP16298 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
PPP3CBP16298 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
PPP3CBP16298 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC23.23■■□□□ 1.31
PPP3CBP16298 PVT1-219ENST00000523427 938 ntTSL 3 BASIC23.23■■□□□ 1.31
PPP3CBP16298 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
PPP3CBP16298 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
PPP3CBP16298 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
PPP3CBP16298 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC23.22■■□□□ 1.31
PPP3CBP16298 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
PPP3CBP16298 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
PPP3CBP16298 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PPP3CBP16298 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PPP3CBP16298 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PPP3CBP16298 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC23.19■■□□□ 1.3
PPP3CBP16298 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC23.19■■□□□ 1.3
PPP3CBP16298 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PPP3CBP16298 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PPP3CBP16298 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC23.19■■□□□ 1.3
PPP3CBP16298 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PPP3CBP16298 AC021231.2-201ENST00000594613 730 ntBASIC23.19■■□□□ 1.3
PPP3CBP16298 MIR6090-201ENST00000622481 60 ntBASIC23.19■■□□□ 1.3
PPP3CBP16298 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
PPP3CBP16298 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PPP3CBP16298 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PPP3CBP16298 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PPP3CBP16298 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
PPP3CBP16298 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PPP3CBP16298 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PPP3CBP16298 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PPP3CBP16298 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PPP3CBP16298 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PPP3CBP16298 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PPP3CBP16298 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.3
PPP3CBP16298 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
PPP3CBP16298 HLA-V-202ENST00000446817 847 ntBASIC23.13■■□□□ 1.29
PPP3CBP16298 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC23.12■■□□□ 1.29
PPP3CBP16298 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PPP3CBP16298 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
PPP3CBP16298 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
PPP3CBP16298 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
PPP3CBP16298 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PPP3CBP16298 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PPP3CBP16298 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PPP3CBP16298 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC23.09■■□□□ 1.29
PPP3CBP16298 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PPP3CBP16298 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PPP3CBP16298 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
PPP3CBP16298 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC23.08■■□□□ 1.29
PPP3CBP16298 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
PPP3CBP16298 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
PPP3CBP16298 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
PPP3CBP16298 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC23.07■■□□□ 1.28
PPP3CBP16298 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PPP3CBP16298 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC23.07■■□□□ 1.28
PPP3CBP16298 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC23.07■■□□□ 1.28
PPP3CBP16298 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PPP3CBP16298 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC23.07■■□□□ 1.28
PPP3CBP16298 MBP-237ENST00000579129 1052 ntTSL 5 BASIC23.07■■□□□ 1.28
PPP3CBP16298 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
PPP3CBP16298 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC23.06■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms