Protein–RNA interactions for Protein: Q9Y5H7

PCDHA5, Protocadherin alpha-5, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA5Q9Y5H7 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
PCDHA5Q9Y5H7 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC29.94■■■□□ 2.38
PCDHA5Q9Y5H7 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
PCDHA5Q9Y5H7 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
PCDHA5Q9Y5H7 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC29.92■■■□□ 2.38
PCDHA5Q9Y5H7 AL135925.1-201ENST00000605920 1701 ntBASIC29.91■■■□□ 2.38
PCDHA5Q9Y5H7 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC29.91■■■□□ 2.38
PCDHA5Q9Y5H7 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
PCDHA5Q9Y5H7 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
PCDHA5Q9Y5H7 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
PCDHA5Q9Y5H7 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
PCDHA5Q9Y5H7 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC29.89■■■□□ 2.38
PCDHA5Q9Y5H7 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC29.89■■■□□ 2.38
PCDHA5Q9Y5H7 KLF16-203ENST00000592313 508 ntTSL 3 BASIC29.89■■■□□ 2.38
PCDHA5Q9Y5H7 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.37
PCDHA5Q9Y5H7 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC29.88■■■□□ 2.37
PCDHA5Q9Y5H7 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
PCDHA5Q9Y5H7 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
PCDHA5Q9Y5H7 WASH5P-204ENST00000632292 975 ntBASIC29.86■■■□□ 2.37
PCDHA5Q9Y5H7 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC29.86■■■□□ 2.37
PCDHA5Q9Y5H7 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC29.86■■■□□ 2.37
PCDHA5Q9Y5H7 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC29.85■■■□□ 2.37
PCDHA5Q9Y5H7 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC29.85■■■□□ 2.37
PCDHA5Q9Y5H7 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC29.85■■■□□ 2.37
PCDHA5Q9Y5H7 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC29.85■■■□□ 2.37
PCDHA5Q9Y5H7 AL133380.1-201ENST00000506013 324 ntBASIC29.84■■■□□ 2.37
PCDHA5Q9Y5H7 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC29.82■■■□□ 2.36
PCDHA5Q9Y5H7 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC29.81■■■□□ 2.36
PCDHA5Q9Y5H7 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC29.81■■■□□ 2.36
PCDHA5Q9Y5H7 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC29.8■■■□□ 2.36
PCDHA5Q9Y5H7 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC29.8■■■□□ 2.36
PCDHA5Q9Y5H7 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC29.8■■■□□ 2.36
PCDHA5Q9Y5H7 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC29.8■■■□□ 2.36
PCDHA5Q9Y5H7 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC29.79■■■□□ 2.36
PCDHA5Q9Y5H7 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC29.78■■■□□ 2.36
PCDHA5Q9Y5H7 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
PCDHA5Q9Y5H7 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC29.77■■■□□ 2.36
PCDHA5Q9Y5H7 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC29.76■■■□□ 2.36
PCDHA5Q9Y5H7 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
PCDHA5Q9Y5H7 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
PCDHA5Q9Y5H7 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC29.73■■■□□ 2.35
PCDHA5Q9Y5H7 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
PCDHA5Q9Y5H7 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC29.7■■■□□ 2.35
PCDHA5Q9Y5H7 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC29.7■■■□□ 2.34
PCDHA5Q9Y5H7 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC29.69■■■□□ 2.34
PCDHA5Q9Y5H7 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC29.68■■■□□ 2.34
PCDHA5Q9Y5H7 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC29.68■■■□□ 2.34
PCDHA5Q9Y5H7 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
PCDHA5Q9Y5H7 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
PCDHA5Q9Y5H7 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC29.66■■■□□ 2.34
PCDHA5Q9Y5H7 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC29.66■■■□□ 2.34
PCDHA5Q9Y5H7 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
PCDHA5Q9Y5H7 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC29.65■■■□□ 2.34
PCDHA5Q9Y5H7 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
PCDHA5Q9Y5H7 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
PCDHA5Q9Y5H7 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
PCDHA5Q9Y5H7 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
PCDHA5Q9Y5H7 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
PCDHA5Q9Y5H7 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC29.62■■■□□ 2.33
PCDHA5Q9Y5H7 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
PCDHA5Q9Y5H7 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC29.58■■■□□ 2.33
PCDHA5Q9Y5H7 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
PCDHA5Q9Y5H7 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC29.57■■■□□ 2.32
PCDHA5Q9Y5H7 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
PCDHA5Q9Y5H7 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
PCDHA5Q9Y5H7 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
PCDHA5Q9Y5H7 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
PCDHA5Q9Y5H7 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
PCDHA5Q9Y5H7 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
PCDHA5Q9Y5H7 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC29.55■■■□□ 2.32
PCDHA5Q9Y5H7 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
PCDHA5Q9Y5H7 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
PCDHA5Q9Y5H7 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC29.53■■■□□ 2.32
PCDHA5Q9Y5H7 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
PCDHA5Q9Y5H7 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
PCDHA5Q9Y5H7 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC29.53■■■□□ 2.32
PCDHA5Q9Y5H7 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC29.53■■■□□ 2.32
PCDHA5Q9Y5H7 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
PCDHA5Q9Y5H7 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
PCDHA5Q9Y5H7 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
PCDHA5Q9Y5H7 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC29.51■■■□□ 2.31
PCDHA5Q9Y5H7 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC29.51■■■□□ 2.31
PCDHA5Q9Y5H7 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
PCDHA5Q9Y5H7 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC29.49■■■□□ 2.31
PCDHA5Q9Y5H7 RARRES2P7-201ENST00000567349 469 ntBASIC29.49■■■□□ 2.31
PCDHA5Q9Y5H7 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC29.48■■■□□ 2.31
PCDHA5Q9Y5H7 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
PCDHA5Q9Y5H7 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC29.48■■■□□ 2.31
PCDHA5Q9Y5H7 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC29.48■■■□□ 2.31
PCDHA5Q9Y5H7 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC29.48■■■□□ 2.31
PCDHA5Q9Y5H7 AL139393.2-201ENST00000608721 2025 ntBASIC29.47■■■□□ 2.31
PCDHA5Q9Y5H7 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
PCDHA5Q9Y5H7 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
PCDHA5Q9Y5H7 SETD8P1-201ENST00000623146 1180 ntBASIC29.46■■■□□ 2.31
PCDHA5Q9Y5H7 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
PCDHA5Q9Y5H7 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
PCDHA5Q9Y5H7 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
PCDHA5Q9Y5H7 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
PCDHA5Q9Y5H7 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
PCDHA5Q9Y5H7 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
Retrieved 100 of 98,524 protein–RNA pairs in 9.5 ms