Protein–RNA interactions for Protein: P49747

COMP, Cartilage oligomeric matrix protein, humanhuman

Predicted RBP Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMPP49747 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
COMPP49747 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
COMPP49747 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC21.93■■□□□ 1.1
COMPP49747 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
COMPP49747 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
COMPP49747 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
COMPP49747 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC21.92■■□□□ 1.1
COMPP49747 AC120057.4-201ENST00000624722 1615 ntBASIC21.92■■□□□ 1.1
COMPP49747 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
COMPP49747 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
COMPP49747 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC21.91■■□□□ 1.1
COMPP49747 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
COMPP49747 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC21.9■■□□□ 1.1
COMPP49747 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
COMPP49747 BOD1-206ENST00000480951 814 ntTSL 2 BASIC21.9■■□□□ 1.1
COMPP49747 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC21.89■■□□□ 1.09
COMPP49747 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
COMPP49747 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC21.88■■□□□ 1.09
COMPP49747 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
COMPP49747 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
COMPP49747 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC21.87■■□□□ 1.09
COMPP49747 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC21.87■■□□□ 1.09
COMPP49747 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
COMPP49747 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
COMPP49747 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
COMPP49747 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
COMPP49747 DENR-202ENST00000455982 1052 ntTSL 5 BASIC21.82■■□□□ 1.08
COMPP49747 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC21.82■■□□□ 1.08
COMPP49747 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
COMPP49747 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC21.81■■□□□ 1.08
COMPP49747 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
COMPP49747 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
COMPP49747 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
COMPP49747 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
COMPP49747 HGH1-207ENST00000628266 258 ntTSL 5 BASIC21.79■■□□□ 1.08
COMPP49747 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
COMPP49747 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
COMPP49747 MIR4449-201ENST00000578365 66 ntBASIC21.78■■□□□ 1.08
COMPP49747 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
COMPP49747 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
COMPP49747 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
COMPP49747 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC21.77■■□□□ 1.08
COMPP49747 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
COMPP49747 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
COMPP49747 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC21.76■■□□□ 1.07
COMPP49747 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
COMPP49747 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
COMPP49747 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
COMPP49747 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
COMPP49747 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
COMPP49747 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
COMPP49747 AL161658.1-201ENST00000623641 1967 ntBASIC21.74■■□□□ 1.07
COMPP49747 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
COMPP49747 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
COMPP49747 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COMPP49747 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC21.71■■□□□ 1.07
COMPP49747 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
COMPP49747 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
COMPP49747 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
COMPP49747 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
COMPP49747 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
COMPP49747 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
COMPP49747 MIR639-201ENST00000384974 98 ntBASIC21.69■■□□□ 1.06
COMPP49747 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
COMPP49747 RPS2-202ENST00000526522 924 ntTSL 2 BASIC21.69■■□□□ 1.06
COMPP49747 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
COMPP49747 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
COMPP49747 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
COMPP49747 MACF1-219ENST00000484793 834 ntTSL 2 BASIC21.68■■□□□ 1.06
COMPP49747 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC21.67■■□□□ 1.06
COMPP49747 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
COMPP49747 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
COMPP49747 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC21.66■■□□□ 1.06
COMPP49747 DUX4L29-201ENST00000425409 679 ntBASIC21.66■■□□□ 1.06
COMPP49747 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
COMPP49747 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
COMPP49747 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
COMPP49747 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
COMPP49747 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
COMPP49747 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC21.63■■□□□ 1.05
COMPP49747 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
COMPP49747 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
COMPP49747 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
COMPP49747 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
COMPP49747 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC21.62■■□□□ 1.05
COMPP49747 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC21.62■■□□□ 1.05
COMPP49747 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC21.61■■□□□ 1.05
COMPP49747 RPS2-209ENST00000529806 993 ntTSL 3 BASIC21.61■■□□□ 1.05
COMPP49747 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC21.6■■□□□ 1.05
COMPP49747 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
COMPP49747 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COMPP49747 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
COMPP49747 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
COMPP49747 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
COMPP49747 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
COMPP49747 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC21.57■■□□□ 1.04
COMPP49747 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
COMPP49747 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
COMPP49747 CALM3-209ENST00000597743 577 ntTSL 4 BASIC21.56■■□□□ 1.04
COMPP49747 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 9.2 ms