Protein–RNA interactions for Protein: O96008

TOMM40, Mitochondrial import receptor subunit TOM40 homolog, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40O96008 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC20.76■□□□□ 0.91
TOMM40O96008 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TOMM40O96008 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TOMM40O96008 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TOMM40O96008 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TOMM40O96008 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TOMM40O96008 ST7-AS1-201ENST00000456775 1889 ntBASIC20.74■□□□□ 0.91
TOMM40O96008 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TOMM40O96008 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TOMM40O96008 SHF-206ENST00000560471 2499 ntTSL 5 BASIC20.72■□□□□ 0.91
TOMM40O96008 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TOMM40O96008 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC20.72■□□□□ 0.91
TOMM40O96008 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TOMM40O96008 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TOMM40O96008 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
TOMM40O96008 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC20.7■□□□□ 0.9
TOMM40O96008 KLF16-203ENST00000592313 508 ntTSL 3 BASIC20.7■□□□□ 0.9
TOMM40O96008 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TOMM40O96008 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TOMM40O96008 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TOMM40O96008 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TOMM40O96008 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
TOMM40O96008 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC20.68■□□□□ 0.9
TOMM40O96008 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TOMM40O96008 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TOMM40O96008 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TOMM40O96008 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
TOMM40O96008 WASH5P-204ENST00000632292 975 ntBASIC20.66■□□□□ 0.9
TOMM40O96008 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TOMM40O96008 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TOMM40O96008 AL135925.1-201ENST00000605920 1701 ntBASIC20.65■□□□□ 0.9
TOMM40O96008 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC20.65■□□□□ 0.9
TOMM40O96008 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
TOMM40O96008 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TOMM40O96008 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TOMM40O96008 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC20.63■□□□□ 0.89
TOMM40O96008 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TOMM40O96008 AL133380.1-201ENST00000506013 324 ntBASIC20.62■□□□□ 0.89
TOMM40O96008 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TOMM40O96008 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
TOMM40O96008 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TOMM40O96008 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC20.6■□□□□ 0.89
TOMM40O96008 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
TOMM40O96008 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC20.59■□□□□ 0.89
TOMM40O96008 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TOMM40O96008 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC20.58■□□□□ 0.89
TOMM40O96008 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
TOMM40O96008 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TOMM40O96008 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
TOMM40O96008 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TOMM40O96008 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TOMM40O96008 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TOMM40O96008 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
TOMM40O96008 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
TOMM40O96008 AC135731.1-201ENST00000569415 2548 ntBASIC20.55■□□□□ 0.88
TOMM40O96008 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TOMM40O96008 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
TOMM40O96008 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC20.55■□□□□ 0.88
TOMM40O96008 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TOMM40O96008 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
TOMM40O96008 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TOMM40O96008 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TOMM40O96008 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TOMM40O96008 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TOMM40O96008 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TOMM40O96008 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
TOMM40O96008 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC20.52■□□□□ 0.88
TOMM40O96008 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
TOMM40O96008 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC20.5■□□□□ 0.87
TOMM40O96008 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TOMM40O96008 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TOMM40O96008 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TOMM40O96008 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TOMM40O96008 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TOMM40O96008 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TOMM40O96008 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC20.48■□□□□ 0.87
TOMM40O96008 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TOMM40O96008 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TOMM40O96008 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TOMM40O96008 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC20.47■□□□□ 0.87
TOMM40O96008 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TOMM40O96008 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
TOMM40O96008 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TOMM40O96008 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TOMM40O96008 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TOMM40O96008 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TOMM40O96008 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
TOMM40O96008 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC20.44■□□□□ 0.86
TOMM40O96008 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TOMM40O96008 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TOMM40O96008 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
TOMM40O96008 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TOMM40O96008 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TOMM40O96008 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC20.43■□□□□ 0.86
TOMM40O96008 RARRES2P7-201ENST00000567349 469 ntBASIC20.43■□□□□ 0.86
TOMM40O96008 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TOMM40O96008 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
TOMM40O96008 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TOMM40O96008 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TOMM40O96008 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms