Protein–RNA interactions for Protein: Q99848

EBNA1BP2, Probable rRNA-processing protein EBP2, humanhuman

Known RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBNA1BP2Q99848 ABCB10P1-201ENST00000614297 2181 ntBASIC27.52■■■□□ 2
EBNA1BP2Q99848 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC27.51■■□□□ 1.99
EBNA1BP2Q99848 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC27.49■■□□□ 1.99
EBNA1BP2Q99848 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
EBNA1BP2Q99848 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC27.48■■□□□ 1.99
EBNA1BP2Q99848 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC27.48■■□□□ 1.99
EBNA1BP2Q99848 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC27.47■■□□□ 1.99
EBNA1BP2Q99848 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC27.47■■□□□ 1.99
EBNA1BP2Q99848 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
EBNA1BP2Q99848 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC27.42■■□□□ 1.98
EBNA1BP2Q99848 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC27.4■■□□□ 1.98
EBNA1BP2Q99848 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
EBNA1BP2Q99848 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC27.38■■□□□ 1.97
EBNA1BP2Q99848 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
EBNA1BP2Q99848 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
EBNA1BP2Q99848 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
EBNA1BP2Q99848 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC27.37■■□□□ 1.97
EBNA1BP2Q99848 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC27.37■■□□□ 1.97
EBNA1BP2Q99848 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC27.37■■□□□ 1.97
EBNA1BP2Q99848 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC27.36■■□□□ 1.97
EBNA1BP2Q99848 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC27.35■■□□□ 1.97
EBNA1BP2Q99848 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
EBNA1BP2Q99848 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
EBNA1BP2Q99848 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC27.32■■□□□ 1.96
EBNA1BP2Q99848 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
EBNA1BP2Q99848 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC27.31■■□□□ 1.96
EBNA1BP2Q99848 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC27.31■■□□□ 1.96
EBNA1BP2Q99848 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC27.3■■□□□ 1.96
EBNA1BP2Q99848 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC27.29■■□□□ 1.96
EBNA1BP2Q99848 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC27.28■■□□□ 1.96
EBNA1BP2Q99848 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC27.28■■□□□ 1.96
EBNA1BP2Q99848 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
EBNA1BP2Q99848 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC27.28■■□□□ 1.96
EBNA1BP2Q99848 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
EBNA1BP2Q99848 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
EBNA1BP2Q99848 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC27.27■■□□□ 1.96
EBNA1BP2Q99848 AL161658.1-201ENST00000623641 1967 ntBASIC27.27■■□□□ 1.96
EBNA1BP2Q99848 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC27.27■■□□□ 1.96
EBNA1BP2Q99848 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
EBNA1BP2Q99848 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
EBNA1BP2Q99848 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
EBNA1BP2Q99848 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC27.26■■□□□ 1.95
EBNA1BP2Q99848 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
EBNA1BP2Q99848 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC27.25■■□□□ 1.95
EBNA1BP2Q99848 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
EBNA1BP2Q99848 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
EBNA1BP2Q99848 ABCB10P3-201ENST00000561950 2166 ntBASIC27.24■■□□□ 1.95
EBNA1BP2Q99848 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC27.24■■□□□ 1.95
EBNA1BP2Q99848 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC27.24■■□□□ 1.95
EBNA1BP2Q99848 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
EBNA1BP2Q99848 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
EBNA1BP2Q99848 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
EBNA1BP2Q99848 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC27.22■■□□□ 1.95
EBNA1BP2Q99848 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
EBNA1BP2Q99848 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC27.22■■□□□ 1.95
EBNA1BP2Q99848 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
EBNA1BP2Q99848 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
EBNA1BP2Q99848 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC27.2■■□□□ 1.94
EBNA1BP2Q99848 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
EBNA1BP2Q99848 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
EBNA1BP2Q99848 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
EBNA1BP2Q99848 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC27.18■■□□□ 1.94
EBNA1BP2Q99848 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
EBNA1BP2Q99848 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
EBNA1BP2Q99848 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC27.17■■□□□ 1.94
EBNA1BP2Q99848 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC27.17■■□□□ 1.94
EBNA1BP2Q99848 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
EBNA1BP2Q99848 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC27.17■■□□□ 1.94
EBNA1BP2Q99848 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC27.17■■□□□ 1.94
EBNA1BP2Q99848 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC27.16■■□□□ 1.94
EBNA1BP2Q99848 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
EBNA1BP2Q99848 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC27.16■■□□□ 1.94
EBNA1BP2Q99848 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC27.16■■□□□ 1.94
EBNA1BP2Q99848 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
EBNA1BP2Q99848 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC27.15■■□□□ 1.94
EBNA1BP2Q99848 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC27.15■■□□□ 1.94
EBNA1BP2Q99848 ST7-AS1-201ENST00000456775 1889 ntBASIC27.15■■□□□ 1.94
EBNA1BP2Q99848 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC27.14■■□□□ 1.93
EBNA1BP2Q99848 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
EBNA1BP2Q99848 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
EBNA1BP2Q99848 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
EBNA1BP2Q99848 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC27.11■■□□□ 1.93
EBNA1BP2Q99848 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
EBNA1BP2Q99848 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
EBNA1BP2Q99848 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
EBNA1BP2Q99848 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
EBNA1BP2Q99848 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
EBNA1BP2Q99848 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC27.08■■□□□ 1.93
EBNA1BP2Q99848 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC27.08■■□□□ 1.93
EBNA1BP2Q99848 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
EBNA1BP2Q99848 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
EBNA1BP2Q99848 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
EBNA1BP2Q99848 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
EBNA1BP2Q99848 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC27.06■■□□□ 1.92
EBNA1BP2Q99848 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC27.04■■□□□ 1.92
EBNA1BP2Q99848 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
EBNA1BP2Q99848 AC139426.1-201ENST00000568218 2529 ntBASIC27.03■■□□□ 1.92
EBNA1BP2Q99848 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
EBNA1BP2Q99848 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC27.01■■□□□ 1.91
EBNA1BP2Q99848 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms