Protein–RNA interactions for Protein: Q8TDX6

CSGALNACT1, Chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1Q8TDX6 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC28.22■■■□□ 2.11
CSGALNACT1Q8TDX6 BOD1-206ENST00000480951 814 ntTSL 2 BASIC28.22■■■□□ 2.11
CSGALNACT1Q8TDX6 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC28.21■■■□□ 2.11
CSGALNACT1Q8TDX6 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC28.21■■■□□ 2.11
CSGALNACT1Q8TDX6 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC28.21■■■□□ 2.11
CSGALNACT1Q8TDX6 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
CSGALNACT1Q8TDX6 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
CSGALNACT1Q8TDX6 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC28.19■■■□□ 2.1
CSGALNACT1Q8TDX6 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC28.18■■■□□ 2.1
CSGALNACT1Q8TDX6 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC28.18■■■□□ 2.1
CSGALNACT1Q8TDX6 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC28.18■■■□□ 2.1
CSGALNACT1Q8TDX6 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC28.18■■■□□ 2.1
CSGALNACT1Q8TDX6 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC28.17■■■□□ 2.1
CSGALNACT1Q8TDX6 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
CSGALNACT1Q8TDX6 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC28.15■■■□□ 2.1
CSGALNACT1Q8TDX6 HLA-V-202ENST00000446817 847 ntBASIC28.14■■■□□ 2.1
CSGALNACT1Q8TDX6 RPS2-209ENST00000529806 993 ntTSL 3 BASIC28.14■■■□□ 2.1
CSGALNACT1Q8TDX6 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
CSGALNACT1Q8TDX6 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
CSGALNACT1Q8TDX6 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC28.12■■■□□ 2.09
CSGALNACT1Q8TDX6 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
CSGALNACT1Q8TDX6 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC28.11■■■□□ 2.09
CSGALNACT1Q8TDX6 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
CSGALNACT1Q8TDX6 MBP-237ENST00000579129 1052 ntTSL 5 BASIC28.1■■■□□ 2.09
CSGALNACT1Q8TDX6 ZNRF2P2-203ENST00000454624 420 ntBASIC28.09■■■□□ 2.09
CSGALNACT1Q8TDX6 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC28.08■■■□□ 2.09
CSGALNACT1Q8TDX6 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
CSGALNACT1Q8TDX6 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC28.08■■■□□ 2.09
CSGALNACT1Q8TDX6 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
CSGALNACT1Q8TDX6 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
CSGALNACT1Q8TDX6 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
CSGALNACT1Q8TDX6 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
CSGALNACT1Q8TDX6 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
CSGALNACT1Q8TDX6 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
CSGALNACT1Q8TDX6 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC28.02■■■□□ 2.08
CSGALNACT1Q8TDX6 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
CSGALNACT1Q8TDX6 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC28.01■■■□□ 2.07
CSGALNACT1Q8TDX6 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
CSGALNACT1Q8TDX6 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
CSGALNACT1Q8TDX6 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
CSGALNACT1Q8TDX6 HGH1-207ENST00000628266 258 ntTSL 5 BASIC27.99■■■□□ 2.07
CSGALNACT1Q8TDX6 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
CSGALNACT1Q8TDX6 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
CSGALNACT1Q8TDX6 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC27.97■■■□□ 2.07
CSGALNACT1Q8TDX6 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
CSGALNACT1Q8TDX6 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC27.95■■■□□ 2.07
CSGALNACT1Q8TDX6 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
CSGALNACT1Q8TDX6 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
CSGALNACT1Q8TDX6 DUX4L29-201ENST00000425409 679 ntBASIC27.95■■■□□ 2.06
CSGALNACT1Q8TDX6 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
CSGALNACT1Q8TDX6 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC27.94■■■□□ 2.06
CSGALNACT1Q8TDX6 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
CSGALNACT1Q8TDX6 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC27.93■■■□□ 2.06
CSGALNACT1Q8TDX6 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC27.93■■■□□ 2.06
CSGALNACT1Q8TDX6 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC27.93■■■□□ 2.06
CSGALNACT1Q8TDX6 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
CSGALNACT1Q8TDX6 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
CSGALNACT1Q8TDX6 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC27.92■■■□□ 2.06
CSGALNACT1Q8TDX6 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
CSGALNACT1Q8TDX6 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
CSGALNACT1Q8TDX6 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
CSGALNACT1Q8TDX6 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC27.9■■■□□ 2.06
CSGALNACT1Q8TDX6 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
CSGALNACT1Q8TDX6 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
CSGALNACT1Q8TDX6 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC27.88■■■□□ 2.05
CSGALNACT1Q8TDX6 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC27.87■■■□□ 2.05
CSGALNACT1Q8TDX6 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
CSGALNACT1Q8TDX6 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC27.87■■■□□ 2.05
CSGALNACT1Q8TDX6 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC27.86■■■□□ 2.05
CSGALNACT1Q8TDX6 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
CSGALNACT1Q8TDX6 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC27.86■■■□□ 2.05
CSGALNACT1Q8TDX6 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
CSGALNACT1Q8TDX6 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
CSGALNACT1Q8TDX6 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC27.85■■■□□ 2.05
CSGALNACT1Q8TDX6 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
CSGALNACT1Q8TDX6 CIB2-204ENST00000557846 934 ntTSL 3 BASIC27.83■■■□□ 2.05
CSGALNACT1Q8TDX6 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC27.83■■■□□ 2.05
CSGALNACT1Q8TDX6 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC27.83■■■□□ 2.05
CSGALNACT1Q8TDX6 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC27.82■■■□□ 2.04
CSGALNACT1Q8TDX6 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
CSGALNACT1Q8TDX6 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
CSGALNACT1Q8TDX6 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
CSGALNACT1Q8TDX6 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC27.79■■■□□ 2.04
CSGALNACT1Q8TDX6 AC021231.2-201ENST00000594613 730 ntBASIC27.78■■■□□ 2.04
CSGALNACT1Q8TDX6 AC108673.1-201ENST00000510422 1159 ntBASIC27.76■■■□□ 2.03
CSGALNACT1Q8TDX6 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
CSGALNACT1Q8TDX6 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC27.75■■■□□ 2.03
CSGALNACT1Q8TDX6 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
CSGALNACT1Q8TDX6 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
CSGALNACT1Q8TDX6 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC27.73■■■□□ 2.03
CSGALNACT1Q8TDX6 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC27.73■■■□□ 2.03
CSGALNACT1Q8TDX6 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC27.72■■■□□ 2.03
CSGALNACT1Q8TDX6 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC27.72■■■□□ 2.03
CSGALNACT1Q8TDX6 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC27.72■■■□□ 2.03
CSGALNACT1Q8TDX6 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC27.71■■■□□ 2.03
CSGALNACT1Q8TDX6 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC27.7■■■□□ 2.03
CSGALNACT1Q8TDX6 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
CSGALNACT1Q8TDX6 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
CSGALNACT1Q8TDX6 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
CSGALNACT1Q8TDX6 RPS2-202ENST00000526522 924 ntTSL 2 BASIC27.68■■■□□ 2.02
Retrieved 100 of 98,524 protein–RNA pairs in 211.5 ms