Protein–RNA interactions for Protein: Q8N5Y2

MSL3, Male-specific lethal 3 homolog, humanhuman

Known RBP Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3Q8N5Y2 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC31.27■■■□□ 2.6
MSL3Q8N5Y2 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC31.27■■■□□ 2.6
MSL3Q8N5Y2 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC31.26■■■□□ 2.59
MSL3Q8N5Y2 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
MSL3Q8N5Y2 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC31.24■■■□□ 2.59
MSL3Q8N5Y2 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC31.24■■■□□ 2.59
MSL3Q8N5Y2 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
MSL3Q8N5Y2 WASH5P-204ENST00000632292 975 ntBASIC31.23■■■□□ 2.59
MSL3Q8N5Y2 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC31.23■■■□□ 2.59
MSL3Q8N5Y2 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
MSL3Q8N5Y2 MIR7108-201ENST00000614319 87 ntBASIC31.21■■■□□ 2.59
MSL3Q8N5Y2 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
MSL3Q8N5Y2 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC31.2■■■□□ 2.59
MSL3Q8N5Y2 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC31.19■■■□□ 2.58
MSL3Q8N5Y2 ST7-205ENST00000393446 2114 ntTSL 5 BASIC31.18■■■□□ 2.58
MSL3Q8N5Y2 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC31.17■■■□□ 2.58
MSL3Q8N5Y2 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
MSL3Q8N5Y2 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
MSL3Q8N5Y2 ST7-202ENST00000323984 2142 ntTSL 5 BASIC31.13■■■□□ 2.57
MSL3Q8N5Y2 ST7-207ENST00000393449 2127 ntTSL 5 BASIC31.13■■■□□ 2.57
MSL3Q8N5Y2 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC31.12■■■□□ 2.57
MSL3Q8N5Y2 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
MSL3Q8N5Y2 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
MSL3Q8N5Y2 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC31.09■■■□□ 2.57
MSL3Q8N5Y2 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
MSL3Q8N5Y2 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC31.07■■■□□ 2.56
MSL3Q8N5Y2 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC31.07■■■□□ 2.56
MSL3Q8N5Y2 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
MSL3Q8N5Y2 BOD1-206ENST00000480951 814 ntTSL 2 BASIC31.06■■■□□ 2.56
MSL3Q8N5Y2 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC31.06■■■□□ 2.56
MSL3Q8N5Y2 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC31.05■■■□□ 2.56
MSL3Q8N5Y2 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC31.05■■■□□ 2.56
MSL3Q8N5Y2 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
MSL3Q8N5Y2 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
MSL3Q8N5Y2 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC31.01■■■□□ 2.56
MSL3Q8N5Y2 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
MSL3Q8N5Y2 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
MSL3Q8N5Y2 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC31■■■□□ 2.55
MSL3Q8N5Y2 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
MSL3Q8N5Y2 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC30.99■■■□□ 2.55
MSL3Q8N5Y2 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC30.99■■■□□ 2.55
MSL3Q8N5Y2 PVT1-219ENST00000523427 938 ntTSL 3 BASIC30.99■■■□□ 2.55
MSL3Q8N5Y2 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC30.98■■■□□ 2.55
MSL3Q8N5Y2 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC30.98■■■□□ 2.55
MSL3Q8N5Y2 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
MSL3Q8N5Y2 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
MSL3Q8N5Y2 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC30.96■■■□□ 2.55
MSL3Q8N5Y2 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
MSL3Q8N5Y2 RPS2-209ENST00000529806 993 ntTSL 3 BASIC30.95■■■□□ 2.55
MSL3Q8N5Y2 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
MSL3Q8N5Y2 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
MSL3Q8N5Y2 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
MSL3Q8N5Y2 ZNRF2P2-203ENST00000454624 420 ntBASIC30.92■■■□□ 2.54
MSL3Q8N5Y2 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
MSL3Q8N5Y2 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
MSL3Q8N5Y2 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC30.9■■■□□ 2.54
MSL3Q8N5Y2 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
MSL3Q8N5Y2 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
MSL3Q8N5Y2 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
MSL3Q8N5Y2 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
MSL3Q8N5Y2 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
MSL3Q8N5Y2 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
MSL3Q8N5Y2 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
MSL3Q8N5Y2 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC30.87■■■□□ 2.53
MSL3Q8N5Y2 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
MSL3Q8N5Y2 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
MSL3Q8N5Y2 HGH1-207ENST00000628266 258 ntTSL 5 BASIC30.86■■■□□ 2.53
MSL3Q8N5Y2 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC30.85■■■□□ 2.53
MSL3Q8N5Y2 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC30.85■■■□□ 2.53
MSL3Q8N5Y2 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC30.85■■■□□ 2.53
MSL3Q8N5Y2 HLA-V-202ENST00000446817 847 ntBASIC30.85■■■□□ 2.53
MSL3Q8N5Y2 MBP-237ENST00000579129 1052 ntTSL 5 BASIC30.84■■■□□ 2.53
MSL3Q8N5Y2 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC30.84■■■□□ 2.53
MSL3Q8N5Y2 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC30.84■■■□□ 2.53
MSL3Q8N5Y2 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
MSL3Q8N5Y2 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC30.82■■■□□ 2.52
MSL3Q8N5Y2 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
MSL3Q8N5Y2 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
MSL3Q8N5Y2 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
MSL3Q8N5Y2 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC30.8■■■□□ 2.52
MSL3Q8N5Y2 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC30.8■■■□□ 2.52
MSL3Q8N5Y2 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC30.79■■■□□ 2.52
MSL3Q8N5Y2 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
MSL3Q8N5Y2 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC30.79■■■□□ 2.52
MSL3Q8N5Y2 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
MSL3Q8N5Y2 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
MSL3Q8N5Y2 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
MSL3Q8N5Y2 DUX4L29-201ENST00000425409 679 ntBASIC30.77■■■□□ 2.52
MSL3Q8N5Y2 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
MSL3Q8N5Y2 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
MSL3Q8N5Y2 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC30.75■■■□□ 2.51
MSL3Q8N5Y2 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC30.75■■■□□ 2.51
MSL3Q8N5Y2 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
MSL3Q8N5Y2 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
MSL3Q8N5Y2 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC30.74■■■□□ 2.51
MSL3Q8N5Y2 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC30.73■■■□□ 2.51
MSL3Q8N5Y2 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC30.73■■■□□ 2.51
MSL3Q8N5Y2 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
MSL3Q8N5Y2 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC30.72■■■□□ 2.51
MSL3Q8N5Y2 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC30.72■■■□□ 2.51
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms