Protein–RNA interactions for Protein: Q6PJQ5

FOXR2, Forkhead box protein R2, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR2Q6PJQ5 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC29.9■■■□□ 2.38
FOXR2Q6PJQ5 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
FOXR2Q6PJQ5 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
FOXR2Q6PJQ5 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC29.86■■■□□ 2.37
FOXR2Q6PJQ5 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC29.86■■■□□ 2.37
FOXR2Q6PJQ5 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC29.86■■■□□ 2.37
FOXR2Q6PJQ5 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC29.84■■■□□ 2.37
FOXR2Q6PJQ5 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC29.83■■■□□ 2.37
FOXR2Q6PJQ5 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC29.82■■■□□ 2.36
FOXR2Q6PJQ5 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC29.8■■■□□ 2.36
FOXR2Q6PJQ5 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC29.78■■■□□ 2.36
FOXR2Q6PJQ5 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC29.77■■■□□ 2.36
FOXR2Q6PJQ5 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC29.77■■■□□ 2.36
FOXR2Q6PJQ5 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC29.77■■■□□ 2.36
FOXR2Q6PJQ5 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
FOXR2Q6PJQ5 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
FOXR2Q6PJQ5 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
FOXR2Q6PJQ5 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC29.74■■■□□ 2.35
FOXR2Q6PJQ5 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
FOXR2Q6PJQ5 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
FOXR2Q6PJQ5 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
FOXR2Q6PJQ5 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC29.7■■■□□ 2.35
FOXR2Q6PJQ5 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
FOXR2Q6PJQ5 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC29.68■■■□□ 2.34
FOXR2Q6PJQ5 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC29.68■■■□□ 2.34
FOXR2Q6PJQ5 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
FOXR2Q6PJQ5 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC29.66■■■□□ 2.34
FOXR2Q6PJQ5 KLF16-203ENST00000592313 508 ntTSL 3 BASIC29.66■■■□□ 2.34
FOXR2Q6PJQ5 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC29.66■■■□□ 2.34
FOXR2Q6PJQ5 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC29.65■■■□□ 2.34
FOXR2Q6PJQ5 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
FOXR2Q6PJQ5 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
FOXR2Q6PJQ5 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC29.63■■■□□ 2.33
FOXR2Q6PJQ5 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
FOXR2Q6PJQ5 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
FOXR2Q6PJQ5 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC29.62■■■□□ 2.33
FOXR2Q6PJQ5 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
FOXR2Q6PJQ5 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC29.6■■■□□ 2.33
FOXR2Q6PJQ5 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC29.59■■■□□ 2.33
FOXR2Q6PJQ5 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
FOXR2Q6PJQ5 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC29.59■■■□□ 2.33
FOXR2Q6PJQ5 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC29.59■■■□□ 2.33
FOXR2Q6PJQ5 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC29.59■■■□□ 2.33
FOXR2Q6PJQ5 AL161658.1-201ENST00000623641 1967 ntBASIC29.59■■■□□ 2.33
FOXR2Q6PJQ5 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC29.58■■■□□ 2.33
FOXR2Q6PJQ5 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
FOXR2Q6PJQ5 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
FOXR2Q6PJQ5 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC29.57■■■□□ 2.32
FOXR2Q6PJQ5 AL133380.1-201ENST00000506013 324 ntBASIC29.57■■■□□ 2.32
FOXR2Q6PJQ5 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
FOXR2Q6PJQ5 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC29.55■■■□□ 2.32
FOXR2Q6PJQ5 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
FOXR2Q6PJQ5 WASH5P-204ENST00000632292 975 ntBASIC29.54■■■□□ 2.32
FOXR2Q6PJQ5 ABCB10P1-201ENST00000614297 2181 ntBASIC29.54■■■□□ 2.32
FOXR2Q6PJQ5 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
FOXR2Q6PJQ5 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
FOXR2Q6PJQ5 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC29.51■■■□□ 2.31
FOXR2Q6PJQ5 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
FOXR2Q6PJQ5 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
FOXR2Q6PJQ5 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC29.49■■■□□ 2.31
FOXR2Q6PJQ5 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
FOXR2Q6PJQ5 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC29.48■■■□□ 2.31
FOXR2Q6PJQ5 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC29.47■■■□□ 2.31
FOXR2Q6PJQ5 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
FOXR2Q6PJQ5 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
FOXR2Q6PJQ5 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC29.46■■■□□ 2.31
FOXR2Q6PJQ5 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC29.46■■■□□ 2.31
FOXR2Q6PJQ5 ST7-AS1-201ENST00000456775 1889 ntBASIC29.45■■■□□ 2.31
FOXR2Q6PJQ5 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
FOXR2Q6PJQ5 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC29.45■■■□□ 2.3
FOXR2Q6PJQ5 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
FOXR2Q6PJQ5 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
FOXR2Q6PJQ5 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
FOXR2Q6PJQ5 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC29.44■■■□□ 2.3
FOXR2Q6PJQ5 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC29.44■■■□□ 2.3
FOXR2Q6PJQ5 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
FOXR2Q6PJQ5 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC29.43■■■□□ 2.3
FOXR2Q6PJQ5 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC29.43■■■□□ 2.3
FOXR2Q6PJQ5 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC29.42■■■□□ 2.3
FOXR2Q6PJQ5 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
FOXR2Q6PJQ5 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC29.41■■■□□ 2.3
FOXR2Q6PJQ5 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC29.4■■■□□ 2.3
FOXR2Q6PJQ5 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
FOXR2Q6PJQ5 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
FOXR2Q6PJQ5 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
FOXR2Q6PJQ5 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
FOXR2Q6PJQ5 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
FOXR2Q6PJQ5 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC29.37■■■□□ 2.29
FOXR2Q6PJQ5 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
FOXR2Q6PJQ5 AL135925.1-201ENST00000605920 1701 ntBASIC29.37■■■□□ 2.29
FOXR2Q6PJQ5 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC29.36■■■□□ 2.29
FOXR2Q6PJQ5 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC29.36■■■□□ 2.29
FOXR2Q6PJQ5 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
FOXR2Q6PJQ5 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
FOXR2Q6PJQ5 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC29.34■■■□□ 2.29
FOXR2Q6PJQ5 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC29.34■■■□□ 2.29
FOXR2Q6PJQ5 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC29.32■■■□□ 2.28
FOXR2Q6PJQ5 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC29.32■■■□□ 2.28
FOXR2Q6PJQ5 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
FOXR2Q6PJQ5 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC29.31■■■□□ 2.28
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms