Protein–RNA interactions for Protein: Q6PJQ5

FOXR2, Forkhead box protein R2, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR2Q6PJQ5 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC37.22■■■■□ 3.55
FOXR2Q6PJQ5 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC37.1■■■■□ 3.53
FOXR2Q6PJQ5 AL356512.1-201ENST00000607453 1739 ntBASIC36.48■■■■□ 3.43
FOXR2Q6PJQ5 HES6-203ENST00000409160 1600 ntTSL 2 BASIC36.39■■■■□ 3.42
FOXR2Q6PJQ5 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC36.28■■■■□ 3.4
FOXR2Q6PJQ5 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC36.24■■■■□ 3.39
FOXR2Q6PJQ5 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC35.97■■■■□ 3.35
FOXR2Q6PJQ5 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC35.93■■■■□ 3.34
FOXR2Q6PJQ5 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC35.85■■■■□ 3.33
FOXR2Q6PJQ5 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC35.57■■■■□ 3.29
FOXR2Q6PJQ5 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC35.4■■■■□ 3.26
FOXR2Q6PJQ5 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC35.14■■■■□ 3.22
FOXR2Q6PJQ5 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC35.11■■■■□ 3.21
FOXR2Q6PJQ5 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC35.01■■■■□ 3.19
FOXR2Q6PJQ5 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC34.73■■■■□ 3.15
FOXR2Q6PJQ5 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC34.73■■■■□ 3.15
FOXR2Q6PJQ5 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC34.71■■■■□ 3.15
FOXR2Q6PJQ5 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC34.65■■■■□ 3.14
FOXR2Q6PJQ5 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC34.58■■■■□ 3.13
FOXR2Q6PJQ5 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC34.37■■■■□ 3.09
FOXR2Q6PJQ5 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC34.36■■■■□ 3.09
FOXR2Q6PJQ5 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC34.26■■■■□ 3.08
FOXR2Q6PJQ5 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC34.2■■■■□ 3.06
FOXR2Q6PJQ5 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC34.14■■■■□ 3.06
FOXR2Q6PJQ5 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC34.06■■■■□ 3.04
FOXR2Q6PJQ5 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC34.03■■■■□ 3.04
FOXR2Q6PJQ5 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC34.03■■■■□ 3.04
FOXR2Q6PJQ5 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC34■■■■□ 3.03
FOXR2Q6PJQ5 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC33.97■■■■□ 3.03
FOXR2Q6PJQ5 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC33.93■■■■□ 3.02
FOXR2Q6PJQ5 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC33.8■■■■□ 3
FOXR2Q6PJQ5 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC33.75■■■□□ 2.99
FOXR2Q6PJQ5 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC33.74■■■□□ 2.99
FOXR2Q6PJQ5 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC33.74■■■□□ 2.99
FOXR2Q6PJQ5 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC33.71■■■□□ 2.99
FOXR2Q6PJQ5 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC33.65■■■□□ 2.98
FOXR2Q6PJQ5 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC33.64■■■□□ 2.98
FOXR2Q6PJQ5 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC33.56■■■□□ 2.96
FOXR2Q6PJQ5 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC33.37■■■□□ 2.93
FOXR2Q6PJQ5 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC33.34■■■□□ 2.93
FOXR2Q6PJQ5 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC33.29■■■□□ 2.92
FOXR2Q6PJQ5 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
FOXR2Q6PJQ5 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC33.15■■■□□ 2.9
FOXR2Q6PJQ5 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC33.14■■■□□ 2.9
FOXR2Q6PJQ5 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC33.12■■■□□ 2.89
FOXR2Q6PJQ5 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC33.08■■■□□ 2.89
FOXR2Q6PJQ5 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC33.08■■■□□ 2.89
FOXR2Q6PJQ5 ILK-212ENST00000532063 1617 ntTSL 2 BASIC33.02■■■□□ 2.88
FOXR2Q6PJQ5 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC32.97■■■□□ 2.87
FOXR2Q6PJQ5 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
FOXR2Q6PJQ5 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
FOXR2Q6PJQ5 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
FOXR2Q6PJQ5 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
FOXR2Q6PJQ5 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC32.78■■■□□ 2.84
FOXR2Q6PJQ5 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC32.77■■■□□ 2.84
FOXR2Q6PJQ5 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
FOXR2Q6PJQ5 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
FOXR2Q6PJQ5 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
FOXR2Q6PJQ5 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
FOXR2Q6PJQ5 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC32.59■■■□□ 2.81
FOXR2Q6PJQ5 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
FOXR2Q6PJQ5 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC32.51■■■□□ 2.8
FOXR2Q6PJQ5 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC32.48■■■□□ 2.79
FOXR2Q6PJQ5 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
FOXR2Q6PJQ5 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
FOXR2Q6PJQ5 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC32.38■■■□□ 2.77
FOXR2Q6PJQ5 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC32.38■■■□□ 2.77
FOXR2Q6PJQ5 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC32.38■■■□□ 2.77
FOXR2Q6PJQ5 INO80B-203ENST00000409917 796 ntTSL 2 BASIC32.36■■■□□ 2.77
FOXR2Q6PJQ5 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
FOXR2Q6PJQ5 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
FOXR2Q6PJQ5 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
FOXR2Q6PJQ5 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
FOXR2Q6PJQ5 AC015813.7-201ENST00000623294 581 ntBASIC32.2■■■□□ 2.75
FOXR2Q6PJQ5 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
FOXR2Q6PJQ5 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC32.19■■■□□ 2.74
FOXR2Q6PJQ5 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC32.15■■■□□ 2.74
FOXR2Q6PJQ5 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC32.13■■■□□ 2.73
FOXR2Q6PJQ5 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC32.12■■■□□ 2.73
FOXR2Q6PJQ5 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
FOXR2Q6PJQ5 AC145285.7-201ENST00000614819 1539 ntBASIC32.08■■■□□ 2.73
FOXR2Q6PJQ5 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC32.07■■■□□ 2.72
FOXR2Q6PJQ5 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC31.99■■■□□ 2.71
FOXR2Q6PJQ5 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
FOXR2Q6PJQ5 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC31.99■■■□□ 2.71
FOXR2Q6PJQ5 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
FOXR2Q6PJQ5 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
FOXR2Q6PJQ5 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
FOXR2Q6PJQ5 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC31.85■■■□□ 2.69
FOXR2Q6PJQ5 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
FOXR2Q6PJQ5 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC31.8■■■□□ 2.68
FOXR2Q6PJQ5 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
FOXR2Q6PJQ5 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
FOXR2Q6PJQ5 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC31.75■■■□□ 2.67
FOXR2Q6PJQ5 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
FOXR2Q6PJQ5 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
FOXR2Q6PJQ5 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
FOXR2Q6PJQ5 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC31.67■■■□□ 2.66
FOXR2Q6PJQ5 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC31.65■■■□□ 2.66
FOXR2Q6PJQ5 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.65
Retrieved 100 of 98,524 protein–RNA pairs in 10 ms