Protein–RNA interactions for Protein: Q68CR1

SEL1L3, Protein sel-1 homolog 3, humanhuman

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEL1L3Q68CR1 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
SEL1L3Q68CR1 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC27.58■■■□□ 2.01
SEL1L3Q68CR1 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
SEL1L3Q68CR1 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC27.57■■■□□ 2
SEL1L3Q68CR1 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC27.56■■■□□ 2
SEL1L3Q68CR1 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC27.55■■■□□ 2
SEL1L3Q68CR1 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC27.54■■■□□ 2
SEL1L3Q68CR1 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC27.53■■■□□ 2
SEL1L3Q68CR1 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC27.52■■■□□ 2
SEL1L3Q68CR1 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
SEL1L3Q68CR1 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC27.52■■■□□ 2
SEL1L3Q68CR1 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
SEL1L3Q68CR1 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC27.51■■□□□ 1.99
SEL1L3Q68CR1 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
SEL1L3Q68CR1 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC27.51■■□□□ 1.99
SEL1L3Q68CR1 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
SEL1L3Q68CR1 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC27.5■■□□□ 1.99
SEL1L3Q68CR1 EBPL-202ENST00000378268 680 ntTSL 3 BASIC27.49■■□□□ 1.99
SEL1L3Q68CR1 RPS2P35-201ENST00000443417 897 ntBASIC27.49■■□□□ 1.99
SEL1L3Q68CR1 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
SEL1L3Q68CR1 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC27.49■■□□□ 1.99
SEL1L3Q68CR1 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
SEL1L3Q68CR1 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC27.49■■□□□ 1.99
SEL1L3Q68CR1 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
SEL1L3Q68CR1 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC27.46■■□□□ 1.99
SEL1L3Q68CR1 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC27.46■■□□□ 1.99
SEL1L3Q68CR1 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC27.44■■□□□ 1.98
SEL1L3Q68CR1 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
SEL1L3Q68CR1 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC27.44■■□□□ 1.98
SEL1L3Q68CR1 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
SEL1L3Q68CR1 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
SEL1L3Q68CR1 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC27.4■■□□□ 1.98
SEL1L3Q68CR1 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC27.39■■□□□ 1.98
SEL1L3Q68CR1 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC27.39■■□□□ 1.98
SEL1L3Q68CR1 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
SEL1L3Q68CR1 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
SEL1L3Q68CR1 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
SEL1L3Q68CR1 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
SEL1L3Q68CR1 AL162393.1-201ENST00000437852 946 ntBASIC27.36■■□□□ 1.97
SEL1L3Q68CR1 NRG1-221ENST00000614767 762 ntTSL 5 BASIC27.36■■□□□ 1.97
SEL1L3Q68CR1 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
SEL1L3Q68CR1 HNRNPLP2-201ENST00000568980 1570 ntBASIC27.35■■□□□ 1.97
SEL1L3Q68CR1 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
SEL1L3Q68CR1 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
SEL1L3Q68CR1 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC27.35■■□□□ 1.97
SEL1L3Q68CR1 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
SEL1L3Q68CR1 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC27.35■■□□□ 1.97
SEL1L3Q68CR1 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
SEL1L3Q68CR1 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC27.34■■□□□ 1.97
SEL1L3Q68CR1 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC27.34■■□□□ 1.97
SEL1L3Q68CR1 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC27.34■■□□□ 1.97
SEL1L3Q68CR1 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC27.33■■□□□ 1.96
SEL1L3Q68CR1 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC27.32■■□□□ 1.96
SEL1L3Q68CR1 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
SEL1L3Q68CR1 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC27.32■■□□□ 1.96
SEL1L3Q68CR1 AP006261.1-201ENST00000584783 668 ntBASIC27.32■■□□□ 1.96
SEL1L3Q68CR1 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
SEL1L3Q68CR1 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
SEL1L3Q68CR1 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
SEL1L3Q68CR1 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC27.3■■□□□ 1.96
SEL1L3Q68CR1 WASH5P-204ENST00000632292 975 ntBASIC27.3■■□□□ 1.96
SEL1L3Q68CR1 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC27.29■■□□□ 1.96
SEL1L3Q68CR1 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
SEL1L3Q68CR1 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
SEL1L3Q68CR1 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.96
SEL1L3Q68CR1 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC27.26■■□□□ 1.95
SEL1L3Q68CR1 MIR762-201ENST00000390236 83 ntBASIC27.23■■□□□ 1.95
SEL1L3Q68CR1 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
SEL1L3Q68CR1 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
SEL1L3Q68CR1 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC27.22■■□□□ 1.95
SEL1L3Q68CR1 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC27.22■■□□□ 1.95
SEL1L3Q68CR1 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC27.21■■□□□ 1.95
SEL1L3Q68CR1 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC27.2■■□□□ 1.94
SEL1L3Q68CR1 CHML-205ENST00000638160 705 ntTSL 3 BASIC27.2■■□□□ 1.94
SEL1L3Q68CR1 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
SEL1L3Q68CR1 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
SEL1L3Q68CR1 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC27.18■■□□□ 1.94
SEL1L3Q68CR1 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC27.18■■□□□ 1.94
SEL1L3Q68CR1 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
SEL1L3Q68CR1 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
SEL1L3Q68CR1 DENR-202ENST00000455982 1052 ntTSL 5 BASIC27.17■■□□□ 1.94
SEL1L3Q68CR1 MIR3665-201ENST00000578708 105 ntBASIC27.17■■□□□ 1.94
SEL1L3Q68CR1 DUX4L28-201ENST00000623687 678 ntBASIC27.17■■□□□ 1.94
SEL1L3Q68CR1 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC27.16■■□□□ 1.94
SEL1L3Q68CR1 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
SEL1L3Q68CR1 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
SEL1L3Q68CR1 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
SEL1L3Q68CR1 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
SEL1L3Q68CR1 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
SEL1L3Q68CR1 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC27.15■■□□□ 1.94
SEL1L3Q68CR1 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC27.14■■□□□ 1.94
SEL1L3Q68CR1 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC27.14■■□□□ 1.94
SEL1L3Q68CR1 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
SEL1L3Q68CR1 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC27.13■■□□□ 1.93
SEL1L3Q68CR1 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
SEL1L3Q68CR1 AC005559.1-201ENST00000589661 871 ntBASIC27.12■■□□□ 1.93
SEL1L3Q68CR1 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
SEL1L3Q68CR1 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
SEL1L3Q68CR1 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
SEL1L3Q68CR1 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms