Protein–RNA interactions for Protein: P50406

HTR6, 5-hydroxytryptamine receptor 6, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR6P50406 ABCB10P1-201ENST00000614297 2181 ntBASIC26.27■■□□□ 1.8
HTR6P50406 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC26.24■■□□□ 1.79
HTR6P50406 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
HTR6P50406 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
HTR6P50406 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
HTR6P50406 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC26.23■■□□□ 1.79
HTR6P50406 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
HTR6P50406 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC26.21■■□□□ 1.79
HTR6P50406 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
HTR6P50406 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC26.2■■□□□ 1.78
HTR6P50406 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
HTR6P50406 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC26.19■■□□□ 1.78
HTR6P50406 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
HTR6P50406 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC26.18■■□□□ 1.78
HTR6P50406 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
HTR6P50406 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC26.16■■□□□ 1.78
HTR6P50406 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC26.15■■□□□ 1.78
HTR6P50406 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
HTR6P50406 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
HTR6P50406 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC26.14■■□□□ 1.78
HTR6P50406 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC26.14■■□□□ 1.78
HTR6P50406 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC26.13■■□□□ 1.77
HTR6P50406 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.77
HTR6P50406 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC26.13■■□□□ 1.77
HTR6P50406 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC26.12■■□□□ 1.77
HTR6P50406 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
HTR6P50406 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
HTR6P50406 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC26.11■■□□□ 1.77
HTR6P50406 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
HTR6P50406 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC26.09■■□□□ 1.77
HTR6P50406 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.76
HTR6P50406 AL161658.1-201ENST00000623641 1967 ntBASIC26.07■■□□□ 1.76
HTR6P50406 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC26.07■■□□□ 1.76
HTR6P50406 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
HTR6P50406 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
HTR6P50406 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
HTR6P50406 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC26.04■■□□□ 1.76
HTR6P50406 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
HTR6P50406 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
HTR6P50406 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
HTR6P50406 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
HTR6P50406 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
HTR6P50406 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
HTR6P50406 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC26.02■■□□□ 1.76
HTR6P50406 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC26.02■■□□□ 1.76
HTR6P50406 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC26.01■■□□□ 1.75
HTR6P50406 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC26■■□□□ 1.75
HTR6P50406 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
HTR6P50406 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
HTR6P50406 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
HTR6P50406 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC26■■□□□ 1.75
HTR6P50406 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
HTR6P50406 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC25.99■■□□□ 1.75
HTR6P50406 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC25.98■■□□□ 1.75
HTR6P50406 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC25.97■■□□□ 1.75
HTR6P50406 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
HTR6P50406 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC25.96■■□□□ 1.75
HTR6P50406 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC25.96■■□□□ 1.75
HTR6P50406 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
HTR6P50406 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
HTR6P50406 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
HTR6P50406 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC25.95■■□□□ 1.75
HTR6P50406 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
HTR6P50406 ABCB10P3-201ENST00000561950 2166 ntBASIC25.95■■□□□ 1.74
HTR6P50406 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
HTR6P50406 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC25.94■■□□□ 1.74
HTR6P50406 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
HTR6P50406 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
HTR6P50406 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
HTR6P50406 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC25.92■■□□□ 1.74
HTR6P50406 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
HTR6P50406 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
HTR6P50406 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC25.89■■□□□ 1.74
HTR6P50406 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
HTR6P50406 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC25.89■■□□□ 1.73
HTR6P50406 KLF16-203ENST00000592313 508 ntTSL 3 BASIC25.88■■□□□ 1.73
HTR6P50406 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC25.88■■□□□ 1.73
HTR6P50406 ST7-AS1-201ENST00000456775 1889 ntBASIC25.87■■□□□ 1.73
HTR6P50406 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
HTR6P50406 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
HTR6P50406 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
HTR6P50406 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
HTR6P50406 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
HTR6P50406 AC139426.1-201ENST00000568218 2529 ntBASIC25.86■■□□□ 1.73
HTR6P50406 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
HTR6P50406 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
HTR6P50406 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
HTR6P50406 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
HTR6P50406 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
HTR6P50406 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC25.83■■□□□ 1.73
HTR6P50406 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.72
HTR6P50406 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC25.82■■□□□ 1.72
HTR6P50406 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC25.82■■□□□ 1.72
HTR6P50406 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
HTR6P50406 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC25.81■■□□□ 1.72
HTR6P50406 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
HTR6P50406 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
HTR6P50406 AL133380.1-201ENST00000506013 324 ntBASIC25.81■■□□□ 1.72
HTR6P50406 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
HTR6P50406 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms