Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC26.4■■□□□ 1.82
SLC6A12P48065 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
SLC6A12P48065 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
SLC6A12P48065 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC26.38■■□□□ 1.81
SLC6A12P48065 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC26.38■■□□□ 1.81
SLC6A12P48065 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC26.37■■□□□ 1.81
SLC6A12P48065 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
SLC6A12P48065 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
SLC6A12P48065 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
SLC6A12P48065 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC26.33■■□□□ 1.81
SLC6A12P48065 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SLC6A12P48065 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
SLC6A12P48065 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
SLC6A12P48065 AL133380.1-201ENST00000506013 324 ntBASIC26.31■■□□□ 1.8
SLC6A12P48065 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
SLC6A12P48065 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC26.29■■□□□ 1.8
SLC6A12P48065 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC26.28■■□□□ 1.8
SLC6A12P48065 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC26.27■■□□□ 1.8
SLC6A12P48065 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
SLC6A12P48065 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SLC6A12P48065 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SLC6A12P48065 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC26.24■■□□□ 1.79
SLC6A12P48065 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC26.24■■□□□ 1.79
SLC6A12P48065 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
SLC6A12P48065 RARRES2P7-201ENST00000567349 469 ntBASIC26.23■■□□□ 1.79
SLC6A12P48065 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
SLC6A12P48065 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC26.22■■□□□ 1.79
SLC6A12P48065 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC26.2■■□□□ 1.79
SLC6A12P48065 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC26.2■■□□□ 1.78
SLC6A12P48065 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
SLC6A12P48065 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC26.19■■□□□ 1.78
SLC6A12P48065 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SLC6A12P48065 WASH5P-204ENST00000632292 975 ntBASIC26.19■■□□□ 1.78
SLC6A12P48065 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SLC6A12P48065 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
SLC6A12P48065 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC26.18■■□□□ 1.78
SLC6A12P48065 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
SLC6A12P48065 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
SLC6A12P48065 AL161658.1-201ENST00000623641 1967 ntBASIC26.16■■□□□ 1.78
SLC6A12P48065 SETD8P1-201ENST00000623146 1180 ntBASIC26.16■■□□□ 1.78
SLC6A12P48065 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC26.16■■□□□ 1.78
SLC6A12P48065 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
SLC6A12P48065 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
SLC6A12P48065 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC26.12■■□□□ 1.77
SLC6A12P48065 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
SLC6A12P48065 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
SLC6A12P48065 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
SLC6A12P48065 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC26.11■■□□□ 1.77
SLC6A12P48065 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
SLC6A12P48065 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC26.1■■□□□ 1.77
SLC6A12P48065 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
SLC6A12P48065 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC26.09■■□□□ 1.77
SLC6A12P48065 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
SLC6A12P48065 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
SLC6A12P48065 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC26.06■■□□□ 1.76
SLC6A12P48065 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
SLC6A12P48065 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC26.05■■□□□ 1.76
SLC6A12P48065 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
SLC6A12P48065 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC26.04■■□□□ 1.76
SLC6A12P48065 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
SLC6A12P48065 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
SLC6A12P48065 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
SLC6A12P48065 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
SLC6A12P48065 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
SLC6A12P48065 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC26.02■■□□□ 1.76
SLC6A12P48065 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC26.01■■□□□ 1.75
SLC6A12P48065 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC26■■□□□ 1.75
SLC6A12P48065 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC26■■□□□ 1.75
SLC6A12P48065 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
SLC6A12P48065 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
SLC6A12P48065 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC25.98■■□□□ 1.75
SLC6A12P48065 ABCB10P1-201ENST00000614297 2181 ntBASIC25.98■■□□□ 1.75
SLC6A12P48065 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC25.98■■□□□ 1.75
SLC6A12P48065 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
SLC6A12P48065 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
SLC6A12P48065 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC25.97■■□□□ 1.75
SLC6A12P48065 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
SLC6A12P48065 AC136428.2-201ENST00000563187 214 ntBASIC25.97■■□□□ 1.75
SLC6A12P48065 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
SLC6A12P48065 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
SLC6A12P48065 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
SLC6A12P48065 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
SLC6A12P48065 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
SLC6A12P48065 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
SLC6A12P48065 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC25.93■■□□□ 1.74
SLC6A12P48065 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC25.93■■□□□ 1.74
SLC6A12P48065 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC25.93■■□□□ 1.74
SLC6A12P48065 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
SLC6A12P48065 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC25.93■■□□□ 1.74
SLC6A12P48065 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC25.92■■□□□ 1.74
SLC6A12P48065 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
SLC6A12P48065 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
SLC6A12P48065 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
SLC6A12P48065 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
SLC6A12P48065 AC097358.2-201ENST00000607541 1159 ntBASIC25.9■■□□□ 1.74
SLC6A12P48065 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC25.9■■□□□ 1.74
SLC6A12P48065 AL391121.1-201ENST00000607967 1349 ntBASIC25.89■■□□□ 1.74
SLC6A12P48065 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC25.89■■□□□ 1.74
SLC6A12P48065 CAHM-201ENST00000604200 896 ntBASIC25.89■■□□□ 1.74
SLC6A12P48065 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms