Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC32.94■■■□□ 2.86
SLC6A12P48065 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
SLC6A12P48065 AL356512.1-201ENST00000607453 1739 ntBASIC32.26■■■□□ 2.76
SLC6A12P48065 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC32.16■■■□□ 2.74
SLC6A12P48065 HES6-203ENST00000409160 1600 ntTSL 2 BASIC32■■■□□ 2.71
SLC6A12P48065 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
SLC6A12P48065 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
SLC6A12P48065 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC31.79■■■□□ 2.68
SLC6A12P48065 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC31.71■■■□□ 2.67
SLC6A12P48065 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC31.38■■■□□ 2.61
SLC6A12P48065 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC31.35■■■□□ 2.61
SLC6A12P48065 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC31.28■■■□□ 2.6
SLC6A12P48065 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
SLC6A12P48065 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC30.86■■■□□ 2.53
SLC6A12P48065 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC30.81■■■□□ 2.52
SLC6A12P48065 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC30.59■■■□□ 2.49
SLC6A12P48065 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC30.54■■■□□ 2.48
SLC6A12P48065 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC30.47■■■□□ 2.47
SLC6A12P48065 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC30.42■■■□□ 2.46
SLC6A12P48065 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC30.39■■■□□ 2.46
SLC6A12P48065 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
SLC6A12P48065 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC30.26■■■□□ 2.43
SLC6A12P48065 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC30.22■■■□□ 2.43
SLC6A12P48065 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC30.22■■■□□ 2.43
SLC6A12P48065 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC30.2■■■□□ 2.43
SLC6A12P48065 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC30.15■■■□□ 2.42
SLC6A12P48065 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC30.12■■■□□ 2.41
SLC6A12P48065 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
SLC6A12P48065 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
SLC6A12P48065 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC29.91■■■□□ 2.38
SLC6A12P48065 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
SLC6A12P48065 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC29.82■■■□□ 2.36
SLC6A12P48065 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
SLC6A12P48065 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC29.75■■■□□ 2.35
SLC6A12P48065 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC29.66■■■□□ 2.34
SLC6A12P48065 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC29.65■■■□□ 2.34
SLC6A12P48065 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
SLC6A12P48065 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
SLC6A12P48065 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC29.53■■■□□ 2.32
SLC6A12P48065 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
SLC6A12P48065 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC29.45■■■□□ 2.31
SLC6A12P48065 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC29.21■■■□□ 2.27
SLC6A12P48065 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
SLC6A12P48065 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC29.18■■■□□ 2.26
SLC6A12P48065 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC29.16■■■□□ 2.26
SLC6A12P48065 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
SLC6A12P48065 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
SLC6A12P48065 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
SLC6A12P48065 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
SLC6A12P48065 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC29.11■■■□□ 2.25
SLC6A12P48065 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC29.08■■■□□ 2.25
SLC6A12P48065 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC29.04■■■□□ 2.24
SLC6A12P48065 ILK-212ENST00000532063 1617 ntTSL 2 BASIC29.02■■■□□ 2.24
SLC6A12P48065 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
SLC6A12P48065 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC28.96■■■□□ 2.23
SLC6A12P48065 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC28.95■■■□□ 2.22
SLC6A12P48065 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC28.95■■■□□ 2.22
SLC6A12P48065 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC28.95■■■□□ 2.22
SLC6A12P48065 INO80B-203ENST00000409917 796 ntTSL 2 BASIC28.94■■■□□ 2.22
SLC6A12P48065 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
SLC6A12P48065 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC28.91■■■□□ 2.22
SLC6A12P48065 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
SLC6A12P48065 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC28.75■■■□□ 2.19
SLC6A12P48065 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
SLC6A12P48065 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
SLC6A12P48065 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
SLC6A12P48065 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC28.69■■■□□ 2.18
SLC6A12P48065 AC015813.7-201ENST00000623294 581 ntBASIC28.68■■■□□ 2.18
SLC6A12P48065 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC28.67■■■□□ 2.18
SLC6A12P48065 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.17
SLC6A12P48065 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
SLC6A12P48065 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
SLC6A12P48065 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
SLC6A12P48065 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC28.5■■■□□ 2.15
SLC6A12P48065 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC28.49■■■□□ 2.15
SLC6A12P48065 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC28.44■■■□□ 2.14
SLC6A12P48065 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC28.42■■■□□ 2.14
SLC6A12P48065 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
SLC6A12P48065 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
SLC6A12P48065 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
SLC6A12P48065 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
SLC6A12P48065 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC28.29■■■□□ 2.12
SLC6A12P48065 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC28.29■■■□□ 2.12
SLC6A12P48065 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC28.29■■■□□ 2.12
SLC6A12P48065 AC145285.7-201ENST00000614819 1539 ntBASIC28.26■■■□□ 2.11
SLC6A12P48065 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
SLC6A12P48065 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC28.22■■■□□ 2.11
SLC6A12P48065 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC28.22■■■□□ 2.11
SLC6A12P48065 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
SLC6A12P48065 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
SLC6A12P48065 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
SLC6A12P48065 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
SLC6A12P48065 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
SLC6A12P48065 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
SLC6A12P48065 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC28.1■■■□□ 2.09
SLC6A12P48065 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC28.03■■■□□ 2.08
SLC6A12P48065 AC006077.2-201ENST00000623591 457 ntBASIC28.02■■■□□ 2.08
SLC6A12P48065 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
SLC6A12P48065 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC28.01■■■□□ 2.07
SLC6A12P48065 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms