Protein–RNA interactions for Protein: P17980

PSMC3, 26S proteasome regulatory subunit 6A, humanhuman

Predictions only

Length 439 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3P17980 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
PSMC3P17980 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC28.4■■■□□ 2.14
PSMC3P17980 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
PSMC3P17980 WASH5P-204ENST00000632292 975 ntBASIC28.39■■■□□ 2.14
PSMC3P17980 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC28.39■■■□□ 2.13
PSMC3P17980 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC28.38■■■□□ 2.13
PSMC3P17980 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
PSMC3P17980 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
PSMC3P17980 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC28.35■■■□□ 2.13
PSMC3P17980 PVT1-219ENST00000523427 938 ntTSL 3 BASIC28.34■■■□□ 2.13
PSMC3P17980 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
PSMC3P17980 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC28.32■■■□□ 2.12
PSMC3P17980 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC28.32■■■□□ 2.12
PSMC3P17980 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC28.32■■■□□ 2.12
PSMC3P17980 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
PSMC3P17980 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
PSMC3P17980 BOD1-206ENST00000480951 814 ntTSL 2 BASIC28.3■■■□□ 2.12
PSMC3P17980 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC28.3■■■□□ 2.12
PSMC3P17980 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
PSMC3P17980 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
PSMC3P17980 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC28.28■■■□□ 2.12
PSMC3P17980 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC28.27■■■□□ 2.12
PSMC3P17980 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC28.26■■■□□ 2.11
PSMC3P17980 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC28.26■■■□□ 2.11
PSMC3P17980 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC28.26■■■□□ 2.11
PSMC3P17980 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC28.26■■■□□ 2.11
PSMC3P17980 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
PSMC3P17980 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC28.24■■■□□ 2.11
PSMC3P17980 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC28.23■■■□□ 2.11
PSMC3P17980 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
PSMC3P17980 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
PSMC3P17980 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
PSMC3P17980 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
PSMC3P17980 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
PSMC3P17980 RPS2-209ENST00000529806 993 ntTSL 3 BASIC28.2■■■□□ 2.1
PSMC3P17980 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC28.2■■■□□ 2.1
PSMC3P17980 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
PSMC3P17980 HLA-V-202ENST00000446817 847 ntBASIC28.19■■■□□ 2.1
PSMC3P17980 ZNRF2P2-203ENST00000454624 420 ntBASIC28.19■■■□□ 2.1
PSMC3P17980 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
PSMC3P17980 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC28.18■■■□□ 2.1
PSMC3P17980 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
PSMC3P17980 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
PSMC3P17980 MBP-237ENST00000579129 1052 ntTSL 5 BASIC28.17■■■□□ 2.1
PSMC3P17980 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
PSMC3P17980 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
PSMC3P17980 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC28.13■■■□□ 2.09
PSMC3P17980 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
PSMC3P17980 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
PSMC3P17980 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC28.12■■■□□ 2.09
PSMC3P17980 HGH1-207ENST00000628266 258 ntTSL 5 BASIC28.11■■■□□ 2.09
PSMC3P17980 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
PSMC3P17980 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
PSMC3P17980 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC28.09■■■□□ 2.09
PSMC3P17980 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
PSMC3P17980 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
PSMC3P17980 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
PSMC3P17980 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC28.08■■■□□ 2.09
PSMC3P17980 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC28.08■■■□□ 2.09
PSMC3P17980 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
PSMC3P17980 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC28.08■■■□□ 2.08
PSMC3P17980 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
PSMC3P17980 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC28.06■■■□□ 2.08
PSMC3P17980 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
PSMC3P17980 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC28.06■■■□□ 2.08
PSMC3P17980 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC28.06■■■□□ 2.08
PSMC3P17980 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
PSMC3P17980 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC28.05■■■□□ 2.08
PSMC3P17980 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
PSMC3P17980 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
PSMC3P17980 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
PSMC3P17980 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC28.04■■■□□ 2.08
PSMC3P17980 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
PSMC3P17980 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC28.04■■■□□ 2.08
PSMC3P17980 DUX4L29-201ENST00000425409 679 ntBASIC28.03■■■□□ 2.08
PSMC3P17980 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
PSMC3P17980 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
PSMC3P17980 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC28.02■■■□□ 2.08
PSMC3P17980 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
PSMC3P17980 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC28.01■■■□□ 2.07
PSMC3P17980 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
PSMC3P17980 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC27.99■■■□□ 2.07
PSMC3P17980 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC27.98■■■□□ 2.07
PSMC3P17980 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
PSMC3P17980 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC27.98■■■□□ 2.07
PSMC3P17980 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
PSMC3P17980 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
PSMC3P17980 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC27.96■■■□□ 2.07
PSMC3P17980 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC27.95■■■□□ 2.06
PSMC3P17980 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
PSMC3P17980 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC27.94■■■□□ 2.06
PSMC3P17980 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
PSMC3P17980 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC27.93■■■□□ 2.06
PSMC3P17980 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
PSMC3P17980 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC27.91■■■□□ 2.06
PSMC3P17980 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC27.91■■■□□ 2.06
PSMC3P17980 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC27.9■■■□□ 2.06
PSMC3P17980 CIB2-204ENST00000557846 934 ntTSL 3 BASIC27.9■■■□□ 2.06
PSMC3P17980 AC021231.2-201ENST00000594613 730 ntBASIC27.9■■■□□ 2.06
PSMC3P17980 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC27.9■■■□□ 2.06
Retrieved 100 of 98,524 protein–RNA pairs in 155.6 ms