Protein–RNA interactions for Protein: P05388

RPLP0, 60S acidic ribosomal protein P0, humanhuman

Known RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPLP0P05388 AC087741.3-201ENST00000624270 1347 ntBASIC26.52■■□□□ 1.84
RPLP0P05388 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.84
RPLP0P05388 AC005559.1-201ENST00000589661 871 ntBASIC26.51■■□□□ 1.83
RPLP0P05388 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
RPLP0P05388 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC26.5■■□□□ 1.83
RPLP0P05388 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC26.49■■□□□ 1.83
RPLP0P05388 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
RPLP0P05388 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
RPLP0P05388 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
RPLP0P05388 WASH5P-204ENST00000632292 975 ntBASIC26.46■■□□□ 1.83
RPLP0P05388 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
RPLP0P05388 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC26.45■■□□□ 1.82
RPLP0P05388 DENR-202ENST00000455982 1052 ntTSL 5 BASIC26.45■■□□□ 1.82
RPLP0P05388 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC26.44■■□□□ 1.82
RPLP0P05388 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC26.44■■□□□ 1.82
RPLP0P05388 AC044849.2-201ENST00000606596 710 ntBASIC26.44■■□□□ 1.82
RPLP0P05388 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC26.43■■□□□ 1.82
RPLP0P05388 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
RPLP0P05388 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC26.41■■□□□ 1.82
RPLP0P05388 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
RPLP0P05388 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
RPLP0P05388 ABHD17AP4-201ENST00000411545 909 ntBASIC26.39■■□□□ 1.82
RPLP0P05388 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC26.39■■□□□ 1.81
RPLP0P05388 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC26.39■■□□□ 1.81
RPLP0P05388 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
RPLP0P05388 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
RPLP0P05388 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
RPLP0P05388 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
RPLP0P05388 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC26.37■■□□□ 1.81
RPLP0P05388 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
RPLP0P05388 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC26.36■■□□□ 1.81
RPLP0P05388 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC26.36■■□□□ 1.81
RPLP0P05388 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RPLP0P05388 MLEC-202ENST00000412616 841 ntTSL 3 BASIC26.35■■□□□ 1.81
RPLP0P05388 MIR7108-201ENST00000614319 87 ntBASIC26.34■■□□□ 1.81
RPLP0P05388 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
RPLP0P05388 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC26.33■■□□□ 1.81
RPLP0P05388 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
RPLP0P05388 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
RPLP0P05388 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
RPLP0P05388 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RPLP0P05388 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
RPLP0P05388 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC26.31■■□□□ 1.8
RPLP0P05388 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
RPLP0P05388 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RPLP0P05388 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RPLP0P05388 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
RPLP0P05388 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
RPLP0P05388 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
RPLP0P05388 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
RPLP0P05388 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC26.27■■□□□ 1.8
RPLP0P05388 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
RPLP0P05388 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC26.25■■□□□ 1.79
RPLP0P05388 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
RPLP0P05388 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC26.25■■□□□ 1.79
RPLP0P05388 RPS2-209ENST00000529806 993 ntTSL 3 BASIC26.24■■□□□ 1.79
RPLP0P05388 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
RPLP0P05388 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC26.23■■□□□ 1.79
RPLP0P05388 BOD1-206ENST00000480951 814 ntTSL 2 BASIC26.23■■□□□ 1.79
RPLP0P05388 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC26.23■■□□□ 1.79
RPLP0P05388 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
RPLP0P05388 PVT1-219ENST00000523427 938 ntTSL 3 BASIC26.23■■□□□ 1.79
RPLP0P05388 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
RPLP0P05388 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
RPLP0P05388 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
RPLP0P05388 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
RPLP0P05388 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
RPLP0P05388 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
RPLP0P05388 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC26.2■■□□□ 1.78
RPLP0P05388 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
RPLP0P05388 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
RPLP0P05388 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
RPLP0P05388 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
RPLP0P05388 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC26.19■■□□□ 1.78
RPLP0P05388 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC26.19■■□□□ 1.78
RPLP0P05388 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
RPLP0P05388 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC26.18■■□□□ 1.78
RPLP0P05388 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
RPLP0P05388 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC26.18■■□□□ 1.78
RPLP0P05388 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC26.17■■□□□ 1.78
RPLP0P05388 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC26.15■■□□□ 1.78
RPLP0P05388 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC26.15■■□□□ 1.78
RPLP0P05388 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC26.15■■□□□ 1.78
RPLP0P05388 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC26.15■■□□□ 1.78
RPLP0P05388 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC26.15■■□□□ 1.78
RPLP0P05388 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC26.15■■□□□ 1.78
RPLP0P05388 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
RPLP0P05388 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC26.14■■□□□ 1.78
RPLP0P05388 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
RPLP0P05388 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
RPLP0P05388 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
RPLP0P05388 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.77
RPLP0P05388 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
RPLP0P05388 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
RPLP0P05388 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
RPLP0P05388 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC26.12■■□□□ 1.77
RPLP0P05388 ZNRF2P2-203ENST00000454624 420 ntBASIC26.1■■□□□ 1.77
RPLP0P05388 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC26.09■■□□□ 1.77
RPLP0P05388 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
RPLP0P05388 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms