Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NDUFA1O15239 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NDUFA1O15239 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC18.49■□□□□ 0.55
NDUFA1O15239 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NDUFA1O15239 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NDUFA1O15239 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC18.48■□□□□ 0.55
NDUFA1O15239 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC18.48■□□□□ 0.55
NDUFA1O15239 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
NDUFA1O15239 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NDUFA1O15239 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NDUFA1O15239 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NDUFA1O15239 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC18.44■□□□□ 0.54
NDUFA1O15239 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
NDUFA1O15239 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
NDUFA1O15239 AC006077.2-201ENST00000623591 457 ntBASIC18.43■□□□□ 0.54
NDUFA1O15239 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
NDUFA1O15239 AC139426.1-201ENST00000568218 2529 ntBASIC18.43■□□□□ 0.54
NDUFA1O15239 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
NDUFA1O15239 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC18.41■□□□□ 0.54
NDUFA1O15239 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NDUFA1O15239 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
NDUFA1O15239 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
NDUFA1O15239 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
NDUFA1O15239 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC18.39■□□□□ 0.53
NDUFA1O15239 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NDUFA1O15239 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
NDUFA1O15239 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NDUFA1O15239 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC18.37■□□□□ 0.53
NDUFA1O15239 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
NDUFA1O15239 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
NDUFA1O15239 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
NDUFA1O15239 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NDUFA1O15239 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
NDUFA1O15239 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC18.36■□□□□ 0.53
NDUFA1O15239 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NDUFA1O15239 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
NDUFA1O15239 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NDUFA1O15239 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
NDUFA1O15239 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NDUFA1O15239 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC18.34■□□□□ 0.53
NDUFA1O15239 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
NDUFA1O15239 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
NDUFA1O15239 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
NDUFA1O15239 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NDUFA1O15239 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
NDUFA1O15239 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC18.31■□□□□ 0.52
NDUFA1O15239 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NDUFA1O15239 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
NDUFA1O15239 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NDUFA1O15239 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NDUFA1O15239 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
NDUFA1O15239 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
NDUFA1O15239 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NDUFA1O15239 ZNRF2P1-201ENST00000441407 443 ntBASIC18.27■□□□□ 0.52
NDUFA1O15239 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
NDUFA1O15239 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
NDUFA1O15239 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
NDUFA1O15239 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
NDUFA1O15239 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NDUFA1O15239 MVK-208ENST00000539696 608 ntTSL 5 BASIC18.26■□□□□ 0.51
NDUFA1O15239 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NDUFA1O15239 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NDUFA1O15239 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NDUFA1O15239 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC18.24■□□□□ 0.51
NDUFA1O15239 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NDUFA1O15239 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NDUFA1O15239 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NDUFA1O15239 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NDUFA1O15239 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NDUFA1O15239 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NDUFA1O15239 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NDUFA1O15239 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NDUFA1O15239 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC18.23■□□□□ 0.51
NDUFA1O15239 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NDUFA1O15239 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC18.23■□□□□ 0.51
NDUFA1O15239 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NDUFA1O15239 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
NDUFA1O15239 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC18.22■□□□□ 0.51
NDUFA1O15239 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC18.22■□□□□ 0.51
NDUFA1O15239 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC18.21■□□□□ 0.51
NDUFA1O15239 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC18.21■□□□□ 0.51
NDUFA1O15239 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
NDUFA1O15239 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NDUFA1O15239 ST7-AS1-201ENST00000456775 1889 ntBASIC18.2■□□□□ 0.5
NDUFA1O15239 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NDUFA1O15239 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NDUFA1O15239 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NDUFA1O15239 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC18.19■□□□□ 0.5
NDUFA1O15239 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NDUFA1O15239 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC18.17■□□□□ 0.5
NDUFA1O15239 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NDUFA1O15239 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NDUFA1O15239 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NDUFA1O15239 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NDUFA1O15239 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC18.16■□□□□ 0.5
NDUFA1O15239 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
NDUFA1O15239 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
NDUFA1O15239 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NDUFA1O15239 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC18.16■□□□□ 0.5
NDUFA1O15239 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 13 ms