Protein–RNA interactions for Protein: A8K7I4

CLCA1, Calcium-activated chloride channel regulator 1, humanhuman

Predictions only

Length 914 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA1A8K7I4 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
CLCA1A8K7I4 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC25.19■■□□□ 1.62
CLCA1A8K7I4 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC25.18■■□□□ 1.62
CLCA1A8K7I4 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
CLCA1A8K7I4 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC25.15■■□□□ 1.62
CLCA1A8K7I4 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC25.14■■□□□ 1.62
CLCA1A8K7I4 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CLCA1A8K7I4 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
CLCA1A8K7I4 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CLCA1A8K7I4 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC25.13■■□□□ 1.61
CLCA1A8K7I4 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CLCA1A8K7I4 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC25.12■■□□□ 1.61
CLCA1A8K7I4 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC25.12■■□□□ 1.61
CLCA1A8K7I4 SETD8P1-201ENST00000623146 1180 ntBASIC25.11■■□□□ 1.61
CLCA1A8K7I4 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CLCA1A8K7I4 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC25.11■■□□□ 1.61
CLCA1A8K7I4 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CLCA1A8K7I4 ABCB10P3-201ENST00000561950 2166 ntBASIC25.1■■□□□ 1.61
CLCA1A8K7I4 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
CLCA1A8K7I4 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC25.1■■□□□ 1.61
CLCA1A8K7I4 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC25.1■■□□□ 1.61
CLCA1A8K7I4 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC25.1■■□□□ 1.61
CLCA1A8K7I4 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CLCA1A8K7I4 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC25.09■■□□□ 1.61
CLCA1A8K7I4 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CLCA1A8K7I4 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CLCA1A8K7I4 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CLCA1A8K7I4 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC25.07■■□□□ 1.6
CLCA1A8K7I4 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC25.05■■□□□ 1.6
CLCA1A8K7I4 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
CLCA1A8K7I4 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CLCA1A8K7I4 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
CLCA1A8K7I4 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC25.03■■□□□ 1.6
CLCA1A8K7I4 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CLCA1A8K7I4 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
CLCA1A8K7I4 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC25.03■■□□□ 1.6
CLCA1A8K7I4 AC097358.2-201ENST00000607541 1159 ntBASIC25.03■■□□□ 1.6
CLCA1A8K7I4 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC25.02■■□□□ 1.6
CLCA1A8K7I4 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CLCA1A8K7I4 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
CLCA1A8K7I4 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CLCA1A8K7I4 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
CLCA1A8K7I4 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CLCA1A8K7I4 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CLCA1A8K7I4 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
CLCA1A8K7I4 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC24.99■■□□□ 1.59
CLCA1A8K7I4 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC24.98■■□□□ 1.59
CLCA1A8K7I4 AC136428.2-201ENST00000563187 214 ntBASIC24.98■■□□□ 1.59
CLCA1A8K7I4 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
CLCA1A8K7I4 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CLCA1A8K7I4 AC120057.4-201ENST00000624722 1615 ntBASIC24.97■■□□□ 1.59
CLCA1A8K7I4 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC24.97■■□□□ 1.59
CLCA1A8K7I4 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
CLCA1A8K7I4 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CLCA1A8K7I4 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC24.96■■□□□ 1.59
CLCA1A8K7I4 SHF-206ENST00000560471 2499 ntTSL 5 BASIC24.95■■□□□ 1.59
CLCA1A8K7I4 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC24.94■■□□□ 1.58
CLCA1A8K7I4 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
CLCA1A8K7I4 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
CLCA1A8K7I4 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC24.92■■□□□ 1.58
CLCA1A8K7I4 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC24.92■■□□□ 1.58
CLCA1A8K7I4 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC24.91■■□□□ 1.58
CLCA1A8K7I4 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
CLCA1A8K7I4 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CLCA1A8K7I4 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC24.9■■□□□ 1.58
CLCA1A8K7I4 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
CLCA1A8K7I4 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC24.89■■□□□ 1.58
CLCA1A8K7I4 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
CLCA1A8K7I4 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC24.88■■□□□ 1.57
CLCA1A8K7I4 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CLCA1A8K7I4 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC24.87■■□□□ 1.57
CLCA1A8K7I4 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC24.87■■□□□ 1.57
CLCA1A8K7I4 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
CLCA1A8K7I4 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC24.87■■□□□ 1.57
CLCA1A8K7I4 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC24.86■■□□□ 1.57
CLCA1A8K7I4 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC24.86■■□□□ 1.57
CLCA1A8K7I4 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC24.86■■□□□ 1.57
CLCA1A8K7I4 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC24.85■■□□□ 1.57
CLCA1A8K7I4 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CLCA1A8K7I4 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC24.84■■□□□ 1.57
CLCA1A8K7I4 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC24.83■■□□□ 1.57
CLCA1A8K7I4 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
CLCA1A8K7I4 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
CLCA1A8K7I4 AL133380.1-201ENST00000506013 324 ntBASIC24.82■■□□□ 1.56
CLCA1A8K7I4 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC24.82■■□□□ 1.56
CLCA1A8K7I4 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CLCA1A8K7I4 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC24.81■■□□□ 1.56
CLCA1A8K7I4 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
CLCA1A8K7I4 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CLCA1A8K7I4 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC24.8■■□□□ 1.56
CLCA1A8K7I4 AC139426.1-201ENST00000568218 2529 ntBASIC24.78■■□□□ 1.56
CLCA1A8K7I4 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC24.78■■□□□ 1.56
CLCA1A8K7I4 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
CLCA1A8K7I4 SUZ12P1-203ENST00000578195 985 ntBASIC24.77■■□□□ 1.56
CLCA1A8K7I4 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC24.77■■□□□ 1.56
CLCA1A8K7I4 AL161658.1-201ENST00000623641 1967 ntBASIC24.76■■□□□ 1.55
CLCA1A8K7I4 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC24.76■■□□□ 1.55
CLCA1A8K7I4 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CLCA1A8K7I4 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CLCA1A8K7I4 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC24.75■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms