Protein–RNA interactions for Protein: A4FU49

SH3D21, SH3 domain-containing protein 21, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21A4FU49 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
SH3D21A4FU49 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
SH3D21A4FU49 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC25.03■■□□□ 1.6
SH3D21A4FU49 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SH3D21A4FU49 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SH3D21A4FU49 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC25.03■■□□□ 1.6
SH3D21A4FU49 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC25.03■■□□□ 1.6
SH3D21A4FU49 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
SH3D21A4FU49 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
SH3D21A4FU49 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC25.02■■□□□ 1.6
SH3D21A4FU49 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC25.01■■□□□ 1.59
SH3D21A4FU49 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC25■■□□□ 1.59
SH3D21A4FU49 AC120057.4-201ENST00000624722 1615 ntBASIC25■■□□□ 1.59
SH3D21A4FU49 ABCB10P3-201ENST00000561950 2166 ntBASIC24.99■■□□□ 1.59
SH3D21A4FU49 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
SH3D21A4FU49 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
SH3D21A4FU49 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC24.97■■□□□ 1.59
SH3D21A4FU49 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC24.97■■□□□ 1.59
SH3D21A4FU49 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC24.97■■□□□ 1.59
SH3D21A4FU49 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC24.96■■□□□ 1.59
SH3D21A4FU49 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC24.96■■□□□ 1.59
SH3D21A4FU49 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
SH3D21A4FU49 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC24.95■■□□□ 1.59
SH3D21A4FU49 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC24.95■■□□□ 1.59
SH3D21A4FU49 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
SH3D21A4FU49 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC24.95■■□□□ 1.58
SH3D21A4FU49 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC24.92■■□□□ 1.58
SH3D21A4FU49 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
SH3D21A4FU49 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
SH3D21A4FU49 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
SH3D21A4FU49 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
SH3D21A4FU49 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
SH3D21A4FU49 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC24.9■■□□□ 1.58
SH3D21A4FU49 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
SH3D21A4FU49 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC24.9■■□□□ 1.58
SH3D21A4FU49 KLF16-203ENST00000592313 508 ntTSL 3 BASIC24.9■■□□□ 1.58
SH3D21A4FU49 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC24.9■■□□□ 1.58
SH3D21A4FU49 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
SH3D21A4FU49 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
SH3D21A4FU49 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
SH3D21A4FU49 AC097358.2-201ENST00000607541 1159 ntBASIC24.88■■□□□ 1.57
SH3D21A4FU49 SETD8P1-201ENST00000623146 1180 ntBASIC24.87■■□□□ 1.57
SH3D21A4FU49 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC24.87■■□□□ 1.57
SH3D21A4FU49 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
SH3D21A4FU49 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
SH3D21A4FU49 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
SH3D21A4FU49 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
SH3D21A4FU49 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
SH3D21A4FU49 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC24.84■■□□□ 1.57
SH3D21A4FU49 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC24.83■■□□□ 1.57
SH3D21A4FU49 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
SH3D21A4FU49 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC24.83■■□□□ 1.56
SH3D21A4FU49 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC24.82■■□□□ 1.56
SH3D21A4FU49 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC24.82■■□□□ 1.56
SH3D21A4FU49 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC24.81■■□□□ 1.56
SH3D21A4FU49 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC24.81■■□□□ 1.56
SH3D21A4FU49 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC24.81■■□□□ 1.56
SH3D21A4FU49 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC24.8■■□□□ 1.56
SH3D21A4FU49 MVK-208ENST00000539696 608 ntTSL 5 BASIC24.8■■□□□ 1.56
SH3D21A4FU49 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC24.8■■□□□ 1.56
SH3D21A4FU49 AC136428.2-201ENST00000563187 214 ntBASIC24.78■■□□□ 1.56
SH3D21A4FU49 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
SH3D21A4FU49 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
SH3D21A4FU49 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
SH3D21A4FU49 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
SH3D21A4FU49 SHF-206ENST00000560471 2499 ntTSL 5 BASIC24.77■■□□□ 1.56
SH3D21A4FU49 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
SH3D21A4FU49 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC24.76■■□□□ 1.55
SH3D21A4FU49 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC24.75■■□□□ 1.55
SH3D21A4FU49 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
SH3D21A4FU49 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
SH3D21A4FU49 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC24.71■■□□□ 1.55
SH3D21A4FU49 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
SH3D21A4FU49 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
SH3D21A4FU49 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
SH3D21A4FU49 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC24.69■■□□□ 1.54
SH3D21A4FU49 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC24.69■■□□□ 1.54
SH3D21A4FU49 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC24.68■■□□□ 1.54
SH3D21A4FU49 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC24.68■■□□□ 1.54
SH3D21A4FU49 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
SH3D21A4FU49 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC24.66■■□□□ 1.54
SH3D21A4FU49 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SH3D21A4FU49 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC24.65■■□□□ 1.54
SH3D21A4FU49 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
SH3D21A4FU49 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
SH3D21A4FU49 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC24.64■■□□□ 1.54
SH3D21A4FU49 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC24.64■■□□□ 1.54
SH3D21A4FU49 SUZ12P1-203ENST00000578195 985 ntBASIC24.64■■□□□ 1.54
SH3D21A4FU49 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC24.64■■□□□ 1.53
SH3D21A4FU49 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC24.64■■□□□ 1.53
SH3D21A4FU49 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
SH3D21A4FU49 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
SH3D21A4FU49 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC24.62■■□□□ 1.53
SH3D21A4FU49 AL161658.1-201ENST00000623641 1967 ntBASIC24.62■■□□□ 1.53
SH3D21A4FU49 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
SH3D21A4FU49 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
SH3D21A4FU49 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
SH3D21A4FU49 AC139426.1-201ENST00000568218 2529 ntBASIC24.6■■□□□ 1.53
SH3D21A4FU49 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
SH3D21A4FU49 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 135.5 ms