Protein–RNA interactions for Protein: A0A0B4J273

TRAV34, T-cell receptor alpha variable 34 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV34A0A0B4J273 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRAV34A0A0B4J273 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRAV34A0A0B4J273 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRAV34A0A0B4J273 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRAV34A0A0B4J273 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
TRAV34A0A0B4J273 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TRAV34A0A0B4J273 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC20.83■□□□□ 0.92
TRAV34A0A0B4J273 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TRAV34A0A0B4J273 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC20.82■□□□□ 0.92
TRAV34A0A0B4J273 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
TRAV34A0A0B4J273 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRAV34A0A0B4J273 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRAV34A0A0B4J273 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
TRAV34A0A0B4J273 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRAV34A0A0B4J273 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRAV34A0A0B4J273 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC20.8■□□□□ 0.92
TRAV34A0A0B4J273 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC20.78■□□□□ 0.92
TRAV34A0A0B4J273 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
TRAV34A0A0B4J273 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TRAV34A0A0B4J273 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
TRAV34A0A0B4J273 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRAV34A0A0B4J273 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRAV34A0A0B4J273 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRAV34A0A0B4J273 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRAV34A0A0B4J273 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRAV34A0A0B4J273 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRAV34A0A0B4J273 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
TRAV34A0A0B4J273 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
TRAV34A0A0B4J273 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRAV34A0A0B4J273 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
TRAV34A0A0B4J273 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRAV34A0A0B4J273 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRAV34A0A0B4J273 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRAV34A0A0B4J273 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRAV34A0A0B4J273 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRAV34A0A0B4J273 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRAV34A0A0B4J273 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC20.71■□□□□ 0.91
TRAV34A0A0B4J273 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRAV34A0A0B4J273 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
TRAV34A0A0B4J273 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRAV34A0A0B4J273 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRAV34A0A0B4J273 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRAV34A0A0B4J273 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRAV34A0A0B4J273 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC20.67■□□□□ 0.9
TRAV34A0A0B4J273 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRAV34A0A0B4J273 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRAV34A0A0B4J273 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
TRAV34A0A0B4J273 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC20.66■□□□□ 0.9
TRAV34A0A0B4J273 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRAV34A0A0B4J273 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC20.65■□□□□ 0.9
TRAV34A0A0B4J273 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRAV34A0A0B4J273 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRAV34A0A0B4J273 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TRAV34A0A0B4J273 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC20.64■□□□□ 0.89
TRAV34A0A0B4J273 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC20.63■□□□□ 0.89
TRAV34A0A0B4J273 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRAV34A0A0B4J273 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRAV34A0A0B4J273 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRAV34A0A0B4J273 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
TRAV34A0A0B4J273 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRAV34A0A0B4J273 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRAV34A0A0B4J273 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TRAV34A0A0B4J273 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
TRAV34A0A0B4J273 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
TRAV34A0A0B4J273 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRAV34A0A0B4J273 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRAV34A0A0B4J273 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TRAV34A0A0B4J273 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRAV34A0A0B4J273 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC20.56■□□□□ 0.88
TRAV34A0A0B4J273 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
TRAV34A0A0B4J273 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
TRAV34A0A0B4J273 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TRAV34A0A0B4J273 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
TRAV34A0A0B4J273 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
TRAV34A0A0B4J273 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRAV34A0A0B4J273 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRAV34A0A0B4J273 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRAV34A0A0B4J273 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRAV34A0A0B4J273 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC20.52■□□□□ 0.87
TRAV34A0A0B4J273 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRAV34A0A0B4J273 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRAV34A0A0B4J273 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRAV34A0A0B4J273 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
TRAV34A0A0B4J273 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC20.5■□□□□ 0.87
TRAV34A0A0B4J273 ST7-AS1-201ENST00000456775 1889 ntBASIC20.49■□□□□ 0.87
TRAV34A0A0B4J273 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC20.48■□□□□ 0.87
TRAV34A0A0B4J273 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRAV34A0A0B4J273 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRAV34A0A0B4J273 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRAV34A0A0B4J273 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRAV34A0A0B4J273 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
TRAV34A0A0B4J273 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TRAV34A0A0B4J273 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRAV34A0A0B4J273 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRAV34A0A0B4J273 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRAV34A0A0B4J273 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRAV34A0A0B4J273 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC20.46■□□□□ 0.87
TRAV34A0A0B4J273 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRAV34A0A0B4J273 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC20.46■□□□□ 0.87
TRAV34A0A0B4J273 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms