Protein–RNA interactions for Protein: A0A0B4J237

TRAV8-2, T-cell receptor alpha variable 8-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-2A0A0B4J237 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRAV8-2A0A0B4J237 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC20.55■□□□□ 0.88
TRAV8-2A0A0B4J237 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRAV8-2A0A0B4J237 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRAV8-2A0A0B4J237 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC20.54■□□□□ 0.88
TRAV8-2A0A0B4J237 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRAV8-2A0A0B4J237 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC20.49■□□□□ 0.87
TRAV8-2A0A0B4J237 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC20.49■□□□□ 0.87
TRAV8-2A0A0B4J237 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
TRAV8-2A0A0B4J237 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC20.49■□□□□ 0.87
TRAV8-2A0A0B4J237 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRAV8-2A0A0B4J237 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRAV8-2A0A0B4J237 ABCB10P1-201ENST00000614297 2181 ntBASIC20.46■□□□□ 0.87
TRAV8-2A0A0B4J237 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRAV8-2A0A0B4J237 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRAV8-2A0A0B4J237 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
TRAV8-2A0A0B4J237 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRAV8-2A0A0B4J237 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TRAV8-2A0A0B4J237 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC20.45■□□□□ 0.87
TRAV8-2A0A0B4J237 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRAV8-2A0A0B4J237 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRAV8-2A0A0B4J237 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC20.44■□□□□ 0.86
TRAV8-2A0A0B4J237 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC20.43■□□□□ 0.86
TRAV8-2A0A0B4J237 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRAV8-2A0A0B4J237 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC20.42■□□□□ 0.86
TRAV8-2A0A0B4J237 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC20.42■□□□□ 0.86
TRAV8-2A0A0B4J237 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TRAV8-2A0A0B4J237 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRAV8-2A0A0B4J237 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
TRAV8-2A0A0B4J237 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC20.4■□□□□ 0.86
TRAV8-2A0A0B4J237 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
TRAV8-2A0A0B4J237 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
TRAV8-2A0A0B4J237 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TRAV8-2A0A0B4J237 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC20.38■□□□□ 0.85
TRAV8-2A0A0B4J237 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC20.38■□□□□ 0.85
TRAV8-2A0A0B4J237 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRAV8-2A0A0B4J237 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
TRAV8-2A0A0B4J237 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRAV8-2A0A0B4J237 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRAV8-2A0A0B4J237 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC20.35■□□□□ 0.85
TRAV8-2A0A0B4J237 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRAV8-2A0A0B4J237 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TRAV8-2A0A0B4J237 AL161658.1-201ENST00000623641 1967 ntBASIC20.35■□□□□ 0.85
TRAV8-2A0A0B4J237 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRAV8-2A0A0B4J237 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TRAV8-2A0A0B4J237 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
TRAV8-2A0A0B4J237 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC20.33■□□□□ 0.85
TRAV8-2A0A0B4J237 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TRAV8-2A0A0B4J237 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC20.33■□□□□ 0.84
TRAV8-2A0A0B4J237 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TRAV8-2A0A0B4J237 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRAV8-2A0A0B4J237 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRAV8-2A0A0B4J237 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
TRAV8-2A0A0B4J237 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC20.32■□□□□ 0.84
TRAV8-2A0A0B4J237 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRAV8-2A0A0B4J237 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRAV8-2A0A0B4J237 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRAV8-2A0A0B4J237 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRAV8-2A0A0B4J237 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRAV8-2A0A0B4J237 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRAV8-2A0A0B4J237 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
TRAV8-2A0A0B4J237 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRAV8-2A0A0B4J237 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRAV8-2A0A0B4J237 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
TRAV8-2A0A0B4J237 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRAV8-2A0A0B4J237 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.84
TRAV8-2A0A0B4J237 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
TRAV8-2A0A0B4J237 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
TRAV8-2A0A0B4J237 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRAV8-2A0A0B4J237 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
TRAV8-2A0A0B4J237 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRAV8-2A0A0B4J237 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
TRAV8-2A0A0B4J237 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC20.25■□□□□ 0.83
TRAV8-2A0A0B4J237 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
TRAV8-2A0A0B4J237 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRAV8-2A0A0B4J237 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TRAV8-2A0A0B4J237 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRAV8-2A0A0B4J237 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TRAV8-2A0A0B4J237 ABCB10P3-201ENST00000561950 2166 ntBASIC20.24■□□□□ 0.83
TRAV8-2A0A0B4J237 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC20.23■□□□□ 0.83
TRAV8-2A0A0B4J237 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRAV8-2A0A0B4J237 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRAV8-2A0A0B4J237 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TRAV8-2A0A0B4J237 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRAV8-2A0A0B4J237 KLF16-203ENST00000592313 508 ntTSL 3 BASIC20.22■□□□□ 0.83
TRAV8-2A0A0B4J237 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRAV8-2A0A0B4J237 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRAV8-2A0A0B4J237 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
TRAV8-2A0A0B4J237 ST7-AS1-201ENST00000456775 1889 ntBASIC20.21■□□□□ 0.83
TRAV8-2A0A0B4J237 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRAV8-2A0A0B4J237 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRAV8-2A0A0B4J237 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TRAV8-2A0A0B4J237 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRAV8-2A0A0B4J237 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRAV8-2A0A0B4J237 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRAV8-2A0A0B4J237 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC20.2■□□□□ 0.82
TRAV8-2A0A0B4J237 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRAV8-2A0A0B4J237 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRAV8-2A0A0B4J237 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRAV8-2A0A0B4J237 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms