Protein–RNA interactions for Protein: A0A0A6YYK1

TRAV8-1, T-cell receptor alpha variable 8-1 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-1A0A0A6YYK1 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRAV8-1A0A0A6YYK1 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRAV8-1A0A0A6YYK1 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRAV8-1A0A0A6YYK1 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TRAV8-1A0A0A6YYK1 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRAV8-1A0A0A6YYK1 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRAV8-1A0A0A6YYK1 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRAV8-1A0A0A6YYK1 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
TRAV8-1A0A0A6YYK1 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRAV8-1A0A0A6YYK1 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
TRAV8-1A0A0A6YYK1 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRAV8-1A0A0A6YYK1 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC20.51■□□□□ 0.87
TRAV8-1A0A0A6YYK1 MVK-208ENST00000539696 608 ntTSL 5 BASIC20.5■□□□□ 0.87
TRAV8-1A0A0A6YYK1 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRAV8-1A0A0A6YYK1 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC20.48■□□□□ 0.87
TRAV8-1A0A0A6YYK1 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRAV8-1A0A0A6YYK1 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
TRAV8-1A0A0A6YYK1 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TRAV8-1A0A0A6YYK1 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TRAV8-1A0A0A6YYK1 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC20.45■□□□□ 0.86
TRAV8-1A0A0A6YYK1 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRAV8-1A0A0A6YYK1 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRAV8-1A0A0A6YYK1 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TRAV8-1A0A0A6YYK1 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRAV8-1A0A0A6YYK1 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRAV8-1A0A0A6YYK1 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRAV8-1A0A0A6YYK1 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRAV8-1A0A0A6YYK1 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRAV8-1A0A0A6YYK1 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRAV8-1A0A0A6YYK1 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
TRAV8-1A0A0A6YYK1 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRAV8-1A0A0A6YYK1 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC20.42■□□□□ 0.86
TRAV8-1A0A0A6YYK1 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRAV8-1A0A0A6YYK1 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRAV8-1A0A0A6YYK1 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRAV8-1A0A0A6YYK1 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TRAV8-1A0A0A6YYK1 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRAV8-1A0A0A6YYK1 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TRAV8-1A0A0A6YYK1 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC20.39■□□□□ 0.85
TRAV8-1A0A0A6YYK1 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRAV8-1A0A0A6YYK1 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
TRAV8-1A0A0A6YYK1 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC20.38■□□□□ 0.85
TRAV8-1A0A0A6YYK1 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRAV8-1A0A0A6YYK1 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TRAV8-1A0A0A6YYK1 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TRAV8-1A0A0A6YYK1 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
TRAV8-1A0A0A6YYK1 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRAV8-1A0A0A6YYK1 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC20.37■□□□□ 0.85
TRAV8-1A0A0A6YYK1 AC006077.2-201ENST00000623591 457 ntBASIC20.37■□□□□ 0.85
TRAV8-1A0A0A6YYK1 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC20.37■□□□□ 0.85
TRAV8-1A0A0A6YYK1 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRAV8-1A0A0A6YYK1 ST7-AS1-201ENST00000456775 1889 ntBASIC20.36■□□□□ 0.85
TRAV8-1A0A0A6YYK1 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRAV8-1A0A0A6YYK1 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
TRAV8-1A0A0A6YYK1 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TRAV8-1A0A0A6YYK1 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
TRAV8-1A0A0A6YYK1 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRAV8-1A0A0A6YYK1 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRAV8-1A0A0A6YYK1 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRAV8-1A0A0A6YYK1 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRAV8-1A0A0A6YYK1 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRAV8-1A0A0A6YYK1 AL161658.1-201ENST00000623641 1967 ntBASIC20.33■□□□□ 0.84
TRAV8-1A0A0A6YYK1 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
TRAV8-1A0A0A6YYK1 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRAV8-1A0A0A6YYK1 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC20.32■□□□□ 0.84
TRAV8-1A0A0A6YYK1 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC20.32■□□□□ 0.84
TRAV8-1A0A0A6YYK1 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRAV8-1A0A0A6YYK1 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC20.31■□□□□ 0.84
TRAV8-1A0A0A6YYK1 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRAV8-1A0A0A6YYK1 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC20.31■□□□□ 0.84
TRAV8-1A0A0A6YYK1 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
TRAV8-1A0A0A6YYK1 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRAV8-1A0A0A6YYK1 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC20.3■□□□□ 0.84
TRAV8-1A0A0A6YYK1 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRAV8-1A0A0A6YYK1 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRAV8-1A0A0A6YYK1 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRAV8-1A0A0A6YYK1 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC20.29■□□□□ 0.84
TRAV8-1A0A0A6YYK1 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRAV8-1A0A0A6YYK1 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
TRAV8-1A0A0A6YYK1 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRAV8-1A0A0A6YYK1 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
TRAV8-1A0A0A6YYK1 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRAV8-1A0A0A6YYK1 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRAV8-1A0A0A6YYK1 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TRAV8-1A0A0A6YYK1 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TRAV8-1A0A0A6YYK1 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TRAV8-1A0A0A6YYK1 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRAV8-1A0A0A6YYK1 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TRAV8-1A0A0A6YYK1 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRAV8-1A0A0A6YYK1 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRAV8-1A0A0A6YYK1 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRAV8-1A0A0A6YYK1 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRAV8-1A0A0A6YYK1 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
TRAV8-1A0A0A6YYK1 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRAV8-1A0A0A6YYK1 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC20.21■□□□□ 0.83
TRAV8-1A0A0A6YYK1 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC20.21■□□□□ 0.83
TRAV8-1A0A0A6YYK1 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRAV8-1A0A0A6YYK1 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC20.21■□□□□ 0.83
TRAV8-1A0A0A6YYK1 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRAV8-1A0A0A6YYK1 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms