Protein–RNA interactions for Protein: Q9Y5G6

PCDHGA7, Protocadherin gamma-A7, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA7Q9Y5G6 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC27.51■■□□□ 1.99
PCDHGA7Q9Y5G6 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC27.5■■□□□ 1.99
PCDHGA7Q9Y5G6 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC27.5■■□□□ 1.99
PCDHGA7Q9Y5G6 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC27.5■■□□□ 1.99
PCDHGA7Q9Y5G6 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC27.49■■□□□ 1.99
PCDHGA7Q9Y5G6 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC27.49■■□□□ 1.99
PCDHGA7Q9Y5G6 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC27.49■■□□□ 1.99
PCDHGA7Q9Y5G6 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
PCDHGA7Q9Y5G6 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC27.47■■□□□ 1.99
PCDHGA7Q9Y5G6 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
PCDHGA7Q9Y5G6 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC27.46■■□□□ 1.99
PCDHGA7Q9Y5G6 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC27.46■■□□□ 1.99
PCDHGA7Q9Y5G6 AC097358.2-201ENST00000607541 1159 ntBASIC27.46■■□□□ 1.99
PCDHGA7Q9Y5G6 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
PCDHGA7Q9Y5G6 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
PCDHGA7Q9Y5G6 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC27.41■■□□□ 1.98
PCDHGA7Q9Y5G6 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC27.39■■□□□ 1.98
PCDHGA7Q9Y5G6 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
PCDHGA7Q9Y5G6 SETD8P1-201ENST00000623146 1180 ntBASIC27.39■■□□□ 1.98
PCDHGA7Q9Y5G6 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC27.38■■□□□ 1.97
PCDHGA7Q9Y5G6 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
PCDHGA7Q9Y5G6 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC27.36■■□□□ 1.97
PCDHGA7Q9Y5G6 AC136428.2-201ENST00000563187 214 ntBASIC27.36■■□□□ 1.97
PCDHGA7Q9Y5G6 KLF16-203ENST00000592313 508 ntTSL 3 BASIC27.36■■□□□ 1.97
PCDHGA7Q9Y5G6 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC27.35■■□□□ 1.97
PCDHGA7Q9Y5G6 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
PCDHGA7Q9Y5G6 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
PCDHGA7Q9Y5G6 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC27.34■■□□□ 1.97
PCDHGA7Q9Y5G6 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
PCDHGA7Q9Y5G6 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
PCDHGA7Q9Y5G6 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
PCDHGA7Q9Y5G6 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC27.32■■□□□ 1.96
PCDHGA7Q9Y5G6 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC27.31■■□□□ 1.96
PCDHGA7Q9Y5G6 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC27.29■■□□□ 1.96
PCDHGA7Q9Y5G6 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC27.29■■□□□ 1.96
PCDHGA7Q9Y5G6 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
PCDHGA7Q9Y5G6 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
PCDHGA7Q9Y5G6 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
PCDHGA7Q9Y5G6 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC27.28■■□□□ 1.96
PCDHGA7Q9Y5G6 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
PCDHGA7Q9Y5G6 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
PCDHGA7Q9Y5G6 SUZ12P1-203ENST00000578195 985 ntBASIC27.25■■□□□ 1.95
PCDHGA7Q9Y5G6 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
PCDHGA7Q9Y5G6 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
PCDHGA7Q9Y5G6 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
PCDHGA7Q9Y5G6 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
PCDHGA7Q9Y5G6 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
PCDHGA7Q9Y5G6 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC27.21■■□□□ 1.95
PCDHGA7Q9Y5G6 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
PCDHGA7Q9Y5G6 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC27.2■■□□□ 1.94
PCDHGA7Q9Y5G6 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC27.18■■□□□ 1.94
PCDHGA7Q9Y5G6 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC27.18■■□□□ 1.94
PCDHGA7Q9Y5G6 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
PCDHGA7Q9Y5G6 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
PCDHGA7Q9Y5G6 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC27.16■■□□□ 1.94
PCDHGA7Q9Y5G6 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC27.16■■□□□ 1.94
PCDHGA7Q9Y5G6 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
PCDHGA7Q9Y5G6 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
PCDHGA7Q9Y5G6 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
PCDHGA7Q9Y5G6 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
PCDHGA7Q9Y5G6 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC27.15■■□□□ 1.94
PCDHGA7Q9Y5G6 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
PCDHGA7Q9Y5G6 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC27.14■■□□□ 1.94
PCDHGA7Q9Y5G6 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC27.14■■□□□ 1.94
PCDHGA7Q9Y5G6 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
PCDHGA7Q9Y5G6 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC27.11■■□□□ 1.93
PCDHGA7Q9Y5G6 RPS2P35-201ENST00000443417 897 ntBASIC27.1■■□□□ 1.93
PCDHGA7Q9Y5G6 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC27.1■■□□□ 1.93
PCDHGA7Q9Y5G6 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
PCDHGA7Q9Y5G6 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC27.09■■□□□ 1.93
PCDHGA7Q9Y5G6 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC27.08■■□□□ 1.93
PCDHGA7Q9Y5G6 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
PCDHGA7Q9Y5G6 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC27.08■■□□□ 1.93
PCDHGA7Q9Y5G6 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC27.07■■□□□ 1.92
PCDHGA7Q9Y5G6 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC27.07■■□□□ 1.92
PCDHGA7Q9Y5G6 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
PCDHGA7Q9Y5G6 MVK-208ENST00000539696 608 ntTSL 5 BASIC27.06■■□□□ 1.92
PCDHGA7Q9Y5G6 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC27.06■■□□□ 1.92
PCDHGA7Q9Y5G6 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
PCDHGA7Q9Y5G6 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC27.05■■□□□ 1.92
PCDHGA7Q9Y5G6 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
PCDHGA7Q9Y5G6 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC27.02■■□□□ 1.92
PCDHGA7Q9Y5G6 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC27.02■■□□□ 1.92
PCDHGA7Q9Y5G6 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC27.02■■□□□ 1.92
PCDHGA7Q9Y5G6 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.92
PCDHGA7Q9Y5G6 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC27.01■■□□□ 1.91
PCDHGA7Q9Y5G6 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC27.01■■□□□ 1.91
PCDHGA7Q9Y5G6 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
PCDHGA7Q9Y5G6 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
PCDHGA7Q9Y5G6 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
PCDHGA7Q9Y5G6 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
PCDHGA7Q9Y5G6 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
PCDHGA7Q9Y5G6 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
PCDHGA7Q9Y5G6 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
PCDHGA7Q9Y5G6 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
PCDHGA7Q9Y5G6 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
PCDHGA7Q9Y5G6 CAHM-201ENST00000604200 896 ntBASIC26.91■■□□□ 1.9
PCDHGA7Q9Y5G6 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
PCDHGA7Q9Y5G6 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC26.87■■□□□ 1.89
PCDHGA7Q9Y5G6 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms