Protein–RNA interactions for Protein: A0A0B4J264

TRAV38-1, T-cell receptor alpha variable 38-1 (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV38-1A0A0B4J264 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC23.34■■□□□ 1.33
TRAV38-1A0A0B4J264 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
TRAV38-1A0A0B4J264 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
TRAV38-1A0A0B4J264 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TRAV38-1A0A0B4J264 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
TRAV38-1A0A0B4J264 KLF16-203ENST00000592313 508 ntTSL 3 BASIC23.29■■□□□ 1.32
TRAV38-1A0A0B4J264 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TRAV38-1A0A0B4J264 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TRAV38-1A0A0B4J264 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC23.27■■□□□ 1.32
TRAV38-1A0A0B4J264 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
TRAV38-1A0A0B4J264 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC23.24■■□□□ 1.31
TRAV38-1A0A0B4J264 RARRES2P7-201ENST00000567349 469 ntBASIC23.24■■□□□ 1.31
TRAV38-1A0A0B4J264 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
TRAV38-1A0A0B4J264 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC23.22■■□□□ 1.31
TRAV38-1A0A0B4J264 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
TRAV38-1A0A0B4J264 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC23.21■■□□□ 1.31
TRAV38-1A0A0B4J264 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
TRAV38-1A0A0B4J264 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC23.2■■□□□ 1.3
TRAV38-1A0A0B4J264 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
TRAV38-1A0A0B4J264 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC23.19■■□□□ 1.3
TRAV38-1A0A0B4J264 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TRAV38-1A0A0B4J264 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TRAV38-1A0A0B4J264 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC23.18■■□□□ 1.3
TRAV38-1A0A0B4J264 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
TRAV38-1A0A0B4J264 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TRAV38-1A0A0B4J264 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TRAV38-1A0A0B4J264 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TRAV38-1A0A0B4J264 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
TRAV38-1A0A0B4J264 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
TRAV38-1A0A0B4J264 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC23.14■■□□□ 1.3
TRAV38-1A0A0B4J264 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC23.14■■□□□ 1.29
TRAV38-1A0A0B4J264 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC23.13■■□□□ 1.29
TRAV38-1A0A0B4J264 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC23.12■■□□□ 1.29
TRAV38-1A0A0B4J264 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
TRAV38-1A0A0B4J264 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
TRAV38-1A0A0B4J264 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
TRAV38-1A0A0B4J264 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC23.1■■□□□ 1.29
TRAV38-1A0A0B4J264 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
TRAV38-1A0A0B4J264 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
TRAV38-1A0A0B4J264 SETD8P1-201ENST00000623146 1180 ntBASIC23.09■■□□□ 1.29
TRAV38-1A0A0B4J264 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC23.08■■□□□ 1.29
TRAV38-1A0A0B4J264 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
TRAV38-1A0A0B4J264 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
TRAV38-1A0A0B4J264 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
TRAV38-1A0A0B4J264 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
TRAV38-1A0A0B4J264 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC23.07■■□□□ 1.28
TRAV38-1A0A0B4J264 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TRAV38-1A0A0B4J264 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
TRAV38-1A0A0B4J264 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
TRAV38-1A0A0B4J264 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
TRAV38-1A0A0B4J264 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TRAV38-1A0A0B4J264 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
TRAV38-1A0A0B4J264 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TRAV38-1A0A0B4J264 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
TRAV38-1A0A0B4J264 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
TRAV38-1A0A0B4J264 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TRAV38-1A0A0B4J264 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TRAV38-1A0A0B4J264 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC23.01■■□□□ 1.27
TRAV38-1A0A0B4J264 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
TRAV38-1A0A0B4J264 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TRAV38-1A0A0B4J264 AL133380.1-201ENST00000506013 324 ntBASIC22.98■■□□□ 1.27
TRAV38-1A0A0B4J264 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC22.98■■□□□ 1.27
TRAV38-1A0A0B4J264 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
TRAV38-1A0A0B4J264 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
TRAV38-1A0A0B4J264 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC22.96■■□□□ 1.27
TRAV38-1A0A0B4J264 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
TRAV38-1A0A0B4J264 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
TRAV38-1A0A0B4J264 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC22.95■■□□□ 1.26
TRAV38-1A0A0B4J264 AC097358.2-201ENST00000607541 1159 ntBASIC22.95■■□□□ 1.26
TRAV38-1A0A0B4J264 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
TRAV38-1A0A0B4J264 ST7-205ENST00000393446 2114 ntTSL 5 BASIC22.94■■□□□ 1.26
TRAV38-1A0A0B4J264 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC22.92■■□□□ 1.26
TRAV38-1A0A0B4J264 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
TRAV38-1A0A0B4J264 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
TRAV38-1A0A0B4J264 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
TRAV38-1A0A0B4J264 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
TRAV38-1A0A0B4J264 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
TRAV38-1A0A0B4J264 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC22.9■■□□□ 1.26
TRAV38-1A0A0B4J264 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC22.9■■□□□ 1.26
TRAV38-1A0A0B4J264 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC22.89■■□□□ 1.26
TRAV38-1A0A0B4J264 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
TRAV38-1A0A0B4J264 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC22.89■■□□□ 1.25
TRAV38-1A0A0B4J264 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC22.89■■□□□ 1.25
TRAV38-1A0A0B4J264 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
TRAV38-1A0A0B4J264 AC136428.2-201ENST00000563187 214 ntBASIC22.88■■□□□ 1.25
TRAV38-1A0A0B4J264 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC22.88■■□□□ 1.25
TRAV38-1A0A0B4J264 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
TRAV38-1A0A0B4J264 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
TRAV38-1A0A0B4J264 ST7-202ENST00000323984 2142 ntTSL 5 BASIC22.87■■□□□ 1.25
TRAV38-1A0A0B4J264 ST7-207ENST00000393449 2127 ntTSL 5 BASIC22.87■■□□□ 1.25
TRAV38-1A0A0B4J264 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
TRAV38-1A0A0B4J264 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC22.87■■□□□ 1.25
TRAV38-1A0A0B4J264 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC22.86■■□□□ 1.25
TRAV38-1A0A0B4J264 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
TRAV38-1A0A0B4J264 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
TRAV38-1A0A0B4J264 AC120057.4-201ENST00000624722 1615 ntBASIC22.86■■□□□ 1.25
TRAV38-1A0A0B4J264 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC22.84■■□□□ 1.25
TRAV38-1A0A0B4J264 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC22.84■■□□□ 1.25
TRAV38-1A0A0B4J264 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
TRAV38-1A0A0B4J264 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms