Protein–RNA interactions for Protein: A0A087WT03

TRAV26-1, T-cell receptor alpha variable 26-1 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV26-1A0A087WT03 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV26-1A0A087WT03 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV26-1A0A087WT03 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC19.74■□□□□ 0.75
TRAV26-1A0A087WT03 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC19.74■□□□□ 0.75
TRAV26-1A0A087WT03 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV26-1A0A087WT03 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC19.73■□□□□ 0.75
TRAV26-1A0A087WT03 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC19.73■□□□□ 0.75
TRAV26-1A0A087WT03 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRAV26-1A0A087WT03 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRAV26-1A0A087WT03 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV26-1A0A087WT03 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV26-1A0A087WT03 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
TRAV26-1A0A087WT03 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
TRAV26-1A0A087WT03 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRAV26-1A0A087WT03 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRAV26-1A0A087WT03 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRAV26-1A0A087WT03 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
TRAV26-1A0A087WT03 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC19.69■□□□□ 0.74
TRAV26-1A0A087WT03 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC19.68■□□□□ 0.74
TRAV26-1A0A087WT03 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRAV26-1A0A087WT03 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRAV26-1A0A087WT03 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRAV26-1A0A087WT03 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRAV26-1A0A087WT03 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRAV26-1A0A087WT03 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC19.63■□□□□ 0.73
TRAV26-1A0A087WT03 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRAV26-1A0A087WT03 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRAV26-1A0A087WT03 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV26-1A0A087WT03 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC19.61■□□□□ 0.73
TRAV26-1A0A087WT03 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV26-1A0A087WT03 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC19.59■□□□□ 0.73
TRAV26-1A0A087WT03 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TRAV26-1A0A087WT03 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC19.58■□□□□ 0.72
TRAV26-1A0A087WT03 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV26-1A0A087WT03 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
TRAV26-1A0A087WT03 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC19.57■□□□□ 0.72
TRAV26-1A0A087WT03 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAV26-1A0A087WT03 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRAV26-1A0A087WT03 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRAV26-1A0A087WT03 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRAV26-1A0A087WT03 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC19.54■□□□□ 0.72
TRAV26-1A0A087WT03 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRAV26-1A0A087WT03 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC19.54■□□□□ 0.72
TRAV26-1A0A087WT03 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRAV26-1A0A087WT03 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRAV26-1A0A087WT03 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRAV26-1A0A087WT03 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRAV26-1A0A087WT03 KLF16-203ENST00000592313 508 ntTSL 3 BASIC19.52■□□□□ 0.72
TRAV26-1A0A087WT03 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRAV26-1A0A087WT03 RARRES2P7-201ENST00000567349 469 ntBASIC19.5■□□□□ 0.71
TRAV26-1A0A087WT03 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRAV26-1A0A087WT03 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC19.5■□□□□ 0.71
TRAV26-1A0A087WT03 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
TRAV26-1A0A087WT03 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRAV26-1A0A087WT03 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRAV26-1A0A087WT03 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRAV26-1A0A087WT03 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRAV26-1A0A087WT03 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
TRAV26-1A0A087WT03 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC19.47■□□□□ 0.71
TRAV26-1A0A087WT03 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC19.46■□□□□ 0.71
TRAV26-1A0A087WT03 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
TRAV26-1A0A087WT03 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC19.45■□□□□ 0.7
TRAV26-1A0A087WT03 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRAV26-1A0A087WT03 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC19.44■□□□□ 0.7
TRAV26-1A0A087WT03 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRAV26-1A0A087WT03 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRAV26-1A0A087WT03 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC19.43■□□□□ 0.7
TRAV26-1A0A087WT03 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRAV26-1A0A087WT03 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC19.42■□□□□ 0.7
TRAV26-1A0A087WT03 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV26-1A0A087WT03 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC19.42■□□□□ 0.7
TRAV26-1A0A087WT03 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV26-1A0A087WT03 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV26-1A0A087WT03 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC19.41■□□□□ 0.7
TRAV26-1A0A087WT03 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV26-1A0A087WT03 AC135731.1-201ENST00000569415 2548 ntBASIC19.41■□□□□ 0.7
TRAV26-1A0A087WT03 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC19.4■□□□□ 0.7
TRAV26-1A0A087WT03 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC19.39■□□□□ 0.7
TRAV26-1A0A087WT03 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
TRAV26-1A0A087WT03 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRAV26-1A0A087WT03 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRAV26-1A0A087WT03 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV26-1A0A087WT03 SETD8P1-201ENST00000623146 1180 ntBASIC19.37■□□□□ 0.69
TRAV26-1A0A087WT03 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
TRAV26-1A0A087WT03 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRAV26-1A0A087WT03 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRAV26-1A0A087WT03 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRAV26-1A0A087WT03 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC19.34■□□□□ 0.69
TRAV26-1A0A087WT03 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRAV26-1A0A087WT03 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TRAV26-1A0A087WT03 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TRAV26-1A0A087WT03 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRAV26-1A0A087WT03 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC19.32■□□□□ 0.68
TRAV26-1A0A087WT03 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRAV26-1A0A087WT03 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC19.31■□□□□ 0.68
TRAV26-1A0A087WT03 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRAV26-1A0A087WT03 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRAV26-1A0A087WT03 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRAV26-1A0A087WT03 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRAV26-1A0A087WT03 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms