Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC27.76■■■□□ 2.03
PCDHGA11Q9Y5H2 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC27.72■■■□□ 2.03
PCDHGA11Q9Y5H2 AC006077.2-201ENST00000623591 457 ntBASIC27.72■■■□□ 2.03
PCDHGA11Q9Y5H2 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
PCDHGA11Q9Y5H2 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
PCDHGA11Q9Y5H2 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
PCDHGA11Q9Y5H2 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
PCDHGA11Q9Y5H2 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC27.66■■■□□ 2.02
PCDHGA11Q9Y5H2 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
PCDHGA11Q9Y5H2 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
PCDHGA11Q9Y5H2 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC27.62■■■□□ 2.01
PCDHGA11Q9Y5H2 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
PCDHGA11Q9Y5H2 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC27.59■■■□□ 2.01
PCDHGA11Q9Y5H2 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
PCDHGA11Q9Y5H2 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC27.59■■■□□ 2.01
PCDHGA11Q9Y5H2 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC27.58■■■□□ 2.01
PCDHGA11Q9Y5H2 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC27.57■■■□□ 2
PCDHGA11Q9Y5H2 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
PCDHGA11Q9Y5H2 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC27.54■■■□□ 2
PCDHGA11Q9Y5H2 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC27.53■■■□□ 2
PCDHGA11Q9Y5H2 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC27.53■■■□□ 2
PCDHGA11Q9Y5H2 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
PCDHGA11Q9Y5H2 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
PCDHGA11Q9Y5H2 ZNRF2P1-201ENST00000441407 443 ntBASIC27.51■■□□□ 1.99
PCDHGA11Q9Y5H2 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
PCDHGA11Q9Y5H2 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC27.5■■□□□ 1.99
PCDHGA11Q9Y5H2 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
PCDHGA11Q9Y5H2 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
PCDHGA11Q9Y5H2 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
PCDHGA11Q9Y5H2 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC27.45■■□□□ 1.99
PCDHGA11Q9Y5H2 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
PCDHGA11Q9Y5H2 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC27.42■■□□□ 1.98
PCDHGA11Q9Y5H2 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC27.41■■□□□ 1.98
PCDHGA11Q9Y5H2 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC27.4■■□□□ 1.98
PCDHGA11Q9Y5H2 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
PCDHGA11Q9Y5H2 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
PCDHGA11Q9Y5H2 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
PCDHGA11Q9Y5H2 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC27.33■■□□□ 1.96
PCDHGA11Q9Y5H2 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
PCDHGA11Q9Y5H2 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC27.32■■□□□ 1.96
PCDHGA11Q9Y5H2 ST7-205ENST00000393446 2114 ntTSL 5 BASIC27.31■■□□□ 1.96
PCDHGA11Q9Y5H2 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC27.31■■□□□ 1.96
PCDHGA11Q9Y5H2 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
PCDHGA11Q9Y5H2 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC27.3■■□□□ 1.96
PCDHGA11Q9Y5H2 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC27.29■■□□□ 1.96
PCDHGA11Q9Y5H2 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
PCDHGA11Q9Y5H2 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC27.29■■□□□ 1.96
PCDHGA11Q9Y5H2 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
PCDHGA11Q9Y5H2 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
PCDHGA11Q9Y5H2 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC27.24■■□□□ 1.95
PCDHGA11Q9Y5H2 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC27.23■■□□□ 1.95
PCDHGA11Q9Y5H2 ST7-202ENST00000323984 2142 ntTSL 5 BASIC27.23■■□□□ 1.95
PCDHGA11Q9Y5H2 ST7-207ENST00000393449 2127 ntTSL 5 BASIC27.23■■□□□ 1.95
PCDHGA11Q9Y5H2 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
PCDHGA11Q9Y5H2 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
PCDHGA11Q9Y5H2 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC27.21■■□□□ 1.95
PCDHGA11Q9Y5H2 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC27.21■■□□□ 1.95
PCDHGA11Q9Y5H2 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC27.2■■□□□ 1.94
PCDHGA11Q9Y5H2 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
PCDHGA11Q9Y5H2 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
PCDHGA11Q9Y5H2 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
PCDHGA11Q9Y5H2 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC27.17■■□□□ 1.94
PCDHGA11Q9Y5H2 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
PCDHGA11Q9Y5H2 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
PCDHGA11Q9Y5H2 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC27.16■■□□□ 1.94
PCDHGA11Q9Y5H2 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC27.15■■□□□ 1.94
PCDHGA11Q9Y5H2 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC27.14■■□□□ 1.93
PCDHGA11Q9Y5H2 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC27.13■■□□□ 1.93
PCDHGA11Q9Y5H2 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
PCDHGA11Q9Y5H2 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
PCDHGA11Q9Y5H2 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC27.08■■□□□ 1.93
PCDHGA11Q9Y5H2 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
PCDHGA11Q9Y5H2 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
PCDHGA11Q9Y5H2 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC27.07■■□□□ 1.92
PCDHGA11Q9Y5H2 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC27.06■■□□□ 1.92
PCDHGA11Q9Y5H2 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC27.04■■□□□ 1.92
PCDHGA11Q9Y5H2 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC27.04■■□□□ 1.92
PCDHGA11Q9Y5H2 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
PCDHGA11Q9Y5H2 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC27.01■■□□□ 1.91
PCDHGA11Q9Y5H2 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC27■■□□□ 1.91
PCDHGA11Q9Y5H2 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC27■■□□□ 1.91
PCDHGA11Q9Y5H2 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
PCDHGA11Q9Y5H2 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC26.98■■□□□ 1.91
PCDHGA11Q9Y5H2 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
PCDHGA11Q9Y5H2 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
PCDHGA11Q9Y5H2 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC26.97■■□□□ 1.91
PCDHGA11Q9Y5H2 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
PCDHGA11Q9Y5H2 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC26.95■■□□□ 1.9
PCDHGA11Q9Y5H2 MVK-208ENST00000539696 608 ntTSL 5 BASIC26.95■■□□□ 1.9
PCDHGA11Q9Y5H2 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC26.95■■□□□ 1.9
PCDHGA11Q9Y5H2 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC26.94■■□□□ 1.9
PCDHGA11Q9Y5H2 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
PCDHGA11Q9Y5H2 DYNLL1-208ENST00000550178 581 ntBASIC26.94■■□□□ 1.9
PCDHGA11Q9Y5H2 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
PCDHGA11Q9Y5H2 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC26.94■■□□□ 1.9
PCDHGA11Q9Y5H2 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
PCDHGA11Q9Y5H2 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
PCDHGA11Q9Y5H2 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
PCDHGA11Q9Y5H2 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC26.92■■□□□ 1.9
PCDHGA11Q9Y5H2 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC26.91■■□□□ 1.9
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms