Protein–RNA interactions for Protein: Q9H3M0

KCNF1, Potassium voltage-gated channel subfamily F member 1, humanhuman

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNF1Q9H3M0 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC32.09■■■□□ 2.73
KCNF1Q9H3M0 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
KCNF1Q9H3M0 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
KCNF1Q9H3M0 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC32.06■■■□□ 2.72
KCNF1Q9H3M0 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
KCNF1Q9H3M0 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC32.05■■■□□ 2.72
KCNF1Q9H3M0 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
KCNF1Q9H3M0 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC32.02■■■□□ 2.72
KCNF1Q9H3M0 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC32.01■■■□□ 2.71
KCNF1Q9H3M0 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC31.99■■■□□ 2.71
KCNF1Q9H3M0 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
KCNF1Q9H3M0 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
KCNF1Q9H3M0 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC31.93■■■□□ 2.7
KCNF1Q9H3M0 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
KCNF1Q9H3M0 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC31.89■■■□□ 2.7
KCNF1Q9H3M0 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
KCNF1Q9H3M0 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
KCNF1Q9H3M0 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
KCNF1Q9H3M0 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC31.81■■■□□ 2.68
KCNF1Q9H3M0 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
KCNF1Q9H3M0 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC31.8■■■□□ 2.68
KCNF1Q9H3M0 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC31.8■■■□□ 2.68
KCNF1Q9H3M0 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
KCNF1Q9H3M0 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
KCNF1Q9H3M0 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC31.73■■■□□ 2.67
KCNF1Q9H3M0 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC31.72■■■□□ 2.67
KCNF1Q9H3M0 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
KCNF1Q9H3M0 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
KCNF1Q9H3M0 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
KCNF1Q9H3M0 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC31.71■■■□□ 2.67
KCNF1Q9H3M0 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
KCNF1Q9H3M0 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
KCNF1Q9H3M0 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC31.65■■■□□ 2.66
KCNF1Q9H3M0 AC145285.7-201ENST00000614819 1539 ntBASIC31.64■■■□□ 2.66
KCNF1Q9H3M0 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC31.63■■■□□ 2.65
KCNF1Q9H3M0 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
KCNF1Q9H3M0 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
KCNF1Q9H3M0 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC31.55■■■□□ 2.64
KCNF1Q9H3M0 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC31.55■■■□□ 2.64
KCNF1Q9H3M0 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC31.53■■■□□ 2.64
KCNF1Q9H3M0 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
KCNF1Q9H3M0 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
KCNF1Q9H3M0 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
KCNF1Q9H3M0 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC31.49■■■□□ 2.63
KCNF1Q9H3M0 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
KCNF1Q9H3M0 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC31.45■■■□□ 2.63
KCNF1Q9H3M0 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
KCNF1Q9H3M0 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC31.36■■■□□ 2.61
KCNF1Q9H3M0 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC31.35■■■□□ 2.61
KCNF1Q9H3M0 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC31.34■■■□□ 2.61
KCNF1Q9H3M0 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
KCNF1Q9H3M0 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
KCNF1Q9H3M0 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
KCNF1Q9H3M0 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC31.31■■■□□ 2.6
KCNF1Q9H3M0 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
KCNF1Q9H3M0 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC31.29■■■□□ 2.6
KCNF1Q9H3M0 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC31.29■■■□□ 2.6
KCNF1Q9H3M0 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
KCNF1Q9H3M0 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
KCNF1Q9H3M0 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC31.26■■■□□ 2.59
KCNF1Q9H3M0 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
KCNF1Q9H3M0 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
KCNF1Q9H3M0 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC31.22■■■□□ 2.59
KCNF1Q9H3M0 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC31.22■■■□□ 2.59
KCNF1Q9H3M0 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
KCNF1Q9H3M0 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
KCNF1Q9H3M0 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC31.2■■■□□ 2.59
KCNF1Q9H3M0 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
KCNF1Q9H3M0 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC31.19■■■□□ 2.58
KCNF1Q9H3M0 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
KCNF1Q9H3M0 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
KCNF1Q9H3M0 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
KCNF1Q9H3M0 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
KCNF1Q9H3M0 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC31.14■■■□□ 2.58
KCNF1Q9H3M0 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
KCNF1Q9H3M0 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
KCNF1Q9H3M0 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC31.11■■■□□ 2.57
KCNF1Q9H3M0 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
KCNF1Q9H3M0 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC31.08■■■□□ 2.57
KCNF1Q9H3M0 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC31.07■■■□□ 2.56
KCNF1Q9H3M0 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC31.05■■■□□ 2.56
KCNF1Q9H3M0 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC31.04■■■□□ 2.56
KCNF1Q9H3M0 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
KCNF1Q9H3M0 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
KCNF1Q9H3M0 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
KCNF1Q9H3M0 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
KCNF1Q9H3M0 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
KCNF1Q9H3M0 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
KCNF1Q9H3M0 ABCB10P1-201ENST00000614297 2181 ntBASIC30.96■■■□□ 2.55
KCNF1Q9H3M0 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC30.95■■■□□ 2.54
KCNF1Q9H3M0 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
KCNF1Q9H3M0 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
KCNF1Q9H3M0 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC30.89■■■□□ 2.54
KCNF1Q9H3M0 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.53
KCNF1Q9H3M0 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
KCNF1Q9H3M0 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
KCNF1Q9H3M0 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
KCNF1Q9H3M0 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
KCNF1Q9H3M0 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
KCNF1Q9H3M0 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC30.79■■■□□ 2.52
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms